RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 SELPP16109 830 aa7.68□□□□□ -1.18
SF3B3-214ENST00000572365 HNRNPUQ00839 825 aaKnown RBP eCLIP7.68□□□□□ -1.18
SF3B3-214ENST00000572365 HP1BP3Q5SSJ5 553 aaPredicted RBP7.68□□□□□ -1.18
SF3B3-214ENST00000572365 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.68□□□□□ -1.18
SF3B3-214ENST00000572365 FMR1NBQ8N0W7 255 aaPredicted RBP7.68□□□□□ -1.18
SF3B3-214ENST00000572365 REXO1Q8N1G1 1221 aaKnown RBP7.68□□□□□ -1.18
SF3B3-214ENST00000572365 USP26Q9BXU7 913 aa7.68□□□□□ -1.18
SF3B3-214ENST00000572365 OVOS2A0A0G2JMS6 1433 aa7.68□□□□□ -1.18
SF3B3-214ENST00000572365 OVOS2A0A0J9YW53 1432 aa7.68□□□□□ -1.18
SF3B3-214ENST00000572365 OVOS2Q6IE36 1432 aa7.68□□□□□ -1.18
SF3B3-214ENST00000572365 RGPD5Q99666 1765 aa7.67□□□□□ -1.18
SF3B3-214ENST00000572365 GNB5O14775 395 aa7.67□□□□□ -1.18
SF3B3-214ENST00000572365 WIPF1O43516 503 aa7.67□□□□□ -1.18
SF3B3-214ENST00000572365 DLGAP3O95886 979 aa7.67□□□□□ -1.18
SF3B3-214ENST00000572365 POLD1P28340 1107 aa7.67□□□□□ -1.18
SF3B3-214ENST00000572365 RAC1P63000 192 aa7.67□□□□□ -1.18
SF3B3-214ENST00000572365 SNRPNP63162 240 aaKnown RBP7.67□□□□□ -1.18
SF3B3-214ENST00000572365 KIF4BQ2VIQ3 1234 aa7.67□□□□□ -1.18
SF3B3-214ENST00000572365 TOM1L2Q6ZVM7 507 aa7.67□□□□□ -1.18
SF3B3-214ENST00000572365 SYNGAP1Q96PV0 1343 aa7.67□□□□□ -1.18
SF3B3-214ENST00000572365 PRAG1Q86YV5 1406 aa7.67□□□□□ -1.18
SF3B3-214ENST00000572365 PHRF1Q9P1Y6 1649 aaKnown RBP7.67□□□□□ -1.18
SF3B3-214ENST00000572365 PARP4Q9UKK3 1724 aaKnown RBP7.66□□□□□ -1.18
SF3B3-214ENST00000572365 GFRA2O00451 464 aa7.66□□□□□ -1.18
SF3B3-214ENST00000572365 PIK3R2O00459 728 aa7.66□□□□□ -1.18
SF3B3-214ENST00000572365 GRIN3BO60391 1043 aa7.66□□□□□ -1.18
SF3B3-214ENST00000572365 ZNF165P49910 485 aa7.66□□□□□ -1.18
SF3B3-214ENST00000572365 PDE3AQ14432 1141 aa7.66□□□□□ -1.18
SF3B3-214ENST00000572365 WDR89Q96FK6 387 aaPredicted RBP7.66□□□□□ -1.18
SF3B3-214ENST00000572365 DNAJC2Q99543 621 aaKnown RBP7.66□□□□□ -1.18
SF3B3-214ENST00000572365 PLVAPQ9BX97 442 aa7.66□□□□□ -1.18
SF3B3-214ENST00000572365 PCDHA4Q9UN74 947 aa7.66□□□□□ -1.18
SF3B3-214ENST00000572365 AKAP12Q02952 1782 aa7.66□□□□□ -1.18
SF3B3-214ENST00000572365 SPDYE3A6NKU9 549 aa7.65□□□□□ -1.18
SF3B3-214ENST00000572365 STK10O94804 968 aaKnown RBP7.65□□□□□ -1.18
SF3B3-214ENST00000572365 SSBP05455 408 aaKnown RBP eCLIP7.65□□□□□ -1.18
SF3B3-214ENST00000572365 CDK8P49336 464 aa7.65□□□□□ -1.18
SF3B3-214ENST00000572365 SMIM5Q71RC9 77 aa7.65□□□□□ -1.18
SF3B3-214ENST00000572365 KNDC1Q76NI1 1749 aa7.65□□□□□ -1.18
SF3B3-214ENST00000572365 SRRTQ9BXP5 876 aaKnown RBP7.65□□□□□ -1.18
SF3B3-214ENST00000572365 EHMT1Q9H9B1 1298 aa7.65□□□□□ -1.18
SF3B3-214ENST00000572365 BRMS1Q9HCU9 246 aa7.65□□□□□ -1.18
SF3B3-214ENST00000572365 MKL2Q9ULH7 1088 aa7.65□□□□□ -1.18
SF3B3-214ENST00000572365 PPT2Q9UMR5 302 aa7.65□□□□□ -1.18
SF3B3-214ENST00000572365 POLR3KQ9Y2Y1 108 aaPredicted RBP7.65□□□□□ -1.18
SF3B3-214ENST00000572365 PCDHGC5Q9Y5F6 944 aa7.65□□□□□ -1.18
SF3B3-214ENST00000572365 TACC3Q9Y6A5 838 aa7.65□□□□□ -1.18
SF3B3-214ENST00000572365 SNCAIPQ9Y6H5 919 aa7.65□□□□□ -1.18
SF3B3-214ENST00000572365 TUBGCP6Q96RT7 1819 aa7.64□□□□□ -1.19
SF3B3-214ENST00000572365 RGPD3A6NKT7 1758 aaPredicted RBP7.64□□□□□ -1.19
SF3B3-214ENST00000572365 RGPD4Q7Z3J3 1758 aa7.64□□□□□ -1.19
SF3B3-214ENST00000572365 ATE1O95260 518 aa7.64□□□□□ -1.19
SF3B3-214ENST00000572365 LIG1P18858 919 aa7.64□□□□□ -1.19
SF3B3-214ENST00000572365 LORP23490 312 aaPredicted RBP7.64□□□□□ -1.19
SF3B3-214ENST00000572365 MCM4P33991 863 aa7.64□□□□□ -1.19
SF3B3-214ENST00000572365 INPP5AQ14642 412 aa7.64□□□□□ -1.19
SF3B3-214ENST00000572365 DUOXA2Q1HG44 320 aa7.64□□□□□ -1.19
SF3B3-214ENST00000572365 WIPI1Q5MNZ9 446 aaPredicted RBP7.64□□□□□ -1.19
SF3B3-214ENST00000572365 EXOSC6Q5RKV6 272 aaKnown RBP7.64□□□□□ -1.19
SF3B3-214ENST00000572365 SOGA3Q5TF21 947 aa7.64□□□□□ -1.19
SF3B3-214ENST00000572365 LRFN4Q6PJG9 635 aa7.64□□□□□ -1.19
SF3B3-214ENST00000572365 HDXQ7Z353 690 aa7.64□□□□□ -1.19
SF3B3-214ENST00000572365 UBASH3BQ8TF42 649 aa7.64□□□□□ -1.19
SF3B3-214ENST00000572365 PLPPR2Q96GM1 343 aa7.64□□□□□ -1.19
SF3B3-214ENST00000572365 SHDQ96IW2 340 aa7.64□□□□□ -1.19
SF3B3-214ENST00000572365 WDR18Q9BV38 432 aa7.64□□□□□ -1.19
SF3B3-214ENST00000572365 TMPRSS13Q9BYE2 586 aa7.64□□□□□ -1.19
SF3B3-214ENST00000572365 ZNF408Q9H9D4 720 aa7.64□□□□□ -1.19
SF3B3-214ENST00000572365 TFCP2L1Q9NZI6 479 aa7.64□□□□□ -1.19
SF3B3-214ENST00000572365 ZNRF3Q9ULT6 936 aa7.64□□□□□ -1.19
SF3B3-214ENST00000572365 THRAP3Q9Y2W1 955 aaKnown RBP7.64□□□□□ -1.19
SF3B3-214ENST00000572365 LRRC37A3O60309 1634 aa7.63□□□□□ -1.19
SF3B3-214ENST00000572365 ATP7BP35670 1465 aa7.63□□□□□ -1.19
SF3B3-214ENST00000572365 DHX57Q6P158 1386 aaKnown RBP7.63□□□□□ -1.19
SF3B3-214ENST00000572365 MAP3K5Q99683 1374 aa7.63□□□□□ -1.19
SF3B3-214ENST00000572365 PNPLA7Q6ZV29 1317 aa7.63□□□□□ -1.19
SF3B3-214ENST00000572365 MEGF11A6BM72 1044 aa7.63□□□□□ -1.19
SF3B3-214ENST00000572365 EXOC5O00471 708 aa7.63□□□□□ -1.19
SF3B3-214ENST00000572365 AOC2O75106 756 aa7.63□□□□□ -1.19
SF3B3-214ENST00000572365 GCP02774 474 aa7.63□□□□□ -1.19
SF3B3-214ENST00000572365 ELNP15502 786 aa7.63□□□□□ -1.19
SF3B3-214ENST00000572365 CLCQ05315 142 aa7.63□□□□□ -1.19
SF3B3-214ENST00000572365 ZC3H12AQ5D1E8 599 aaKnown RBP7.63□□□□□ -1.19
SF3B3-214ENST00000572365 CYFIP1Q7L576 1253 aa7.63□□□□□ -1.19
SF3B3-214ENST00000572365 C14orf93Q9H972 538 aaKnown RBP7.63□□□□□ -1.19
SF3B3-214ENST00000572365 NMRK2Q9NPI5 230 aa7.63□□□□□ -1.19
SF3B3-214ENST00000572365 TOPAZ1Q8N9V7 1692 aa7.63□□□□□ -1.19
SF3B3-214ENST00000572365 ROCK1Q13464 1354 aa7.62□□□□□ -1.19
SF3B3-214ENST00000572365 ACEP12821 1306 aa7.62□□□□□ -1.19
SF3B3-214ENST00000572365 WISP1O95388 367 aa7.62□□□□□ -1.19
SF3B3-214ENST00000572365 SLFN14P0C7P3 912 aa7.62□□□□□ -1.19
SF3B3-214ENST00000572365 IMPDH2P12268 514 aa7.62□□□□□ -1.19
SF3B3-214ENST00000572365 ETFBP38117 255 aa7.62□□□□□ -1.19
SF3B3-214ENST00000572365 GIPRP48546 466 aa7.62□□□□□ -1.19
SF3B3-214ENST00000572365 RING1Q06587 406 aa7.62□□□□□ -1.19
SF3B3-214ENST00000572365 TRIM28Q13263 835 aaKnown RBP7.62□□□□□ -1.19
SF3B3-214ENST00000572365 NBPF6Q5VWK0 638 aa7.62□□□□□ -1.19
SF3B3-214ENST00000572365 IGF2-ASQ6U949 168 aa7.62□□□□□ -1.19
SF3B3-214ENST00000572365 GK5Q6ZS86 529 aa7.62□□□□□ -1.19
SF3B3-214ENST00000572365 KIAA1211Q6ZU35 1233 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms