RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 B4E1Z4 1266 aa18.29■□□□□ 0.52
RABGGTA-219ENST00000560871 TNPO2O14787 897 aaKnown RBP18.29■□□□□ 0.52
RABGGTA-219ENST00000560871 RCSD1Q6JBY9 416 aa18.29■□□□□ 0.52
RABGGTA-219ENST00000560871 KIAA1211Q6ZU35 1233 aa18.29■□□□□ 0.52
RABGGTA-219ENST00000560871 STOX1Q6ZVD7 989 aa18.29■□□□□ 0.52
RABGGTA-219ENST00000560871 GTF3C2Q8WUA4 911 aaPredicted RBP18.29■□□□□ 0.52
RABGGTA-219ENST00000560871 CNNM2Q9H8M5 875 aa18.29■□□□□ 0.52
RABGGTA-219ENST00000560871 KDM4AO75164 1064 aa18.28■□□□□ 0.52
RABGGTA-219ENST00000560871 CNMDO75829 334 aa18.28■□□□□ 0.52
RABGGTA-219ENST00000560871 FLT3LGP49771 235 aa18.28■□□□□ 0.52
RABGGTA-219ENST00000560871 IRF5Q13568 498 aa18.28■□□□□ 0.52
RABGGTA-219ENST00000560871 NECTIN1Q15223 517 aa18.28■□□□□ 0.52
RABGGTA-219ENST00000560871 COA7Q96BR5 231 aa18.28■□□□□ 0.52
RABGGTA-219ENST00000560871 KRT23Q9C075 422 aa18.28■□□□□ 0.52
RABGGTA-219ENST00000560871 TANGO6Q9C0B7 1094 aa18.28■□□□□ 0.52
RABGGTA-219ENST00000560871 TXNRD2Q9NNW7 524 aa18.28■□□□□ 0.52
RABGGTA-219ENST00000560871 RBPJLQ9UBG7 517 aa18.28■□□□□ 0.52
RABGGTA-219ENST00000560871 E7EWF7 191 aa18.27■□□□□ 0.52
RABGGTA-219ENST00000560871 PEX10O60683 326 aa18.27■□□□□ 0.52
RABGGTA-219ENST00000560871 MYCP01106 439 aaPredicted RBP18.27■□□□□ 0.52
RABGGTA-219ENST00000560871 MTFR1Q15390 333 aa18.27■□□□□ 0.52
RABGGTA-219ENST00000560871 FAM83BQ5T0W9 1011 aa18.27■□□□□ 0.52
RABGGTA-219ENST00000560871 SLAIN1Q8ND83 568 aa18.27■□□□□ 0.52
RABGGTA-219ENST00000560871 PXYLP1Q8TE99 480 aa18.27■□□□□ 0.52
RABGGTA-219ENST00000560871 NUP88Q99567 741 aaPredicted RBP18.27■□□□□ 0.52
RABGGTA-219ENST00000560871 KIAA0100Q14667 2235 aaKnown RBP18.27■□□□□ 0.52
RABGGTA-219ENST00000560871 SLC27A2O14975 620 aa18.26■□□□□ 0.51
RABGGTA-219ENST00000560871 ADCY3O60266 1144 aa18.26■□□□□ 0.51
RABGGTA-219ENST00000560871 DSG3P32926 999 aa18.26■□□□□ 0.51
RABGGTA-219ENST00000560871 COG2Q14746 738 aa18.26■□□□□ 0.51
RABGGTA-219ENST00000560871 CREB3L3Q68CJ9 461 aa18.26■□□□□ 0.51
RABGGTA-219ENST00000560871 RASGRP2Q7LDG7 609 aa18.26■□□□□ 0.51
RABGGTA-219ENST00000560871 GMCL1Q96IK5 515 aa18.26■□□□□ 0.51
RABGGTA-219ENST00000560871 TMEM47Q9BQJ4 181 aa18.26■□□□□ 0.51
RABGGTA-219ENST00000560871 ZKSCAN3Q9BRR0 538 aa18.26■□□□□ 0.51
RABGGTA-219ENST00000560871 FBXO28Q9NVF7 368 aa18.26■□□□□ 0.51
RABGGTA-219ENST00000560871 ZSWIM5Q9P217 1185 aa18.26■□□□□ 0.51
RABGGTA-219ENST00000560871 RABGAP1Q9Y3P9 1069 aa18.26■□□□□ 0.51
RABGGTA-219ENST00000560871 RAD21O60216 631 aa18.25■□□□□ 0.51
RABGGTA-219ENST00000560871 FLOT1O75955 427 aa18.25■□□□□ 0.51
RABGGTA-219ENST00000560871 ERVK-9P63128 1117 aa18.25■□□□□ 0.51
RABGGTA-219ENST00000560871 ERVK-24P63145 666 aa18.25■□□□□ 0.51
RABGGTA-219ENST00000560871 UBXN2AP68543 259 aa18.25■□□□□ 0.51
RABGGTA-219ENST00000560871 Q3C1V9 767 aa18.25■□□□□ 0.51
RABGGTA-219ENST00000560871 SLFN13Q68D06 897 aa18.25■□□□□ 0.51
RABGGTA-219ENST00000560871 CYB5R4Q7L1T6 521 aa18.25■□□□□ 0.51
RABGGTA-219ENST00000560871 IQCA1Q86XH1 822 aa18.25■□□□□ 0.51
RABGGTA-219ENST00000560871 ATG4CQ96DT6 458 aa18.25■□□□□ 0.51
RABGGTA-219ENST00000560871 TTC14Q96N46 770 aa18.25■□□□□ 0.51
RABGGTA-219ENST00000560871 PAGR1Q9BTK6 254 aa18.25■□□□□ 0.51
RABGGTA-219ENST00000560871 BTBD7Q9P203 1132 aa18.25■□□□□ 0.51
RABGGTA-219ENST00000560871 GJD2Q9UKL4 321 aa18.25■□□□□ 0.51
RABGGTA-219ENST00000560871 TNKSO95271 1327 aa18.24■□□□□ 0.51
RABGGTA-219ENST00000560871 CENPFP49454 3210 aa18.24■□□□□ 0.51
RABGGTA-219ENST00000560871 TOP1P11387 765 aaKnown RBP18.24■□□□□ 0.51
RABGGTA-219ENST00000560871 CCL5P13501 91 aa18.24■□□□□ 0.51
RABGGTA-219ENST00000560871 DGKHQ86XP1 1220 aa18.24■□□□□ 0.51
RABGGTA-219ENST00000560871 MB21D2Q8IYB1 491 aaPredicted RBP18.24■□□□□ 0.51
RABGGTA-219ENST00000560871 GPRC5AQ8NFJ5 357 aa18.24■□□□□ 0.51
RABGGTA-219ENST00000560871 ANKS1AQ92625 1134 aa18.24■□□□□ 0.51
RABGGTA-219ENST00000560871 ZSCAN10Q96SZ4 725 aaPredicted RBP18.24■□□□□ 0.51
RABGGTA-219ENST00000560871 BIN2Q9UBW5 565 aaPredicted RBP18.24■□□□□ 0.51
RABGGTA-219ENST00000560871 PPP1R9AQ9ULJ8 1098 aa18.24■□□□□ 0.51
RABGGTA-219ENST00000560871 ADAMTS5Q9UNA0 930 aa18.24■□□□□ 0.51
RABGGTA-219ENST00000560871 BMP3P12645 472 aa18.23■□□□□ 0.51
RABGGTA-219ENST00000560871 ELNP15502 786 aa18.23■□□□□ 0.51
RABGGTA-219ENST00000560871 TRDNQ13061 729 aa18.23■□□□□ 0.51
RABGGTA-219ENST00000560871 ENAHQ8N8S7 591 aaPredicted RBP18.23■□□□□ 0.51
RABGGTA-219ENST00000560871 REPS2Q8NFH8 660 aa18.23■□□□□ 0.51
RABGGTA-219ENST00000560871 NCOA7Q8NI08 942 aa18.23■□□□□ 0.51
RABGGTA-219ENST00000560871 HOXC10Q9NYD6 342 aa18.23■□□□□ 0.51
RABGGTA-219ENST00000560871 GJB1P08034 283 aa18.22■□□□□ 0.51
RABGGTA-219ENST00000560871 SNHG28P0DPA3 235 aa18.22■□□□□ 0.51
RABGGTA-219ENST00000560871 ANTXR2P58335 489 aa18.22■□□□□ 0.51
RABGGTA-219ENST00000560871 COL9A3Q14050 684 aaPredicted RBP18.22■□□□□ 0.51
RABGGTA-219ENST00000560871 SEC23AQ15436 765 aa18.22■□□□□ 0.51
RABGGTA-219ENST00000560871 CCDC178Q5BJE1 867 aa18.22■□□□□ 0.51
RABGGTA-219ENST00000560871 RALYLQ86SE5 291 aaKnown RBP18.22■□□□□ 0.51
RABGGTA-219ENST00000560871 MB21D1Q8N884 522 aa18.22■□□□□ 0.51
RABGGTA-219ENST00000560871 DCAF4Q8WV16 495 aa18.22■□□□□ 0.51
RABGGTA-219ENST00000560871 SLF1Q9BQI6 1058 aa18.22■□□□□ 0.51
RABGGTA-219ENST00000560871 PORCNQ9H237 461 aa18.22■□□□□ 0.51
RABGGTA-219ENST00000560871 PDE4DIPQ5VU43 2346 aa18.21■□□□□ 0.51
RABGGTA-219ENST00000560871 INHAP05111 366 aa18.21■□□□□ 0.51
RABGGTA-219ENST00000560871 PDHBP11177 359 aa18.21■□□□□ 0.51
RABGGTA-219ENST00000560871 MCCP23508 829 aa18.21■□□□□ 0.51
RABGGTA-219ENST00000560871 SLC1A4P43007 532 aa18.21■□□□□ 0.51
RABGGTA-219ENST00000560871 GJA8P48165 433 aa18.21■□□□□ 0.51
RABGGTA-219ENST00000560871 PRPF38BQ5VTL8 546 aaKnown RBP18.21■□□□□ 0.51
RABGGTA-219ENST00000560871 SHISA4Q96DD7 197 aa18.21■□□□□ 0.51
RABGGTA-219ENST00000560871 UBAC1Q9BSL1 405 aa18.21■□□□□ 0.51
RABGGTA-219ENST00000560871 RNF208Q9H0X6 261 aa18.21■□□□□ 0.51
RABGGTA-219ENST00000560871 UNC93B1Q9H1C4 597 aa18.21■□□□□ 0.51
RABGGTA-219ENST00000560871 COL11A1P12107 1806 aaPredicted RBP18.21■□□□□ 0.51
RABGGTA-219ENST00000560871 VWA5AO00534 786 aa18.2■□□□□ 0.5
RABGGTA-219ENST00000560871 EPB41L2O43491 1005 aaKnown RBP18.2■□□□□ 0.5
RABGGTA-219ENST00000560871 PLA2G6O60733 806 aa18.2■□□□□ 0.5
RABGGTA-219ENST00000560871 MAPK4P31152 587 aa18.2■□□□□ 0.5
RABGGTA-219ENST00000560871 TMEM132BQ14DG7 1078 aa18.2■□□□□ 0.5
RABGGTA-219ENST00000560871 RASEFQ8IZ41 740 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms