RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 KANSL2Q9H9L4 492 aa24.56■■□□□ 1.52
TSPAN3-206ENST00000559373 SOX1O00570 391 aaPredicted RBP24.55■■□□□ 1.52
TSPAN3-206ENST00000559373 PRDM1O75626 825 aa24.55■■□□□ 1.52
TSPAN3-206ENST00000559373 HOXC6P09630 235 aa24.55■■□□□ 1.52
TSPAN3-206ENST00000559373 COL6A1P12109 1028 aa24.55■■□□□ 1.52
TSPAN3-206ENST00000559373 LRRC26Q2I0M4 334 aa24.55■■□□□ 1.52
TSPAN3-206ENST00000559373 MKNK2Q9HBH9 465 aa24.55■■□□□ 1.52
TSPAN3-206ENST00000559373 DDX20Q9UHI6 824 aaKnown RBP24.55■■□□□ 1.52
TSPAN3-206ENST00000559373 TDO2P48775 406 aa24.54■■□□□ 1.52
TSPAN3-206ENST00000559373 SBK1Q52WX2 424 aa24.54■■□□□ 1.52
TSPAN3-206ENST00000559373 SENP6Q9GZR1 1112 aaPredicted RBP24.54■■□□□ 1.52
TSPAN3-206ENST00000559373 GOPCQ9HD26 462 aa24.54■■□□□ 1.52
TSPAN3-206ENST00000559373 MYCNP04198 464 aaPredicted RBP24.53■■□□□ 1.52
TSPAN3-206ENST00000559373 MB21D1Q8N884 522 aa24.53■■□□□ 1.52
TSPAN3-206ENST00000559373 PI4K2BQ8TCG2 481 aa24.53■■□□□ 1.52
TSPAN3-206ENST00000559373 LRCH3Q96II8 777 aa24.53■■□□□ 1.52
TSPAN3-206ENST00000559373 STRNO43815 780 aa24.52■■□□□ 1.52
TSPAN3-206ENST00000559373 CYBAP13498 195 aa24.52■■□□□ 1.52
TSPAN3-206ENST00000559373 ATN1P54259 1190 aaPredicted RBP24.52■■□□□ 1.52
TSPAN3-206ENST00000559373 SHCBP1Q8NEM2 672 aa24.52■■□□□ 1.52
TSPAN3-206ENST00000559373 CHMP4CQ96CF2 233 aa24.52■■□□□ 1.52
TSPAN3-206ENST00000559373 CRBNQ96SW2 442 aa24.52■■□□□ 1.52
TSPAN3-206ENST00000559373 GDF15Q99988 308 aa24.52■■□□□ 1.52
TSPAN3-206ENST00000559373 MROH8Q9H579 483 aa24.52■■□□□ 1.52
TSPAN3-206ENST00000559373 IGHA2P01877 340 aa24.51■■□□□ 1.51
TSPAN3-206ENST00000559373 PGK2P07205 417 aa24.51■■□□□ 1.51
TSPAN3-206ENST00000559373 MAGEA10P43363 369 aaPredicted RBP24.51■■□□□ 1.51
TSPAN3-206ENST00000559373 SLC4A3P48751 1232 aa24.51■■□□□ 1.51
TSPAN3-206ENST00000559373 RRP1P56182 461 aaKnown RBP24.51■■□□□ 1.51
TSPAN3-206ENST00000559373 GJC2Q5T442 439 aaPredicted RBP24.51■■□□□ 1.51
TSPAN3-206ENST00000559373 FSD1Q9BTV5 496 aa24.51■■□□□ 1.51
TSPAN3-206ENST00000559373 CLIP2Q9UDT6 1046 aa24.51■■□□□ 1.51
TSPAN3-206ENST00000559373 IFNL3Q8IZI9 196 aa24.5■■□□□ 1.51
TSPAN3-206ENST00000559373 PPP1R9AQ9ULJ8 1098 aa24.5■■□□□ 1.51
TSPAN3-206ENST00000559373 ADAMTS5Q9UNA0 930 aa24.5■■□□□ 1.51
TSPAN3-206ENST00000559373 PATL2C9JE40 543 aaKnown RBP24.49■■□□□ 1.51
TSPAN3-206ENST00000559373 VWA5AO00534 786 aa24.49■■□□□ 1.51
TSPAN3-206ENST00000559373 ZFYP08048 801 aaPredicted RBP24.49■■□□□ 1.51
TSPAN3-206ENST00000559373 FCER1AP12319 257 aa24.49■■□□□ 1.51
TSPAN3-206ENST00000559373 OLFML2BQ68BL8 750 aa24.49■■□□□ 1.51
TSPAN3-206ENST00000559373 GIMAP6Q6P9H5 292 aa24.49■■□□□ 1.51
TSPAN3-206ENST00000559373 CCDC129Q6ZRS4 1044 aa24.49■■□□□ 1.51
TSPAN3-206ENST00000559373 MAML3Q96JK9 1138 aa24.49■■□□□ 1.51
TSPAN3-206ENST00000559373 YTHDC1Q96MU7 727 aaKnown RBP24.49■■□□□ 1.51
TSPAN3-206ENST00000559373 MMP19Q99542 508 aa24.49■■□□□ 1.51
TSPAN3-206ENST00000559373 TTC41PQ6P2S7 1318 aa24.49■■□□□ 1.51
TSPAN3-206ENST00000559373 F5H6K3 240 aa24.48■■□□□ 1.51
TSPAN3-206ENST00000559373 STAT3P40763 770 aa24.48■■□□□ 1.51
TSPAN3-206ENST00000559373 MDM2Q00987 491 aaPredicted RBP24.48■■□□□ 1.51
TSPAN3-206ENST00000559373 KLRC3Q07444 240 aa24.48■■□□□ 1.51
TSPAN3-206ENST00000559373 LTBP2Q14767 1821 aa24.48■■□□□ 1.51
TSPAN3-206ENST00000559373 ZNF444Q8N0Y2 327 aaPredicted RBP24.48■■□□□ 1.51
TSPAN3-206ENST00000559373 ROBO3Q96MS0 1386 aa24.48■■□□□ 1.51
TSPAN3-206ENST00000559373 LAMA2P24043 3122 aaKnown RBP24.48■■□□□ 1.51
TSPAN3-206ENST00000559373 ERC2O15083 957 aa24.47■■□□□ 1.51
TSPAN3-206ENST00000559373 NDUFB10O96000 172 aa24.47■■□□□ 1.51
TSPAN3-206ENST00000559373 MX1P20591 662 aa24.47■■□□□ 1.51
TSPAN3-206ENST00000559373 FAM47AQ5JRC9 791 aa24.47■■□□□ 1.51
TSPAN3-206ENST00000559373 ANKRD45Q5TZF3 282 aa24.47■■□□□ 1.51
TSPAN3-206ENST00000559373 LRRC47Q8N1G4 583 aaKnown RBP24.47■■□□□ 1.51
TSPAN3-206ENST00000559373 REPS2Q8NFH8 660 aa24.47■■□□□ 1.51
TSPAN3-206ENST00000559373 CEP95Q96GE4 821 aa24.47■■□□□ 1.51
TSPAN3-206ENST00000559373 ZNF214Q9UL59 606 aaPredicted RBP24.47■■□□□ 1.51
TSPAN3-206ENST00000559373 SLC25A27O95847 323 aa24.46■■□□□ 1.51
TSPAN3-206ENST00000559373 GNAT2P19087 354 aa24.46■■□□□ 1.51
TSPAN3-206ENST00000559373 RIOX2Q8IUF8 465 aa24.46■■□□□ 1.51
TSPAN3-206ENST00000559373 SLF1Q9BQI6 1058 aa24.46■■□□□ 1.51
TSPAN3-206ENST00000559373 INCENPQ9NQS7 918 aa24.46■■□□□ 1.51
TSPAN3-206ENST00000559373 SLC5A4Q9NY91 659 aa24.46■■□□□ 1.51
TSPAN3-206ENST00000559373 NYAP2Q9P242 653 aa24.46■■□□□ 1.51
TSPAN3-206ENST00000559373 RIPK3Q9Y572 518 aa24.46■■□□□ 1.51
TSPAN3-206ENST00000559373 MSCO60682 206 aa24.45■■□□□ 1.5
TSPAN3-206ENST00000559373 CPXCR1Q8N123 301 aa24.45■■□□□ 1.5
TSPAN3-206ENST00000559373 UBE2OQ9C0C9 1292 aaKnown RBP24.45■■□□□ 1.5
TSPAN3-206ENST00000559373 COL6A3P12111 3177 aa24.45■■□□□ 1.5
TSPAN3-206ENST00000559373 IGKV6D-41A0A0C4DH26 115 aa24.44■■□□□ 1.5
TSPAN3-206ENST00000559373 DNM1LO00429 736 aa24.44■■□□□ 1.5
TSPAN3-206ENST00000559373 TAL1P17542 331 aaPredicted RBP24.44■■□□□ 1.5
TSPAN3-206ENST00000559373 BMP8BP34820 402 aa24.44■■□□□ 1.5
TSPAN3-206ENST00000559373 ZMYM1Q5SVZ6 1142 aa24.44■■□□□ 1.5
TSPAN3-206ENST00000559373 SNRNP48Q6IEG0 339 aaKnown RBP24.44■■□□□ 1.5
TSPAN3-206ENST00000559373 ABRAQ8N0Z2 381 aa24.44■■□□□ 1.5
TSPAN3-206ENST00000559373 A0A1W2PPC1 479 aa24.43■■□□□ 1.5
TSPAN3-206ENST00000559373 SEPT4O43236 478 aa24.43■■□□□ 1.5
TSPAN3-206ENST00000559373 CTDSPL2Q05D32 466 aa24.43■■□□□ 1.5
TSPAN3-206ENST00000559373 KCTD2Q14681 263 aa24.43■■□□□ 1.5
TSPAN3-206ENST00000559373 FERMT2Q96AC1 680 aa24.43■■□□□ 1.5
TSPAN3-206ENST00000559373 KIFC2Q96AC6 838 aa24.43■■□□□ 1.5
TSPAN3-206ENST00000559373 LENG1Q96BZ8 264 aaPredicted RBP24.43■■□□□ 1.5
TSPAN3-206ENST00000559373 NAPBQ9H115 298 aa24.43■■□□□ 1.5
TSPAN3-206ENST00000559373 MTMR4Q9NYA4 1195 aa24.43■■□□□ 1.5
TSPAN3-206ENST00000559373 ISY1Q9ULR0 285 aaKnown RBP24.43■■□□□ 1.5
TSPAN3-206ENST00000559373 SALL3Q9BXA9 1300 aa24.42■■□□□ 1.5
TSPAN3-206ENST00000559373 RTP1P59025 263 aa24.42■■□□□ 1.5
TSPAN3-206ENST00000559373 PPARAQ07869 468 aa24.42■■□□□ 1.5
TSPAN3-206ENST00000559373 LRRFIP1Q32MZ4 808 aaKnown RBP24.42■■□□□ 1.5
TSPAN3-206ENST00000559373 NACAP1Q9BZK3 213 aa24.42■■□□□ 1.5
TSPAN3-206ENST00000559373 RAVER2Q9HCJ3 691 aaKnown RBP24.42■■□□□ 1.5
TSPAN3-206ENST00000559373 ATP11BQ9Y2G3 1177 aa24.42■■□□□ 1.5
TSPAN3-206ENST00000559373 FOXP2O15409 715 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms