RNA–Protein interactions for RNA: ENST00000565844.1

KNOP1-203, Transcript of lysine rich nucleolar protein 1, humanhuman

TSL 5

Gene KNOP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-203ENST00000565844 CCL15-CCL14A0A0B4J2E2 113 aa17.83■□□□□ 0.45
KNOP1-203ENST00000565844 DDAH1O94760 285 aa17.83■□□□□ 0.45
KNOP1-203ENST00000565844 BACE1P56817 501 aa17.83■□□□□ 0.45
KNOP1-203ENST00000565844 CCL15Q16663 113 aa17.83■□□□□ 0.45
KNOP1-203ENST00000565844 MICU3Q86XE3 530 aa17.83■□□□□ 0.45
KNOP1-203ENST00000565844 RAB11FIP4Q86YS3 637 aa17.83■□□□□ 0.45
KNOP1-203ENST00000565844 NUP133Q8WUM0 1156 aa17.83■□□□□ 0.45
KNOP1-203ENST00000565844 BRI3BPQ8WY22 251 aa17.83■□□□□ 0.45
KNOP1-203ENST00000565844 CHMP4CQ96CF2 233 aa17.83■□□□□ 0.45
KNOP1-203ENST00000565844 MS4A4AQ96JQ5 239 aa17.83■□□□□ 0.45
KNOP1-203ENST00000565844 VCPKMTQ9H867 229 aa17.83■□□□□ 0.45
KNOP1-203ENST00000565844 TPCN1Q9ULQ1 816 aa17.83■□□□□ 0.45
KNOP1-203ENST00000565844 LIMCH1Q9UPQ0 1083 aa17.83■□□□□ 0.45
KNOP1-203ENST00000565844 HTTP42858 3142 aa17.82■□□□□ 0.44
KNOP1-203ENST00000565844 C19orf81C9J6K1 198 aa17.82■□□□□ 0.44
KNOP1-203ENST00000565844 F5H6K3 240 aa17.82■□□□□ 0.44
KNOP1-203ENST00000565844 ZBTB43O43298 467 aa17.82■□□□□ 0.44
KNOP1-203ENST00000565844 NDUFB10O96000 172 aa17.82■□□□□ 0.44
KNOP1-203ENST00000565844 CALM1P0DP23 149 aa17.82■□□□□ 0.44
KNOP1-203ENST00000565844 CALM2P0DP24 149 aa17.82■□□□□ 0.44
KNOP1-203ENST00000565844 CALM3P0DP25 149 aa17.82■□□□□ 0.44
KNOP1-203ENST00000565844 RXRAP19793 462 aa17.82■□□□□ 0.44
KNOP1-203ENST00000565844 MCM2P49736 904 aa17.82■□□□□ 0.44
KNOP1-203ENST00000565844 USP14P54578 494 aa17.82■□□□□ 0.44
KNOP1-203ENST00000565844 HMGCS2P54868 508 aa17.82■□□□□ 0.44
KNOP1-203ENST00000565844 EVCP57679 992 aa17.82■□□□□ 0.44
KNOP1-203ENST00000565844 KLRC3Q07444 240 aa17.82■□□□□ 0.44
KNOP1-203ENST00000565844 SLFN13Q68D06 897 aa17.82■□□□□ 0.44
KNOP1-203ENST00000565844 USP17L2Q6R6M4 530 aa17.82■□□□□ 0.44
KNOP1-203ENST00000565844 RASGRP2Q7LDG7 609 aa17.82■□□□□ 0.44
KNOP1-203ENST00000565844 SPICE1Q8N0Z3 855 aa17.82■□□□□ 0.44
KNOP1-203ENST00000565844 CD99L2Q8TCZ2 262 aa17.82■□□□□ 0.44
KNOP1-203ENST00000565844 CFHR5Q9BXR6 569 aa17.82■□□□□ 0.44
KNOP1-203ENST00000565844 CENPFP49454 3210 aa17.82■□□□□ 0.44
KNOP1-203ENST00000565844 CXCL11O14625 94 aa17.81■□□□□ 0.44
KNOP1-203ENST00000565844 PDIA3P30101 505 aaKnown RBP17.81■□□□□ 0.44
KNOP1-203ENST00000565844 TROAPQ12815 778 aa17.81■□□□□ 0.44
KNOP1-203ENST00000565844 STK3Q13188 491 aa17.81■□□□□ 0.44
KNOP1-203ENST00000565844 CCDC144CPQ8IYA2 1237 aa17.81■□□□□ 0.44
KNOP1-203ENST00000565844 ZNF274Q96GC6 653 aaPredicted RBP17.81■□□□□ 0.44
KNOP1-203ENST00000565844 TMOD4Q9NZQ9 345 aa17.81■□□□□ 0.44
KNOP1-203ENST00000565844 ISY1Q9ULR0 285 aaKnown RBP17.81■□□□□ 0.44
KNOP1-203ENST00000565844 KCNH4Q9UQ05 1017 aa17.81■□□□□ 0.44
KNOP1-203ENST00000565844 TRIM17Q9Y577 477 aa17.81■□□□□ 0.44
KNOP1-203ENST00000565844 GOLGA8AA7E2F4 631 aa17.8■□□□□ 0.44
KNOP1-203ENST00000565844 ECM2O94769 699 aaPredicted RBP17.8■□□□□ 0.44
KNOP1-203ENST00000565844 LARGE1O95461 756 aa17.8■□□□□ 0.44
KNOP1-203ENST00000565844 PDHBP11177 359 aa17.8■□□□□ 0.44
KNOP1-203ENST00000565844 SLC1A4P43007 532 aa17.8■□□□□ 0.44
KNOP1-203ENST00000565844 RGS19P49795 217 aa17.8■□□□□ 0.44
KNOP1-203ENST00000565844 CAP1Q01518 475 aa17.8■□□□□ 0.44
KNOP1-203ENST00000565844 SNAPC2Q13487 334 aa17.8■□□□□ 0.44
KNOP1-203ENST00000565844 CCDC96Q2M329 555 aa17.8■□□□□ 0.44
KNOP1-203ENST00000565844 KIAA1755Q5JYT7 1200 aa17.8■□□□□ 0.44
KNOP1-203ENST00000565844 OTUD7BQ6GQQ9 843 aa17.8■□□□□ 0.44
KNOP1-203ENST00000565844 FAM43AQ8N2R8 423 aa17.8■□□□□ 0.44
KNOP1-203ENST00000565844 LPAR1Q92633 364 aa17.8■□□□□ 0.44
KNOP1-203ENST00000565844 GMCL1Q96IK5 515 aa17.8■□□□□ 0.44
KNOP1-203ENST00000565844 EMILIN3Q9NT22 766 aa17.8■□□□□ 0.44
KNOP1-203ENST00000565844 PARP14Q460N5 1801 aa17.8■□□□□ 0.44
KNOP1-203ENST00000565844 A0A0G2JLL6 359 aaPredicted RBP17.79■□□□□ 0.44
KNOP1-203ENST00000565844 TESPA1A2RU30 521 aaPredicted RBP17.79■□□□□ 0.44
KNOP1-203ENST00000565844 METAP2P50579 478 aaKnown RBP eCLIP17.79■□□□□ 0.44
KNOP1-203ENST00000565844 GTF2A2P52657 109 aa17.79■□□□□ 0.44
KNOP1-203ENST00000565844 RCAN1P53805 252 aa17.79■□□□□ 0.44
KNOP1-203ENST00000565844 GRM4Q14833 912 aa17.79■□□□□ 0.44
KNOP1-203ENST00000565844 TAF1CQ15572 869 aaPredicted RBP17.79■□□□□ 0.44
KNOP1-203ENST00000565844 ME3Q16798 604 aa17.79■□□□□ 0.44
KNOP1-203ENST00000565844 NOM1Q5C9Z4 860 aaKnown RBP17.79■□□□□ 0.44
KNOP1-203ENST00000565844 SH3D19Q5HYK7 790 aa17.79■□□□□ 0.44
KNOP1-203ENST00000565844 PRRT2Q7Z6L0 340 aaPredicted RBP17.79■□□□□ 0.44
KNOP1-203ENST00000565844 HSCBQ8IWL3 235 aa17.79■□□□□ 0.44
KNOP1-203ENST00000565844 CTCFLQ8NI51 663 aaPredicted RBP17.79■□□□□ 0.44
KNOP1-203ENST00000565844 DCAF4Q8WV16 495 aa17.79■□□□□ 0.44
KNOP1-203ENST00000565844 SNX21Q969T3 373 aa17.79■□□□□ 0.44
KNOP1-203ENST00000565844 ZSCAN31Q96LW9 406 aaPredicted RBP17.79■□□□□ 0.44
KNOP1-203ENST00000565844 NUP88Q99567 741 aaPredicted RBP17.79■□□□□ 0.44
KNOP1-203ENST00000565844 SLKQ9H2G2 1235 aaPredicted RBP17.79■□□□□ 0.44
KNOP1-203ENST00000565844 FRMPD2Q68DX3 1309 aaPredicted RBP17.79■□□□□ 0.44
KNOP1-203ENST00000565844 NID2Q14112 1375 aa17.79■□□□□ 0.44
KNOP1-203ENST00000565844 PARP1P09874 1014 aaKnown RBP17.79■□□□□ 0.44
KNOP1-203ENST00000565844 SNHG28P0DPA3 235 aa17.79■□□□□ 0.44
KNOP1-203ENST00000565844 VCAM1P19320 739 aa17.79■□□□□ 0.44
KNOP1-203ENST00000565844 KIF5BP33176 963 aa17.79■□□□□ 0.44
KNOP1-203ENST00000565844 PKN2Q16513 984 aaKnown RBP17.79■□□□□ 0.44
KNOP1-203ENST00000565844 RTN1Q16799 776 aa17.79■□□□□ 0.44
KNOP1-203ENST00000565844 FBXO46Q6PJ61 603 aaPredicted RBP17.79■□□□□ 0.44
KNOP1-203ENST00000565844 GADL1Q6ZQY3 521 aa17.79■□□□□ 0.44
KNOP1-203ENST00000565844 OTOP1Q7RTM1 612 aa17.79■□□□□ 0.44
KNOP1-203ENST00000565844 FANCBQ8NB91 859 aa17.79■□□□□ 0.44
KNOP1-203ENST00000565844 C12orf42Q96LP6 360 aa17.79■□□□□ 0.44
KNOP1-203ENST00000565844 WDR46O15213 610 aaKnown RBP17.78■□□□□ 0.44
KNOP1-203ENST00000565844 GOLGA8HP0CJ92 632 aa17.78■□□□□ 0.44
KNOP1-203ENST00000565844 CETPP11597 493 aa17.78■□□□□ 0.44
KNOP1-203ENST00000565844 BMP3P12645 472 aa17.78■□□□□ 0.44
KNOP1-203ENST00000565844 ANP32AP39687 249 aaKnown RBP17.78■□□□□ 0.44
KNOP1-203ENST00000565844 CCT2P78371 535 aaKnown RBP17.78■□□□□ 0.44
KNOP1-203ENST00000565844 ZNF543Q08ER8 600 aa17.78■□□□□ 0.44
KNOP1-203ENST00000565844 ASPRV1Q53RT3 343 aa17.78■□□□□ 0.44
KNOP1-203ENST00000565844 FAM83BQ5T0W9 1011 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms