RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 HMX1Q9NP08 348 aaPredicted RBP14.9□□□□□ -0.02
SMAD3-208ENST00000558827 HELLSQ9NRZ9 838 aa14.9□□□□□ -0.02
SMAD3-208ENST00000558827 IVNS1ABPQ9Y6Y0 642 aa14.9□□□□□ -0.02
SMAD3-208ENST00000558827 ROBO3Q96MS0 1386 aa14.89□□□□□ -0.03
SMAD3-208ENST00000558827 F5H6K3 240 aa14.89□□□□□ -0.03
SMAD3-208ENST00000558827 NMT2O60551 498 aa14.89□□□□□ -0.03
SMAD3-208ENST00000558827 NDUFB10O96000 172 aa14.89□□□□□ -0.03
SMAD3-208ENST00000558827 TSPY3P0CV98 308 aa14.89□□□□□ -0.03
SMAD3-208ENST00000558827 TSPY8P0CW00 308 aa14.89□□□□□ -0.03
SMAD3-208ENST00000558827 HAND2P61296 217 aa14.89□□□□□ -0.03
SMAD3-208ENST00000558827 PDE4BQ07343 736 aa14.89□□□□□ -0.03
SMAD3-208ENST00000558827 KLRC3Q07444 240 aa14.89□□□□□ -0.03
SMAD3-208ENST00000558827 TMEM132BQ14DG7 1078 aa14.89□□□□□ -0.03
SMAD3-208ENST00000558827 MCMDC2Q4G0Z9 681 aa14.89□□□□□ -0.03
SMAD3-208ENST00000558827 RRP12Q5JTH9 1297 aaKnown RBP14.89□□□□□ -0.03
SMAD3-208ENST00000558827 PAK6Q9NQU5 681 aaPredicted RBP14.89□□□□□ -0.03
SMAD3-208ENST00000558827 TOMM22Q9NS69 142 aa14.89□□□□□ -0.03
SMAD3-208ENST00000558827 NYAP2Q9P242 653 aa14.89□□□□□ -0.03
SMAD3-208ENST00000558827 IGKV6D-41A0A0C4DH26 115 aa14.88□□□□□ -0.03
SMAD3-208ENST00000558827 SLC15A5A6NIM6 579 aa14.88□□□□□ -0.03
SMAD3-208ENST00000558827 RANBP6O60518 1105 aaKnown RBP14.88□□□□□ -0.03
SMAD3-208ENST00000558827 SLC3A2P08195 630 aaKnown RBP14.88□□□□□ -0.03
SMAD3-208ENST00000558827 SDSP20132 328 aa14.88□□□□□ -0.03
SMAD3-208ENST00000558827 PDE4AP27815 886 aa14.88□□□□□ -0.03
SMAD3-208ENST00000558827 DPP9Q86TI2 863 aa14.88□□□□□ -0.03
SMAD3-208ENST00000558827 NEDD1Q8NHV4 660 aa14.88□□□□□ -0.03
SMAD3-208ENST00000558827 ZNF287Q9HBT7 754 aa14.88□□□□□ -0.03
SMAD3-208ENST00000558827 MTMR4Q9NYA4 1195 aa14.88□□□□□ -0.03
SMAD3-208ENST00000558827 RPTORQ8N122 1335 aa14.88□□□□□ -0.03
SMAD3-208ENST00000558827 MYH4Q9Y623 1939 aa14.88□□□□□ -0.03
SMAD3-208ENST00000558827 COBLO75128 1261 aa14.87□□□□□ -0.03
SMAD3-208ENST00000558827 FGAP02671 866 aa14.87□□□□□ -0.03
SMAD3-208ENST00000558827 XRCC5P13010 732 aaKnown RBP14.87□□□□□ -0.03
SMAD3-208ENST00000558827 ADORA2AP29274 412 aa14.87□□□□□ -0.03
SMAD3-208ENST00000558827 CNGA1P29973 690 aa14.87□□□□□ -0.03
SMAD3-208ENST00000558827 CYP2C19P33261 490 aa14.87□□□□□ -0.03
SMAD3-208ENST00000558827 CWC27Q6UX04 472 aaKnown RBP14.87□□□□□ -0.03
SMAD3-208ENST00000558827 RASGRP2Q7LDG7 609 aa14.87□□□□□ -0.03
SMAD3-208ENST00000558827 CPXCR1Q8N123 301 aa14.87□□□□□ -0.03
SMAD3-208ENST00000558827 KIFC2Q96AC6 838 aa14.87□□□□□ -0.03
SMAD3-208ENST00000558827 PAWRQ96IZ0 340 aaKnown RBP14.87□□□□□ -0.03
SMAD3-208ENST00000558827 APBA2Q99767 749 aa14.87□□□□□ -0.03
SMAD3-208ENST00000558827 PPP1R9AQ9ULJ8 1098 aa14.87□□□□□ -0.03
SMAD3-208ENST00000558827 COL11A1P12107 1806 aaPredicted RBP14.87□□□□□ -0.03
SMAD3-208ENST00000558827 GREB1LQ9C091 1923 aaPredicted RBP14.86□□□□□ -0.03
SMAD3-208ENST00000558827 TSPY2A6NKD2 308 aa14.86□□□□□ -0.03
SMAD3-208ENST00000558827 H0YGN5 161 aa14.86□□□□□ -0.03
SMAD3-208ENST00000558827 VWA5AO00534 786 aa14.86□□□□□ -0.03
SMAD3-208ENST00000558827 TTLL1O95922 423 aa14.86□□□□□ -0.03
SMAD3-208ENST00000558827 HSPD1P10809 573 aaKnown RBP14.86□□□□□ -0.03
SMAD3-208ENST00000558827 GRB14Q14449 540 aa14.86□□□□□ -0.03
SMAD3-208ENST00000558827 PRAMEF19Q5SWL8 479 aa14.86□□□□□ -0.03
SMAD3-208ENST00000558827 ANO1Q5XXA6 986 aa14.86□□□□□ -0.03
SMAD3-208ENST00000558827 SLFN13Q68D06 897 aa14.86□□□□□ -0.03
SMAD3-208ENST00000558827 SLF1Q9BQI6 1058 aa14.86□□□□□ -0.03
SMAD3-208ENST00000558827 PCDH10Q9P2E7 1040 aa14.86□□□□□ -0.03
SMAD3-208ENST00000558827 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.86□□□□□ -0.03
SMAD3-208ENST00000558827 PGK2P07205 417 aa14.85□□□□□ -0.03
SMAD3-208ENST00000558827 MCCP23508 829 aa14.85□□□□□ -0.03
SMAD3-208ENST00000558827 STAT3P40763 770 aa14.85□□□□□ -0.03
SMAD3-208ENST00000558827 SNAP25P60880 206 aa14.85□□□□□ -0.03
SMAD3-208ENST00000558827 MAP3K21Q5TCX8 1036 aa14.85□□□□□ -0.03
SMAD3-208ENST00000558827 MFSD14CQ5VZR4 134 aa14.85□□□□□ -0.03
SMAD3-208ENST00000558827 UBE2Q1Q7Z7E8 422 aa14.85□□□□□ -0.03
SMAD3-208ENST00000558827 MB21D1Q8N884 522 aa14.85□□□□□ -0.03
SMAD3-208ENST00000558827 CRISPLD2Q9H0B8 497 aa14.85□□□□□ -0.03
SMAD3-208ENST00000558827 IL17RBQ9NRM6 502 aa14.85□□□□□ -0.03
SMAD3-208ENST00000558827 DIAPH3Q9NSV4 1193 aa14.85□□□□□ -0.03
SMAD3-208ENST00000558827 STX8Q9UNK0 236 aa14.85□□□□□ -0.03
SMAD3-208ENST00000558827 CCDC171Q6TFL3 1326 aa14.85□□□□□ -0.03
SMAD3-208ENST00000558827 PARP14Q460N5 1801 aa14.85□□□□□ -0.03
SMAD3-208ENST00000558827 ZNFX1Q9P2E3 1918 aaKnown RBP14.84□□□□□ -0.03
SMAD3-208ENST00000558827 ALX1Q15699 326 aa14.84□□□□□ -0.03
SMAD3-208ENST00000558827 SHCBP1Q8NEM2 672 aa14.84□□□□□ -0.03
SMAD3-208ENST00000558827 TRPV1Q8NER1 839 aa14.84□□□□□ -0.03
SMAD3-208ENST00000558827 MKL1Q969V6 931 aa14.84□□□□□ -0.03
SMAD3-208ENST00000558827 MMP19Q99542 508 aa14.84□□□□□ -0.03
SMAD3-208ENST00000558827 OSBPL3Q9H4L5 887 aa14.84□□□□□ -0.03
SMAD3-208ENST00000558827 RAVER2Q9HCJ3 691 aaKnown RBP14.84□□□□□ -0.03
SMAD3-208ENST00000558827 ADAMTS5Q9UNA0 930 aa14.84□□□□□ -0.03
SMAD3-208ENST00000558827 RIPK3Q9Y572 518 aa14.84□□□□□ -0.03
SMAD3-208ENST00000558827 CTDP1Q9Y5B0 961 aaPredicted RBP14.84□□□□□ -0.03
SMAD3-208ENST00000558827 TMEM232C9JQI7 657 aa14.83□□□□□ -0.04
SMAD3-208ENST00000558827 MYCNP04198 464 aaPredicted RBP14.83□□□□□ -0.04
SMAD3-208ENST00000558827 FCER1AP12319 257 aa14.83□□□□□ -0.04
SMAD3-208ENST00000558827 BMP3P12645 472 aa14.83□□□□□ -0.04
SMAD3-208ENST00000558827 IKQ13123 557 aaPredicted RBP14.83□□□□□ -0.04
SMAD3-208ENST00000558827 SNRNP48Q6IEG0 339 aaKnown RBP14.83□□□□□ -0.04
SMAD3-208ENST00000558827 KCTD1Q719H9 257 aa14.83□□□□□ -0.04
SMAD3-208ENST00000558827 TRMT44Q8IYL2 757 aaKnown RBP14.83□□□□□ -0.04
SMAD3-208ENST00000558827 REPS2Q8NFH8 660 aa14.83□□□□□ -0.04
SMAD3-208ENST00000558827 MROH8Q9H579 483 aa14.83□□□□□ -0.04
SMAD3-208ENST00000558827 ZNF214Q9UL59 606 aaPredicted RBP14.83□□□□□ -0.04
SMAD3-208ENST00000558827 STRNO43815 780 aa14.82□□□□□ -0.04
SMAD3-208ENST00000558827 ZBED4O75132 1171 aa14.82□□□□□ -0.04
SMAD3-208ENST00000558827 TAL1P17542 331 aaPredicted RBP14.82□□□□□ -0.04
SMAD3-208ENST00000558827 MNX1P50219 401 aaPredicted RBP14.82□□□□□ -0.04
SMAD3-208ENST00000558827 LHX8Q68G74 356 aa14.82□□□□□ -0.04
SMAD3-208ENST00000558827 NECAB2Q7Z6G3 386 aa14.82□□□□□ -0.04
SMAD3-208ENST00000558827 RIOX2Q8IUF8 465 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms