RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-208ENST00000578178 NKX2-3Q8TAU0 364 aa12.97□□□□□ -0.33
PPP4R1-208ENST00000578178 TRIB2Q92519 343 aa12.97□□□□□ -0.33
PPP4R1-208ENST00000578178 USP6NLQ92738 828 aa12.97□□□□□ -0.33
PPP4R1-208ENST00000578178 SHISA4Q96DD7 197 aa12.97□□□□□ -0.33
PPP4R1-208ENST00000578178 SPATC1LQ9H0A9 340 aa12.97□□□□□ -0.33
PPP4R1-208ENST00000578178 RNF208Q9H0X6 261 aa12.97□□□□□ -0.33
PPP4R1-208ENST00000578178 UNC93B1Q9H1C4 597 aa12.97□□□□□ -0.33
PPP4R1-208ENST00000578178 FBXO28Q9NVF7 368 aa12.97□□□□□ -0.33
PPP4R1-208ENST00000578178 IVNS1ABPQ9Y6Y0 642 aa12.97□□□□□ -0.33
PPP4R1-208ENST00000578178 F5H6K3 240 aa12.96□□□□□ -0.33
PPP4R1-208ENST00000578178 ORC4O43929 436 aa12.96□□□□□ -0.33
PPP4R1-208ENST00000578178 GSPT1P15170 499 aaKnown RBP12.96□□□□□ -0.33
PPP4R1-208ENST00000578178 ZKSCAN1P17029 563 aaPredicted RBP12.96□□□□□ -0.33
PPP4R1-208ENST00000578178 GJA8P48165 433 aa12.96□□□□□ -0.33
PPP4R1-208ENST00000578178 KLRC3Q07444 240 aa12.96□□□□□ -0.33
PPP4R1-208ENST00000578178 MAP2K5Q13163 448 aa12.96□□□□□ -0.33
PPP4R1-208ENST00000578178 GRB14Q14449 540 aa12.96□□□□□ -0.33
PPP4R1-208ENST00000578178 PPP4R3BQ5MIZ7 849 aa12.96□□□□□ -0.33
PPP4R1-208ENST00000578178 SAMD1Q6SPF0 538 aaPredicted RBP12.96□□□□□ -0.33
PPP4R1-208ENST00000578178 CWC27Q6UX04 472 aaKnown RBP12.96□□□□□ -0.33
PPP4R1-208ENST00000578178 TRMT44Q8IYL2 757 aaKnown RBP12.96□□□□□ -0.33
PPP4R1-208ENST00000578178 GMCL1P1Q8NEA9 526 aa12.96□□□□□ -0.33
PPP4R1-208ENST00000578178 SHCBP1Q8NEM2 672 aa12.96□□□□□ -0.33
PPP4R1-208ENST00000578178 MKL1Q969V6 931 aa12.96□□□□□ -0.33
PPP4R1-208ENST00000578178 NUP88Q99567 741 aaPredicted RBP12.96□□□□□ -0.33
PPP4R1-208ENST00000578178 MOV10L1Q9BXT6 1211 aaKnown RBP12.96□□□□□ -0.33
PPP4R1-208ENST00000578178 CLIP2Q9UDT6 1046 aa12.96□□□□□ -0.33
PPP4R1-208ENST00000578178 PPP1R9AQ9ULJ8 1098 aa12.96□□□□□ -0.33
PPP4R1-208ENST00000578178 SLC15A5A6NIM6 579 aa12.95□□□□□ -0.34
PPP4R1-208ENST00000578178 FGRP09769 529 aa12.95□□□□□ -0.34
PPP4R1-208ENST00000578178 PTPREP23469 700 aa12.95□□□□□ -0.34
PPP4R1-208ENST00000578178 PLS1Q14651 629 aa12.95□□□□□ -0.34
PPP4R1-208ENST00000578178 U2AF1L4Q8WU68 220 aaKnown RBP12.95□□□□□ -0.34
PPP4R1-208ENST00000578178 SLF1Q9BQI6 1058 aa12.95□□□□□ -0.34
PPP4R1-208ENST00000578178 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.95□□□□□ -0.341e-10■■■■■ 30
PPP4R1-208ENST00000578178 PAK6Q9NQU5 681 aaPredicted RBP12.95□□□□□ -0.34
PPP4R1-208ENST00000578178 ADAMTS5Q9UNA0 930 aa12.95□□□□□ -0.34
PPP4R1-208ENST00000578178 TACC3Q9Y6A5 838 aa12.95□□□□□ -0.34
PPP4R1-208ENST00000578178 RAD50Q92878 1312 aa12.94□□□□□ -0.34
PPP4R1-208ENST00000578178 MKI67P46013 3256 aaKnown RBP12.94□□□□□ -0.34
PPP4R1-208ENST00000578178 VWA5AO00534 786 aa12.94□□□□□ -0.34
PPP4R1-208ENST00000578178 RANBP6O60518 1105 aaKnown RBP12.94□□□□□ -0.34
PPP4R1-208ENST00000578178 PCP11498 1178 aaKnown RBP12.94□□□□□ -0.34
PPP4R1-208ENST00000578178 ERCC3P19447 782 aa12.94□□□□□ -0.34
PPP4R1-208ENST00000578178 HAND2P61296 217 aa12.94□□□□□ -0.34
PPP4R1-208ENST00000578178 TMEM132BQ14DG7 1078 aa12.94□□□□□ -0.34
PPP4R1-208ENST00000578178 MROH8Q9H579 483 aa12.94□□□□□ -0.34
PPP4R1-208ENST00000578178 INCENPQ9NQS7 918 aa12.94□□□□□ -0.34
PPP4R1-208ENST00000578178 TOMM22Q9NS69 142 aa12.94□□□□□ -0.34
PPP4R1-208ENST00000578178 STX8Q9UNK0 236 aa12.94□□□□□ -0.34
PPP4R1-208ENST00000578178 RPTORQ8N122 1335 aa12.93□□□□□ -0.34
PPP4R1-208ENST00000578178 FRMPD3Q5JV73 1810 aa12.93□□□□□ -0.34
PPP4R1-208ENST00000578178 SLC25A27O95847 323 aa12.93□□□□□ -0.34
PPP4R1-208ENST00000578178 HOXC6P09630 235 aa12.93□□□□□ -0.34
PPP4R1-208ENST00000578178 PRKAR2AP13861 404 aaKnown RBP12.93□□□□□ -0.34
PPP4R1-208ENST00000578178 TRIM32Q13049 653 aa12.93□□□□□ -0.34
PPP4R1-208ENST00000578178 CCL14Q16627 93 aa12.93□□□□□ -0.34
PPP4R1-208ENST00000578178 RRP12Q5JTH9 1297 aaKnown RBP12.93□□□□□ -0.34
PPP4R1-208ENST00000578178 MAP3K21Q5TCX8 1036 aa12.93□□□□□ -0.34
PPP4R1-208ENST00000578178 SLFN13Q68D06 897 aa12.93□□□□□ -0.34
PPP4R1-208ENST00000578178 NCAPG2Q86XI2 1143 aa12.93□□□□□ -0.34
PPP4R1-208ENST00000578178 TBC1D10CQ8IV04 446 aa12.93□□□□□ -0.34
PPP4R1-208ENST00000578178 REPS2Q8NFH8 660 aa12.93□□□□□ -0.34
PPP4R1-208ENST00000578178 STAG1Q8WVM7 1258 aa12.93□□□□□ -0.34
PPP4R1-208ENST00000578178 DEFB118Q96PH6 123 aa12.93□□□□□ -0.34
PPP4R1-208ENST00000578178 DSCC1Q9BVC3 393 aa12.93□□□□□ -0.34
PPP4R1-208ENST00000578178 NBPF3Q9H094 633 aa12.93□□□□□ -0.34
PPP4R1-208ENST00000578178 RNF41Q9H4P4 317 aaPredicted RBP12.93□□□□□ -0.34
PPP4R1-208ENST00000578178 HMX1Q9NP08 348 aaPredicted RBP12.93□□□□□ -0.34
PPP4R1-208ENST00000578178 IL17RBQ9NRM6 502 aa12.93□□□□□ -0.34
PPP4R1-208ENST00000578178 ZNF214Q9UL59 606 aaPredicted RBP12.93□□□□□ -0.34
PPP4R1-208ENST00000578178 STRNO43815 780 aa12.92□□□□□ -0.34
PPP4R1-208ENST00000578178 NMT2O60551 498 aa12.92□□□□□ -0.34
PPP4R1-208ENST00000578178 SGPL1O95470 568 aa12.92□□□□□ -0.34
PPP4R1-208ENST00000578178 BMP3P12645 472 aa12.92□□□□□ -0.34
PPP4R1-208ENST00000578178 CAPN2P17655 700 aa12.92□□□□□ -0.34
PPP4R1-208ENST00000578178 ADORA2AP29274 412 aa12.92□□□□□ -0.34
PPP4R1-208ENST00000578178 COPB2P35606 906 aa12.92□□□□□ -0.34
PPP4R1-208ENST00000578178 NOVP48745 357 aa12.92□□□□□ -0.34
PPP4R1-208ENST00000578178 AKNAD1Q5T1N1 836 aa12.92□□□□□ -0.34
PPP4R1-208ENST00000578178 RIOX2Q8IUF8 465 aa12.92□□□□□ -0.34
PPP4R1-208ENST00000578178 ABRAQ8N0Z2 381 aa12.92□□□□□ -0.34
PPP4R1-208ENST00000578178 PRPF38AQ8NAV1 312 aaKnown RBP12.92□□□□□ -0.34
PPP4R1-208ENST00000578178 GMCL1Q96IK5 515 aa12.92□□□□□ -0.34
PPP4R1-208ENST00000578178 FEM1BQ9UK73 627 aa12.92□□□□□ -0.34
PPP4R1-208ENST00000578178 NEDD4P46934 1319 aa12.91□□□□□ -0.34
PPP4R1-208ENST00000578178 PLXNA1Q9UIW2 1896 aa12.91□□□□□ -0.34
PPP4R1-208ENST00000578178 ZNF213O14771 459 aa12.91□□□□□ -0.34
PPP4R1-208ENST00000578178 FARP2O94887 1054 aaPredicted RBP12.91□□□□□ -0.34
PPP4R1-208ENST00000578178 STAT3P40763 770 aa12.91□□□□□ -0.34
PPP4R1-208ENST00000578178 SLC1A4P43007 532 aa12.91□□□□□ -0.34
PPP4R1-208ENST00000578178 NT5C2P49902 561 aa12.91□□□□□ -0.34
PPP4R1-208ENST00000578178 PRPF38BQ5VTL8 546 aaKnown RBP12.91□□□□□ -0.34
PPP4R1-208ENST00000578178 MFSD14CQ5VZR4 134 aa12.91□□□□□ -0.34
PPP4R1-208ENST00000578178 MFSD6Q6ZSS7 791 aa12.91□□□□□ -0.34
PPP4R1-208ENST00000578178 UBE2Q1Q7Z7E8 422 aa12.91□□□□□ -0.34
PPP4R1-208ENST00000578178 NPLOC4Q8TAT6 608 aa12.91□□□□□ -0.34
PPP4R1-208ENST00000578178 KIFC2Q96AC6 838 aa12.91□□□□□ -0.34
PPP4R1-208ENST00000578178 TEX13BQ9BXU2 312 aa12.91□□□□□ -0.34
PPP4R1-208ENST00000578178 CRISPLD2Q9H0B8 497 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms