RNA–Protein interactions for RNA: ENST00000574728.1

PRPF8-211, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-211ENST00000574728 CCDC84Q86UT8 332 aaPredicted RBP6.55□□□□□ -1.36
PRPF8-211ENST00000574728 TRIM42Q8IWZ5 723 aa6.55□□□□□ -1.36
PRPF8-211ENST00000574728 ZNF654Q8IZM8 581 aa6.55□□□□□ -1.36
PRPF8-211ENST00000574728 TCP11L2Q8N4U5 519 aa6.55□□□□□ -1.36
PRPF8-211ENST00000574728 GPBAR1Q8TDU6 330 aa6.55□□□□□ -1.36
PRPF8-211ENST00000574728 IP6K1Q92551 441 aa6.55□□□□□ -1.36
PRPF8-211ENST00000574728 TGIF2Q9GZN2 237 aa6.55□□□□□ -1.36
PRPF8-211ENST00000574728 PCDHB5Q9Y5E4 795 aa6.55□□□□□ -1.36
PRPF8-211ENST00000574728 PCDHGB7Q9Y5F8 929 aa6.55□□□□□ -1.36
PRPF8-211ENST00000574728 WASHC2AQ641Q2 1341 aa6.54□□□□□ -1.36
PRPF8-211ENST00000574728 SYNGAP1Q96PV0 1343 aa6.54□□□□□ -1.36
PRPF8-211ENST00000574728 PEAK1Q9H792 1746 aa6.54□□□□□ -1.36
PRPF8-211ENST00000574728 KRBA1A5PL33 1030 aa6.54□□□□□ -1.36
PRPF8-211ENST00000574728 ZNF862O60290 1169 aa6.54□□□□□ -1.36
PRPF8-211ENST00000574728 AOC2O75106 756 aa6.54□□□□□ -1.36
PRPF8-211ENST00000574728 RASSF7Q02833 373 aa6.54□□□□□ -1.36
PRPF8-211ENST00000574728 FAM160A1Q05DH4 1040 aa6.54□□□□□ -1.36
PRPF8-211ENST00000574728 SEPT6Q14141 434 aa6.54□□□□□ -1.36
PRPF8-211ENST00000574728 ADGRE1Q14246 886 aa6.54□□□□□ -1.36
PRPF8-211ENST00000574728 MBTPS1Q14703 1052 aa6.54□□□□□ -1.36
PRPF8-211ENST00000574728 KIF4BQ2VIQ3 1234 aa6.54□□□□□ -1.36
PRPF8-211ENST00000574728 SNAP47Q5SQN1 464 aa6.54□□□□□ -1.36
PRPF8-211ENST00000574728 ANKRD34AQ69YU3 496 aa6.54□□□□□ -1.36
PRPF8-211ENST00000574728 FDX2Q6P4F2 183 aa6.54□□□□□ -1.36
PRPF8-211ENST00000574728 MPRIPQ6WCQ1 1025 aa6.54□□□□□ -1.36
PRPF8-211ENST00000574728 KRT27Q7Z3Y8 459 aa6.54□□□□□ -1.36
PRPF8-211ENST00000574728 AGGF1Q8N302 714 aaeCLIP6.54□□□□□ -1.36
PRPF8-211ENST00000574728 SMG8Q8ND04 991 aaKnown RBP6.54□□□□□ -1.36
PRPF8-211ENST00000574728 WDR18Q9BV38 432 aa6.54□□□□□ -1.36
PRPF8-211ENST00000574728 CEP41Q9BYV8 373 aa6.54□□□□□ -1.36
PRPF8-211ENST00000574728 CCSER2Q9H7U1 834 aa6.54□□□□□ -1.36
PRPF8-211ENST00000574728 PANK3Q9H999 370 aa6.54□□□□□ -1.36
PRPF8-211ENST00000574728 SUGCTQ9HAC7 445 aa6.54□□□□□ -1.36
PRPF8-211ENST00000574728 CACNA2D2Q9NY47 1150 aa6.54□□□□□ -1.36
PRPF8-211ENST00000574728 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.54□□□□□ -1.36
PRPF8-211ENST00000574728 SUPT16HQ9Y5B9 1047 aaKnown RBP6.54□□□□□ -1.36
PRPF8-211ENST00000574728 BLMP54132 1417 aaPredicted RBP6.53□□□□□ -1.36
PRPF8-211ENST00000574728 NCAPD2Q15021 1401 aa6.53□□□□□ -1.36
PRPF8-211ENST00000574728 ALX3O95076 343 aa6.53□□□□□ -1.36
PRPF8-211ENST00000574728 HOXC9P31274 260 aa6.53□□□□□ -1.36
PRPF8-211ENST00000574728 RACK1P63244 317 aaKnown RBP6.53□□□□□ -1.36
PRPF8-211ENST00000574728 RAD51AP2Q09MP3 1159 aa6.53□□□□□ -1.36
PRPF8-211ENST00000574728 RRS1Q15050 365 aaKnown RBP6.53□□□□□ -1.36
PRPF8-211ENST00000574728 AKAP4Q5JQC9 854 aa6.53□□□□□ -1.36
PRPF8-211ENST00000574728 KIAA0825Q8IV33 1275 aa6.53□□□□□ -1.36
PRPF8-211ENST00000574728 GOLM1Q8NBJ4 401 aa6.53□□□□□ -1.36
PRPF8-211ENST00000574728 WFDC12Q8WWY7 111 aa6.53□□□□□ -1.36
PRPF8-211ENST00000574728 JARID2Q92833 1246 aaPredicted RBP6.53□□□□□ -1.36
PRPF8-211ENST00000574728 GAL3ST3Q96A11 431 aa6.53□□□□□ -1.36
PRPF8-211ENST00000574728 WDR89Q96FK6 387 aaPredicted RBP6.53□□□□□ -1.36
PRPF8-211ENST00000574728 COG3Q96JB2 828 aa6.53□□□□□ -1.36
PRPF8-211ENST00000574728 SPON2Q9BUD6 331 aa6.53□□□□□ -1.36
PRPF8-211ENST00000574728 ADAMTS1Q9UHI8 967 aa6.53□□□□□ -1.36
PRPF8-211ENST00000574728 PCDHA4Q9UN74 947 aa6.53□□□□□ -1.36
PRPF8-211ENST00000574728 THRAP3Q9Y2W1 955 aaKnown RBP6.53□□□□□ -1.36
PRPF8-211ENST00000574728 CCDC7Q96M83 1385 aa6.53□□□□□ -1.36
PRPF8-211ENST00000574728 BCL9O00512 1426 aa6.52□□□□□ -1.37
PRPF8-211ENST00000574728 LRRC37A3O60309 1634 aa6.52□□□□□ -1.37
PRPF8-211ENST00000574728 SART1O43290 800 aaKnown RBP6.52□□□□□ -1.37
PRPF8-211ENST00000574728 BPNT1O95861 308 aa6.52□□□□□ -1.37
PRPF8-211ENST00000574728 GLB1P16278 677 aa6.52□□□□□ -1.37
PRPF8-211ENST00000574728 NOS3P29474 1203 aa6.52□□□□□ -1.37
PRPF8-211ENST00000574728 IREB2P48200 963 aaKnown RBP6.52□□□□□ -1.37
PRPF8-211ENST00000574728 EVA1CP58658 441 aa6.52□□□□□ -1.37
PRPF8-211ENST00000574728 PTF1AQ7RTS3 328 aa6.52□□□□□ -1.37
PRPF8-211ENST00000574728 TXNRD3Q86VQ6 643 aa6.52□□□□□ -1.37
PRPF8-211ENST00000574728 C12orf50Q8NA57 414 aaPredicted RBP6.52□□□□□ -1.37
PRPF8-211ENST00000574728 MARCH10Q8NA82 808 aaPredicted RBP6.52□□□□□ -1.37
PRPF8-211ENST00000574728 ZNF296Q8WUU4 475 aaPredicted RBP6.52□□□□□ -1.37
PRPF8-211ENST00000574728 KCNQ5Q9NR82 932 aa6.52□□□□□ -1.37
PRPF8-211ENST00000574728 USP35Q9P2H5 1018 aa6.52□□□□□ -1.37
PRPF8-211ENST00000574728 POLKQ9UBT6 870 aa6.52□□□□□ -1.37
PRPF8-211ENST00000574728 PARP4Q9UKK3 1724 aaKnown RBP6.52□□□□□ -1.37
PRPF8-211ENST00000574728 RTL1A6NKG5 1358 aa6.52□□□□□ -1.37
PRPF8-211ENST00000574728 FAM208AQ9UK61 1670 aaKnown RBP6.52□□□□□ -1.37
PRPF8-211ENST00000574728 RGPD5Q99666 1765 aa6.52□□□□□ -1.37
PRPF8-211ENST00000574728 SMG6Q86US8 1419 aaKnown RBP6.51□□□□□ -1.37
PRPF8-211ENST00000574728 ANKRD26Q9UPS8 1709 aa6.51□□□□□ -1.37
PRPF8-211ENST00000574728 C1QTNF9BB2RNN3 333 aa6.51□□□□□ -1.37
PRPF8-211ENST00000574728 GDF11O95390 407 aa6.51□□□□□ -1.37
PRPF8-211ENST00000574728 F13A1P00488 732 aa6.51□□□□□ -1.37
PRPF8-211ENST00000574728 ADH5P11766 374 aa6.51□□□□□ -1.37
PRPF8-211ENST00000574728 GARTP22102 1010 aa6.51□□□□□ -1.37
PRPF8-211ENST00000574728 CHRNA4P43681 627 aa6.51□□□□□ -1.37
PRPF8-211ENST00000574728 ID3Q02535 119 aa6.51□□□□□ -1.37
PRPF8-211ENST00000574728 PTPN11Q06124 597 aaPredicted RBP6.51□□□□□ -1.37
PRPF8-211ENST00000574728 SOX4Q06945 474 aaPredicted RBP6.51□□□□□ -1.37
PRPF8-211ENST00000574728 HSP90AB2PQ58FF8 381 aa6.51□□□□□ -1.37
PRPF8-211ENST00000574728 NBPF6Q5VWK0 638 aa6.51□□□□□ -1.37
PRPF8-211ENST00000574728 FBXL19Q6PCT2 694 aa6.51□□□□□ -1.37
PRPF8-211ENST00000574728 BNC2Q6ZN30 1099 aaPredicted RBP6.51□□□□□ -1.37
PRPF8-211ENST00000574728 Q6ZS46 218 aa6.51□□□□□ -1.37
PRPF8-211ENST00000574728 CD163Q86VB7 1156 aa6.51□□□□□ -1.37
PRPF8-211ENST00000574728 TMEM151AQ8N4L1 468 aa6.51□□□□□ -1.37
PRPF8-211ENST00000574728 GATAD2BQ8WXI9 593 aa6.51□□□□□ -1.37
PRPF8-211ENST00000574728 ELMO3Q96BJ8 720 aa6.51□□□□□ -1.37
PRPF8-211ENST00000574728 NBPF4Q96M43 638 aa6.51□□□□□ -1.37
PRPF8-211ENST00000574728 AP4E1Q9UPM8 1137 aa6.51□□□□□ -1.37
PRPF8-211ENST00000574728 INSRP06213 1382 aa6.51□□□□□ -1.37
PRPF8-211ENST00000574728 KIF24Q5T7B8 1368 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms