RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 ROBO3Q96MS0 1386 aa22.23■■□□□ 1.15
LINC01238-205ENST00000567549 CYP2D7A0A087X1C5 515 aa22.22■■□□□ 1.15
LINC01238-205ENST00000567549 SEPT4O43236 478 aa22.22■■□□□ 1.15
LINC01238-205ENST00000567549 CYBAP13498 195 aa22.22■■□□□ 1.15
LINC01238-205ENST00000567549 CYP2C19P33261 490 aa22.22■■□□□ 1.15
LINC01238-205ENST00000567549 EVX2Q03828 476 aa22.22■■□□□ 1.15
LINC01238-205ENST00000567549 RIOX2Q8IUF8 465 aa22.22■■□□□ 1.15
LINC01238-205ENST00000567549 NYAP2Q9P242 653 aa22.22■■□□□ 1.15
LINC01238-205ENST00000567549 MINDY4BA8MYZ0 360 aa22.21■■□□□ 1.15
LINC01238-205ENST00000567549 GPAA1O43292 621 aa22.21■■□□□ 1.15
LINC01238-205ENST00000567549 SLFNL1Q499Z3 407 aa22.21■■□□□ 1.15
LINC01238-205ENST00000567549 SIAH1Q8IUQ4 282 aa22.21■■□□□ 1.15
LINC01238-205ENST00000567549 MMP19Q99542 508 aa22.21■■□□□ 1.15
LINC01238-205ENST00000567549 LBHD1Q9BQE6 289 aaPredicted RBP22.21■■□□□ 1.15
LINC01238-205ENST00000567549 SENP6Q9GZR1 1112 aaPredicted RBP22.21■■□□□ 1.15
LINC01238-205ENST00000567549 PPP1R9AQ9ULJ8 1098 aa22.21■■□□□ 1.15
LINC01238-205ENST00000567549 ADAMTS5Q9UNA0 930 aa22.21■■□□□ 1.15
LINC01238-205ENST00000567549 DIS3Q9Y2L1 958 aaKnown RBP22.21■■□□□ 1.15
LINC01238-205ENST00000567549 PARP14Q460N5 1801 aa22.21■■□□□ 1.15
LINC01238-205ENST00000567549 STAT3P40763 770 aa22.2■■□□□ 1.14
LINC01238-205ENST00000567549 PDE4BQ07343 736 aa22.2■■□□□ 1.14
LINC01238-205ENST00000567549 CLEC10AQ8IUN9 316 aa22.2■■□□□ 1.14
LINC01238-205ENST00000567549 TDHQ8IZJ6 230 aa22.2■■□□□ 1.14
LINC01238-205ENST00000567549 UBE2OQ9C0C9 1292 aaKnown RBP22.2■■□□□ 1.14
LINC01238-205ENST00000567549 GSG1L2A8MUP6 293 aa22.19■■□□□ 1.14
LINC01238-205ENST00000567549 VWA5AO00534 786 aa22.19■■□□□ 1.14
LINC01238-205ENST00000567549 SYN1P17600 705 aa22.19■■□□□ 1.14
LINC01238-205ENST00000567549 MAGEA10P43363 369 aaPredicted RBP22.19■■□□□ 1.14
LINC01238-205ENST00000567549 TMEM132BQ14DG7 1078 aa22.19■■□□□ 1.14
LINC01238-205ENST00000567549 KIAA1755Q5JYT7 1200 aa22.19■■□□□ 1.14
LINC01238-205ENST00000567549 SLF1Q9BQI6 1058 aa22.19■■□□□ 1.14
LINC01238-205ENST00000567549 PATL2C9JE40 543 aaKnown RBP22.18■■□□□ 1.14
LINC01238-205ENST00000567549 RASA1P20936 1047 aa22.18■■□□□ 1.14
LINC01238-205ENST00000567549 LRRC26Q2I0M4 334 aa22.18■■□□□ 1.14
LINC01238-205ENST00000567549 FAM83BQ5T0W9 1011 aa22.18■■□□□ 1.14
LINC01238-205ENST00000567549 PRPF38AQ8NAV1 312 aaKnown RBP22.18■■□□□ 1.14
LINC01238-205ENST00000567549 OSBP2Q969R2 916 aa22.18■■□□□ 1.14
LINC01238-205ENST00000567549 MAML3Q96JK9 1138 aa22.18■■□□□ 1.14
LINC01238-205ENST00000567549 FSD1Q9BTV5 496 aa22.18■■□□□ 1.14
LINC01238-205ENST00000567549 TEX13BQ9BXU2 312 aa22.18■■□□□ 1.14
LINC01238-205ENST00000567549 ZNFX1Q9P2E3 1918 aaKnown RBP22.18■■□□□ 1.14
LINC01238-205ENST00000567549 IGHA2P01877 340 aa22.17■■□□□ 1.14
LINC01238-205ENST00000567549 CENPBP07199 599 aaPredicted RBP22.17■■□□□ 1.14
LINC01238-205ENST00000567549 FDX1P10109 184 aa22.17■■□□□ 1.14
LINC01238-205ENST00000567549 LRIT3Q3SXY7 679 aa22.17■■□□□ 1.14
LINC01238-205ENST00000567549 MSL3Q8N5Y2 521 aaKnown RBP22.17■■□□□ 1.14
LINC01238-205ENST00000567549 CNPY2Q9Y2B0 182 aa22.17■■□□□ 1.14
LINC01238-205ENST00000567549 GREB1LQ9C091 1923 aaPredicted RBP22.17■■□□□ 1.14
LINC01238-205ENST00000567549 COL11A1P12107 1806 aaPredicted RBP22.17■■□□□ 1.14
LINC01238-205ENST00000567549 COBLO75128 1261 aa22.16■■□□□ 1.14
LINC01238-205ENST00000567549 ZBED4O75132 1171 aa22.16■■□□□ 1.14
LINC01238-205ENST00000567549 RARBP10826 455 aa22.16■■□□□ 1.14
LINC01238-205ENST00000567549 NAPBQ9H115 298 aa22.16■■□□□ 1.14
LINC01238-205ENST00000567549 FBXO40Q9UH90 709 aa22.16■■□□□ 1.14
LINC01238-205ENST00000567549 F5H6K3 240 aa22.15■■□□□ 1.14
LINC01238-205ENST00000567549 TTLL1O95922 423 aa22.15■■□□□ 1.14
LINC01238-205ENST00000567549 TSPY3P0CV98 308 aa22.15■■□□□ 1.14
LINC01238-205ENST00000567549 TSPY8P0CW00 308 aa22.15■■□□□ 1.14
LINC01238-205ENST00000567549 MX1P20591 662 aa22.15■■□□□ 1.14
LINC01238-205ENST00000567549 KLRC3Q07444 240 aa22.15■■□□□ 1.14
LINC01238-205ENST00000567549 DDX11Q96FC9 970 aa22.15■■□□□ 1.14
LINC01238-205ENST00000567549 FEM1BQ9UK73 627 aa22.15■■□□□ 1.14
LINC01238-205ENST00000567549 MYH4Q9Y623 1939 aa22.15■■□□□ 1.14
LINC01238-205ENST00000567549 CHGBP05060 677 aa22.14■■□□□ 1.13
LINC01238-205ENST00000567549 RNF180Q86T96 592 aa22.14■■□□□ 1.13
LINC01238-205ENST00000567549 IFNL3Q8IZI9 196 aa22.14■■□□□ 1.13
LINC01238-205ENST00000567549 TRPV1Q8NER1 839 aa22.14■■□□□ 1.13
LINC01238-205ENST00000567549 TINF2Q9BSI4 451 aa22.14■■□□□ 1.13
LINC01238-205ENST00000567549 FBXO28Q9NVF7 368 aa22.14■■□□□ 1.13
LINC01238-205ENST00000567549 CLIP2Q9UDT6 1046 aa22.14■■□□□ 1.13
LINC01238-205ENST00000567549 ZNF214Q9UL59 606 aaPredicted RBP22.14■■□□□ 1.13
LINC01238-205ENST00000567549 RANBP2P49792 3224 aaKnown RBP22.14■■□□□ 1.13
LINC01238-205ENST00000567549 PLXNA1Q9UIW2 1896 aa22.13■■□□□ 1.13
LINC01238-205ENST00000567549 ATP2A1O14983 1001 aa22.13■■□□□ 1.13
LINC01238-205ENST00000567549 MYCNP04198 464 aaPredicted RBP22.13■■□□□ 1.13
LINC01238-205ENST00000567549 OAZ1P54368 228 aa22.13■■□□□ 1.13
LINC01238-205ENST00000567549 GJC2Q5T442 439 aaPredicted RBP22.13■■□□□ 1.13
LINC01238-205ENST00000567549 SNRNP48Q6IEG0 339 aaKnown RBP22.13■■□□□ 1.13
LINC01238-205ENST00000567549 TICAM2Q86XR7 235 aa22.13■■□□□ 1.13
LINC01238-205ENST00000567549 MKL1Q969V6 931 aa22.13■■□□□ 1.13
LINC01238-205ENST00000567549 NDUFB10O96000 172 aa22.12■■□□□ 1.13
LINC01238-205ENST00000567549 AKR1A1P14550 325 aa22.12■■□□□ 1.13
LINC01238-205ENST00000567549 ATN1P54259 1190 aaPredicted RBP22.12■■□□□ 1.13
LINC01238-205ENST00000567549 RTP1P59025 263 aa22.12■■□□□ 1.13
LINC01238-205ENST00000567549 AAMPQ13685 434 aa22.12■■□□□ 1.13
LINC01238-205ENST00000567549 TSHZ3Q63HK5 1081 aa22.12■■□□□ 1.13
LINC01238-205ENST00000567549 STK11IPQ8N1F8 1099 aa22.12■■□□□ 1.13
LINC01238-205ENST00000567549 GMCL1P1Q8NEA9 526 aa22.12■■□□□ 1.13
LINC01238-205ENST00000567549 YTHDC1Q96MU7 727 aaKnown RBP22.12■■□□□ 1.13
LINC01238-205ENST00000567549 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.12■■□□□ 1.13
LINC01238-205ENST00000567549 MTMR4Q9NYA4 1195 aa22.12■■□□□ 1.13
LINC01238-205ENST00000567549 PLIN4Q96Q06 1357 aa22.12■■□□□ 1.13
LINC01238-205ENST00000567549 SMIM22K7EJ46 135 aa22.11■■□□□ 1.13
LINC01238-205ENST00000567549 ZNF792Q3KQV3 632 aa22.11■■□□□ 1.13
LINC01238-205ENST00000567549 EPB41L4AQ9HCS5 686 aaPredicted RBP22.11■■□□□ 1.13
LINC01238-205ENST00000567549 XPNPEP3Q9NQH7 507 aa22.11■■□□□ 1.13
LINC01238-205ENST00000567549 ATP11BQ9Y2G3 1177 aa22.11■■□□□ 1.13
LINC01238-205ENST00000567549 SYNGAP1Q96PV0 1343 aa22.1■■□□□ 1.13
LINC01238-205ENST00000567549 M0R2C6 588 aa22.1■■□□□ 1.13
LINC01238-205ENST00000567549 RRP1P56182 461 aaKnown RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms