RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 SYNPO2Q9UMS6 1093 aa23.52■■□□□ 1.36
TSPAN3-210ENST00000561277 PARP14Q460N5 1801 aa23.52■■□□□ 1.36
TSPAN3-210ENST00000561277 A0A0G2JMZ2 1700 aa23.51■■□□□ 1.35
TSPAN3-210ENST00000561277 FLT3LGP49771 235 aa23.51■■□□□ 1.35
TSPAN3-210ENST00000561277 SLFN13Q68D06 897 aa23.51■■□□□ 1.35
TSPAN3-210ENST00000561277 MTMR7Q9Y216 660 aa23.51■■□□□ 1.35
TSPAN3-210ENST00000561277 U3KPZ7 1027 aaPredicted RBP23.51■■□□□ 1.35
TSPAN3-210ENST00000561277 KDM4AO75164 1064 aa23.5■■□□□ 1.35
TSPAN3-210ENST00000561277 KIAA1211Q6ZU35 1233 aa23.5■■□□□ 1.35
TSPAN3-210ENST00000561277 SH3TC2Q8TF17 1288 aa23.5■■□□□ 1.35
TSPAN3-210ENST00000561277 CWC22Q9HCG8 908 aaKnown RBP23.5■■□□□ 1.35
TSPAN3-210ENST00000561277 B4E1Z4 1266 aa23.49■■□□□ 1.35
TSPAN3-210ENST00000561277 CCNA1P78396 465 aa23.49■■□□□ 1.35
TSPAN3-210ENST00000561277 WDR78Q5VTH9 848 aa23.49■■□□□ 1.35
TSPAN3-210ENST00000561277 ZKSCAN3Q9BRR0 538 aa23.49■■□□□ 1.35
TSPAN3-210ENST00000561277 BRCA2P51587 3418 aa23.48■■□□□ 1.35
TSPAN3-210ENST00000561277 CDC45O75419 566 aa23.48■■□□□ 1.35
TSPAN3-210ENST00000561277 CYP21A2P08686 494 aa23.48■■□□□ 1.35
TSPAN3-210ENST00000561277 MAPK4P31152 587 aa23.48■■□□□ 1.35
TSPAN3-210ENST00000561277 PLS1Q14651 629 aa23.48■■□□□ 1.35
TSPAN3-210ENST00000561277 CASC1Q6TDU7 716 aa23.48■■□□□ 1.35
TSPAN3-210ENST00000561277 TCP11L1Q9NUJ3 509 aa23.48■■□□□ 1.35
TSPAN3-210ENST00000561277 PPP1R9AQ9ULJ8 1098 aa23.48■■□□□ 1.35
TSPAN3-210ENST00000561277 DOCK3Q8IZD9 2030 aa23.48■■□□□ 1.35
TSPAN3-210ENST00000561277 RASGRP2Q7LDG7 609 aa23.48■■□□□ 1.35
TSPAN3-210ENST00000561277 MB21D1Q8N884 522 aa23.48■■□□□ 1.35
TSPAN3-210ENST00000561277 MAP4K1Q92918 833 aa23.48■■□□□ 1.35
TSPAN3-210ENST00000561277 SLF1Q9BQI6 1058 aa23.48■■□□□ 1.35
TSPAN3-210ENST00000561277 CNNM2Q9H8M5 875 aa23.48■■□□□ 1.35
TSPAN3-210ENST00000561277 ANO2Q9NQ90 1003 aa23.48■■□□□ 1.35
TSPAN3-210ENST00000561277 RBM8AQ9Y5S9 174 aaKnown RBP23.48■■□□□ 1.35
TSPAN3-210ENST00000561277 MYCP01106 439 aaPredicted RBP23.47■■□□□ 1.35
TSPAN3-210ENST00000561277 BMP3P12645 472 aa23.47■■□□□ 1.35
TSPAN3-210ENST00000561277 MCCP23508 829 aa23.47■■□□□ 1.35
TSPAN3-210ENST00000561277 SLC1A4P43007 532 aa23.47■■□□□ 1.35
TSPAN3-210ENST00000561277 NOVP48745 357 aa23.47■■□□□ 1.35
TSPAN3-210ENST00000561277 SOX10P56693 466 aa23.47■■□□□ 1.35
TSPAN3-210ENST00000561277 GPR142Q7Z601 462 aa23.47■■□□□ 1.35
TSPAN3-210ENST00000561277 GMCL1Q96IK5 515 aa23.47■■□□□ 1.35
TSPAN3-210ENST00000561277 TMEM47Q9BQJ4 181 aa23.47■■□□□ 1.35
TSPAN3-210ENST00000561277 KRT23Q9C075 422 aa23.47■■□□□ 1.35
TSPAN3-210ENST00000561277 LSG1Q9H089 658 aaKnown RBP23.47■■□□□ 1.35
TSPAN3-210ENST00000561277 SPATC1LQ9H0A9 340 aa23.47■■□□□ 1.35
TSPAN3-210ENST00000561277 TOP1P11387 765 aaKnown RBP23.46■■□□□ 1.35
TSPAN3-210ENST00000561277 GRK4P32298 578 aa23.46■■□□□ 1.35
TSPAN3-210ENST00000561277 NBPF11Q86T75 865 aa23.46■■□□□ 1.35
TSPAN3-210ENST00000561277 IQCA1Q86XH1 822 aa23.46■■□□□ 1.35
TSPAN3-210ENST00000561277 KIFC2Q96AC6 838 aa23.46■■□□□ 1.35
TSPAN3-210ENST00000561277 ARMC5Q96C12 935 aa23.46■■□□□ 1.35
TSPAN3-210ENST00000561277 MOV10L1Q9BXT6 1211 aaKnown RBP23.46■■□□□ 1.35
TSPAN3-210ENST00000561277 TAF6LQ9Y6J9 622 aa23.46■■□□□ 1.35
TSPAN3-210ENST00000561277 COL11A1P12107 1806 aaPredicted RBP23.45■■□□□ 1.35
TSPAN3-210ENST00000561277 VWA5AO00534 786 aa23.45■■□□□ 1.34
TSPAN3-210ENST00000561277 NT5C2P49902 561 aa23.45■■□□□ 1.34
TSPAN3-210ENST00000561277 IKQ13123 557 aaPredicted RBP23.45■■□□□ 1.34
TSPAN3-210ENST00000561277 TMEM132BQ14DG7 1078 aa23.45■■□□□ 1.34
TSPAN3-210ENST00000561277 PLEKHH3Q7Z736 793 aa23.45■■□□□ 1.34
TSPAN3-210ENST00000561277 ZSWIM5Q9P217 1185 aa23.45■■□□□ 1.34
TSPAN3-210ENST00000561277 FEM1BQ9UK73 627 aa23.45■■□□□ 1.34
TSPAN3-210ENST00000561277 ADCY3O60266 1144 aa23.44■■□□□ 1.34
TSPAN3-210ENST00000561277 ELNP15502 786 aa23.44■■□□□ 1.34
TSPAN3-210ENST00000561277 TRDNQ13061 729 aa23.44■■□□□ 1.34
TSPAN3-210ENST00000561277 RCSD1Q6JBY9 416 aa23.44■■□□□ 1.34
TSPAN3-210ENST00000561277 KCTD1Q719H9 257 aa23.44■■□□□ 1.34
TSPAN3-210ENST00000561277 PRPF38AQ8NAV1 312 aaKnown RBP23.44■■□□□ 1.34
TSPAN3-210ENST00000561277 ZNF333Q96JL9 665 aa23.44■■□□□ 1.34
TSPAN3-210ENST00000561277 BIN2Q9UBW5 565 aaPredicted RBP23.44■■□□□ 1.34
TSPAN3-210ENST00000561277 GJD2Q9UKL4 321 aa23.44■■□□□ 1.34
TSPAN3-210ENST00000561277 ADAMTS5Q9UNA0 930 aa23.44■■□□□ 1.34
TSPAN3-210ENST00000561277 PLXNB2O15031 1838 aa23.44■■□□□ 1.34
TSPAN3-210ENST00000561277 TMEM232C9JQI7 657 aa23.44■■□□□ 1.34
TSPAN3-210ENST00000561277 IRF5Q13568 498 aa23.44■■□□□ 1.34
TSPAN3-210ENST00000561277 CCDC96Q2M329 555 aa23.44■■□□□ 1.34
TSPAN3-210ENST00000561277 SLAIN1Q8ND83 568 aa23.44■■□□□ 1.34
TSPAN3-210ENST00000561277 SOCS4Q8WXH5 440 aa23.44■■□□□ 1.34
TSPAN3-210ENST00000561277 NUDT12Q9BQG2 462 aa23.44■■□□□ 1.34
TSPAN3-210ENST00000561277 ERCC3P19447 782 aa23.43■■□□□ 1.34
TSPAN3-210ENST00000561277 STAT2P52630 851 aa23.43■■□□□ 1.34
TSPAN3-210ENST00000561277 NCAPG2Q86XI2 1143 aa23.43■■□□□ 1.34
TSPAN3-210ENST00000561277 TTC14Q96N46 770 aa23.43■■□□□ 1.34
TSPAN3-210ENST00000561277 ZSCAN10Q96SZ4 725 aaPredicted RBP23.43■■□□□ 1.34
TSPAN3-210ENST00000561277 UBAC1Q9BSL1 405 aa23.43■■□□□ 1.34
TSPAN3-210ENST00000561277 IVNS1ABPQ9Y6Y0 642 aa23.43■■□□□ 1.34
TSPAN3-210ENST00000561277 TNKSO95271 1327 aa23.42■■□□□ 1.34
TSPAN3-210ENST00000561277 E7EWF7 191 aa23.42■■□□□ 1.34
TSPAN3-210ENST00000561277 CYP2B6P20813 491 aa23.42■■□□□ 1.34
TSPAN3-210ENST00000561277 ZNF214Q9UL59 606 aaPredicted RBP23.42■■□□□ 1.34
TSPAN3-210ENST00000561277 CTDP1Q9Y5B0 961 aaPredicted RBP23.42■■□□□ 1.34
TSPAN3-210ENST00000561277 STOX1Q6ZVD7 989 aa23.41■■□□□ 1.34
TSPAN3-210ENST00000561277 RALYLQ86SE5 291 aaKnown RBP23.41■■□□□ 1.34
TSPAN3-210ENST00000561277 DGKHQ86XP1 1220 aa23.41■■□□□ 1.34
TSPAN3-210ENST00000561277 REPS2Q8NFH8 660 aa23.41■■□□□ 1.34
TSPAN3-210ENST00000561277 DCAF4Q8WV16 495 aa23.41■■□□□ 1.34
TSPAN3-210ENST00000561277 FRMPD2Q68DX3 1309 aaPredicted RBP23.41■■□□□ 1.34
TSPAN3-210ENST00000561277 CCDC178Q5BJE1 867 aa23.4■■□□□ 1.34
TSPAN3-210ENST00000561277 CYB5R4Q7L1T6 521 aa23.4■■□□□ 1.34
TSPAN3-210ENST00000561277 ENAHQ8N8S7 591 aaPredicted RBP23.4■■□□□ 1.34
TSPAN3-210ENST00000561277 SHCBP1Q8NEM2 672 aa23.4■■□□□ 1.34
TSPAN3-210ENST00000561277 PXYLP1Q8TE99 480 aa23.4■■□□□ 1.34
TSPAN3-210ENST00000561277 ZBED4O75132 1171 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms