RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 SGSM3Q96HU1 749 aa6.18□□□□□ -1.42
VAPA-203ENST00000577539 MPHOSPH8Q99549 860 aa6.18□□□□□ -1.42
VAPA-203ENST00000577539 ZBTB1Q9Y2K1 713 aa6.18□□□□□ -1.42
VAPA-203ENST00000577539 ZNF532Q9HCE3 1301 aa6.18□□□□□ -1.42
VAPA-203ENST00000577539 PPEF1O14829 653 aaPredicted RBP6.17□□□□□ -1.42
VAPA-203ENST00000577539 CAVIN2O95810 425 aa6.17□□□□□ -1.42
VAPA-203ENST00000577539 SLC3A2P08195 630 aaKnown RBP6.17□□□□□ -1.42
VAPA-203ENST00000577539 NDUFA8P51970 172 aa6.17□□□□□ -1.42
VAPA-203ENST00000577539 CCDC144BQ3MJ40 725 aa6.17□□□□□ -1.42
VAPA-203ENST00000577539 NLRP10Q86W26 655 aa6.17□□□□□ -1.42
VAPA-203ENST00000577539 FBXO18Q8NFZ0 1043 aa6.17□□□□□ -1.42
VAPA-203ENST00000577539 TTLL11Q8NHH1 800 aa6.17□□□□□ -1.42
VAPA-203ENST00000577539 NAPBQ9H115 298 aa6.17□□□□□ -1.42
VAPA-203ENST00000577539 INCENPQ9NQS7 918 aa6.17□□□□□ -1.42
VAPA-203ENST00000577539 SPTLC3Q9NUV7 552 aa6.17□□□□□ -1.42
VAPA-203ENST00000577539 MAP3K15Q6ZN16 1313 aa6.17□□□□□ -1.42
VAPA-203ENST00000577539 A0A0U1RQG5 324 aaPredicted RBP6.17□□□□□ -1.42
VAPA-203ENST00000577539 ENOX2Q16206 610 aaKnown RBP6.17□□□□□ -1.42
VAPA-203ENST00000577539 TMEM67Q5HYA8 995 aa6.17□□□□□ -1.42
VAPA-203ENST00000577539 DPH6Q7L8W6 267 aa6.17□□□□□ -1.42
VAPA-203ENST00000577539 MTERF4Q7Z6M4 381 aaKnown RBP6.17□□□□□ -1.42
VAPA-203ENST00000577539 KCNG4Q8TDN1 519 aa6.17□□□□□ -1.42
VAPA-203ENST00000577539 KLF16Q9BXK1 252 aaPredicted RBP6.17□□□□□ -1.42
VAPA-203ENST00000577539 PIH1D3Q9NQM4 214 aaKnown RBP6.17□□□□□ -1.42
VAPA-203ENST00000577539 C5P01031 1676 aa6.17□□□□□ -1.42
VAPA-203ENST00000577539 GOLGA8AA7E2F4 631 aa6.17□□□□□ -1.42
VAPA-203ENST00000577539 IFIT3O14879 490 aaKnown RBP6.17□□□□□ -1.42
VAPA-203ENST00000577539 SKILP12757 684 aa6.17□□□□□ -1.42
VAPA-203ENST00000577539 GRNP28799 593 aaKnown RBP6.17□□□□□ -1.42
VAPA-203ENST00000577539 CTSWP56202 376 aa6.17□□□□□ -1.42
VAPA-203ENST00000577539 TPM4P67936 248 aa6.17□□□□□ -1.42
VAPA-203ENST00000577539 NBPF20Q3BBV1 942 aa6.17□□□□□ -1.42
VAPA-203ENST00000577539 MB21D2Q8IYB1 491 aaPredicted RBP6.17□□□□□ -1.42
VAPA-203ENST00000577539 ZNF784Q8NCA9 323 aaPredicted RBP6.17□□□□□ -1.42
VAPA-203ENST00000577539 LINC00301Q8NCQ3 95 aa6.17□□□□□ -1.42
VAPA-203ENST00000577539 FHDC1Q9C0D6 1143 aaPredicted RBP6.17□□□□□ -1.42
VAPA-203ENST00000577539 PRDM10Q9NQV6 1147 aa6.17□□□□□ -1.42
VAPA-203ENST00000577539 ANGEL1Q9UNK9 670 aaKnown RBP6.17□□□□□ -1.42
VAPA-203ENST00000577539 CPDO75976 1380 aa6.17□□□□□ -1.42
VAPA-203ENST00000577539 CCDC69A6NI79 296 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 ZBTB43O43298 467 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 PDE6AP16499 860 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 IARSP41252 1262 aaKnown RBP6.16□□□□□ -1.42
VAPA-203ENST00000577539 TDO2P48775 406 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 ANTXR2P58335 489 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 TTF1Q15361 905 aaPredicted RBP6.16□□□□□ -1.42
VAPA-203ENST00000577539 ANO1Q5XXA6 986 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 ATL3Q6DD88 541 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 ADALQ6DHV7 355 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 RBM43Q6ZSC3 357 aaKnown RBP6.16□□□□□ -1.42
VAPA-203ENST00000577539 PLA2G4DQ86XP0 818 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 EXOC8Q8IYI6 725 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 MAGEB6Q8N7X4 407 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 NUP133Q8WUM0 1156 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 ZKSCAN3Q9BRR0 538 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 SLC26A6Q9BXS9 759 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 AGXT2Q9BYV1 514 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 RTEL1Q9NZ71 1219 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 EXOC5O00471 708 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 CDKL5O76039 1030 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 MBD4O95243 580 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 ADD2P35612 726 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 SNW1Q13573 536 aaKnown RBP6.16□□□□□ -1.42
VAPA-203ENST00000577539 IQCB1Q15051 598 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 DPCR1Q3MIW9 517 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 EAPPQ56P03 285 aaPredicted RBP6.16□□□□□ -1.42
VAPA-203ENST00000577539 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.16□□□□□ -1.42
VAPA-203ENST00000577539 TBC1D10CQ8IV04 446 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 CCDC112Q8NEF3 446 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 ZNF526Q8TF50 670 aaPredicted RBP6.16□□□□□ -1.42
VAPA-203ENST00000577539 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.16□□□□□ -1.42
VAPA-203ENST00000577539 ARMT1Q9H993 441 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 SRA1Q9HD15 236 aaKnown RBP6.16□□□□□ -1.42
VAPA-203ENST00000577539 ABCF2Q9UG63 623 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 ZNF335Q9H4Z2 1342 aaPredicted RBP6.16□□□□□ -1.42
VAPA-203ENST00000577539 PHRF1Q9P1Y6 1649 aaKnown RBP6.16□□□□□ -1.42
VAPA-203ENST00000577539 CRYBG1Q9Y4K1 1723 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 KIF28PB7ZC32 967 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 ZNF202O95125 648 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 PDE8BO95263 885 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 CBX1P83916 185 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 MAP3K12Q12852 859 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 TRIM28Q13263 835 aaKnown RBP6.16□□□□□ -1.42
VAPA-203ENST00000577539 TBCELQ5QJ74 424 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 KRT40Q6A162 431 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 CYB5R4Q7L1T6 521 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 TMC6Q7Z403 805 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 MIGA1Q8NAN2 632 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 SCG3Q8WXD2 468 aaKnown RBP6.16□□□□□ -1.42
VAPA-203ENST00000577539 ACSBG1Q96GR2 724 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 SLC6A16Q9GZN6 736 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 SENP2Q9HC62 589 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 LRP2BPQ9P2M1 347 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 SLC12A7Q9Y666 1083 aa6.16□□□□□ -1.42
VAPA-203ENST00000577539 MINDY4BA8MYZ0 360 aa6.15□□□□□ -1.42
VAPA-203ENST00000577539 SCAMP3O14828 347 aaKnown RBP6.15□□□□□ -1.42
VAPA-203ENST00000577539 NPHP1O15259 732 aa6.15□□□□□ -1.42
VAPA-203ENST00000577539 FOXP2O15409 715 aa6.15□□□□□ -1.42
VAPA-203ENST00000577539 NRDCO43847 1150 aa6.15□□□□□ -1.42
VAPA-203ENST00000577539 PDE8AO60658 829 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms