RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 HOXC10Q9NYD6 342 aa18.68■□□□□ 0.58
RABGGTA-206ENST00000558649 BTBD7Q9P203 1132 aa18.68■□□□□ 0.58
RABGGTA-206ENST00000558649 HPS5Q9UPZ3 1129 aa18.68■□□□□ 0.58
RABGGTA-206ENST00000558649 RABGAP1Q9Y3P9 1069 aa18.68■□□□□ 0.58
RABGGTA-206ENST00000558649 PTCH2Q9Y6C5 1203 aa18.68■□□□□ 0.58
RABGGTA-206ENST00000558649 MYPNQ86TC9 1320 aa18.68■□□□□ 0.58
RABGGTA-206ENST00000558649 DSG3P32926 999 aa18.67■□□□□ 0.58
RABGGTA-206ENST00000558649 PRKCZQ05513 592 aa18.67■□□□□ 0.58
RABGGTA-206ENST00000558649 PLS1Q14651 629 aa18.67■□□□□ 0.58
RABGGTA-206ENST00000558649 Q3C1V9 767 aa18.67■□□□□ 0.58
RABGGTA-206ENST00000558649 WDR78Q5VTH9 848 aa18.67■□□□□ 0.58
RABGGTA-206ENST00000558649 RALYLQ86SE5 291 aaKnown RBP18.67■□□□□ 0.58
RABGGTA-206ENST00000558649 IQCA1Q86XH1 822 aa18.67■□□□□ 0.58
RABGGTA-206ENST00000558649 TMEM47Q9BQJ4 181 aa18.67■□□□□ 0.58
RABGGTA-206ENST00000558649 TCP11L1Q9NUJ3 509 aa18.67■□□□□ 0.58
RABGGTA-206ENST00000558649 SYNPO2Q9UMS6 1093 aa18.67■□□□□ 0.58
RABGGTA-206ENST00000558649 E7EWF7 191 aa18.66■□□□□ 0.58
RABGGTA-206ENST00000558649 GNRH1P01148 92 aa18.66■□□□□ 0.58
RABGGTA-206ENST00000558649 TOP1P11387 765 aaKnown RBP18.66■□□□□ 0.58
RABGGTA-206ENST00000558649 BMP3P12645 472 aa18.66■□□□□ 0.58
RABGGTA-206ENST00000558649 MCCP23508 829 aa18.66■□□□□ 0.58
RABGGTA-206ENST00000558649 HOXD10P28358 340 aa18.66■□□□□ 0.58
RABGGTA-206ENST00000558649 SLC1A4P43007 532 aa18.66■□□□□ 0.58
RABGGTA-206ENST00000558649 IKQ13123 557 aaPredicted RBP18.66■□□□□ 0.58
RABGGTA-206ENST00000558649 CCDC96Q2M329 555 aa18.66■□□□□ 0.58
RABGGTA-206ENST00000558649 LBX2Q6XYB7 198 aa18.66■□□□□ 0.58
RABGGTA-206ENST00000558649 COA7Q96BR5 231 aa18.66■□□□□ 0.58
RABGGTA-206ENST00000558649 ZSCAN10Q96SZ4 725 aaPredicted RBP18.66■□□□□ 0.58
RABGGTA-206ENST00000558649 SLF1Q9BQI6 1058 aa18.66■□□□□ 0.58
RABGGTA-206ENST00000558649 UBAC1Q9BSL1 405 aa18.66■□□□□ 0.58
RABGGTA-206ENST00000558649 PORCNQ9H237 461 aa18.66■□□□□ 0.58
RABGGTA-206ENST00000558649 ZSWIM5Q9P217 1185 aa18.66■□□□□ 0.58
RABGGTA-206ENST00000558649 SRRDQ9UH36 339 aa18.66■□□□□ 0.58
RABGGTA-206ENST00000558649 GABRQQ9UN88 632 aa18.66■□□□□ 0.58
RABGGTA-206ENST00000558649 CCDC85CA6NKD9 419 aa18.65■□□□□ 0.58
RABGGTA-206ENST00000558649 CCNA1P78396 465 aa18.65■□□□□ 0.58
RABGGTA-206ENST00000558649 RCSD1Q6JBY9 416 aa18.65■□□□□ 0.58
RABGGTA-206ENST00000558649 STOX1Q6ZVD7 989 aa18.65■□□□□ 0.58
RABGGTA-206ENST00000558649 KCTD1Q719H9 257 aa18.65■□□□□ 0.58
RABGGTA-206ENST00000558649 CYB5R4Q7L1T6 521 aa18.65■□□□□ 0.58
RABGGTA-206ENST00000558649 RAET1EQ8TD07 263 aa18.65■□□□□ 0.58
RABGGTA-206ENST00000558649 KIFC2Q96AC6 838 aa18.65■□□□□ 0.58
RABGGTA-206ENST00000558649 PPP1R9AQ9ULJ8 1098 aa18.65■□□□□ 0.58
RABGGTA-206ENST00000558649 TNKSO95271 1327 aa18.65■□□□□ 0.58
RABGGTA-206ENST00000558649 TMEM232C9JQI7 657 aa18.64■□□□□ 0.57
RABGGTA-206ENST00000558649 SLC27A2O14975 620 aa18.64■□□□□ 0.57
RABGGTA-206ENST00000558649 CREB3L3Q68CJ9 461 aa18.64■□□□□ 0.57
RABGGTA-206ENST00000558649 NCOA7Q8NI08 942 aa18.64■□□□□ 0.57
RABGGTA-206ENST00000558649 GMCL1Q96IK5 515 aa18.64■□□□□ 0.57
RABGGTA-206ENST00000558649 CTDP1Q9Y5B0 961 aaPredicted RBP18.64■□□□□ 0.57
RABGGTA-206ENST00000558649 PLXNB2O15031 1838 aa18.64■□□□□ 0.57
RABGGTA-206ENST00000558649 VWA5AO00534 786 aa18.63■□□□□ 0.57
RABGGTA-206ENST00000558649 MAPK4P31152 587 aa18.63■□□□□ 0.57
RABGGTA-206ENST00000558649 NOVP48745 357 aa18.63■□□□□ 0.57
RABGGTA-206ENST00000558649 NT5C2P49902 561 aa18.63■□□□□ 0.57
RABGGTA-206ENST00000558649 SLC9C1Q4G0N8 1177 aa18.63■□□□□ 0.57
RABGGTA-206ENST00000558649 CCDC178Q5BJE1 867 aa18.63■□□□□ 0.57
RABGGTA-206ENST00000558649 CHST3Q7LGC8 479 aa18.63■□□□□ 0.57
RABGGTA-206ENST00000558649 MB21D1Q8N884 522 aa18.63■□□□□ 0.57
RABGGTA-206ENST00000558649 ENAHQ8N8S7 591 aaPredicted RBP18.63■□□□□ 0.57
RABGGTA-206ENST00000558649 TTC14Q96N46 770 aa18.63■□□□□ 0.57
RABGGTA-206ENST00000558649 SPATC1LQ9H0A9 340 aa18.63■□□□□ 0.57
RABGGTA-206ENST00000558649 KAT14Q9H8E8 782 aa18.63■□□□□ 0.57
RABGGTA-206ENST00000558649 FEM1BQ9UK73 627 aa18.63■□□□□ 0.57
RABGGTA-206ENST00000558649 FRMPD2Q68DX3 1309 aaPredicted RBP18.63■□□□□ 0.57
RABGGTA-206ENST00000558649 SLC4A3P48751 1232 aa18.62■□□□□ 0.57
RABGGTA-206ENST00000558649 FLT3LGP49771 235 aa18.62■□□□□ 0.57
RABGGTA-206ENST00000558649 STAT2P52630 851 aa18.62■□□□□ 0.57
RABGGTA-206ENST00000558649 PRMT2P55345 433 aa18.62■□□□□ 0.57
RABGGTA-206ENST00000558649 TMEM132BQ14DG7 1078 aa18.62■□□□□ 0.57
RABGGTA-206ENST00000558649 NECTIN1Q15223 517 aa18.62■□□□□ 0.57
RABGGTA-206ENST00000558649 GPR142Q7Z601 462 aa18.62■□□□□ 0.57
RABGGTA-206ENST00000558649 PRPF38AQ8NAV1 312 aaKnown RBP18.62■□□□□ 0.57
RABGGTA-206ENST00000558649 SH3TC2Q8TF17 1288 aa18.62■□□□□ 0.57
RABGGTA-206ENST00000558649 DCAF4Q8WV16 495 aa18.62■□□□□ 0.57
RABGGTA-206ENST00000558649 MOV10L1Q9BXT6 1211 aaKnown RBP18.62■□□□□ 0.57
RABGGTA-206ENST00000558649 DOCK3Q8IZD9 2030 aa18.61■□□□□ 0.57
RABGGTA-206ENST00000558649 MYCP01106 439 aaPredicted RBP18.61■□□□□ 0.57
RABGGTA-206ENST00000558649 IFIT1BQ5T764 474 aaKnown RBP18.61■□□□□ 0.57
RABGGTA-206ENST00000558649 RNF20Q5VTR2 975 aa18.61■□□□□ 0.57
RABGGTA-206ENST00000558649 PLEKHH3Q7Z736 793 aa18.61■□□□□ 0.57
RABGGTA-206ENST00000558649 NCAPG2Q86XI2 1143 aa18.61■□□□□ 0.57
RABGGTA-206ENST00000558649 DGKHQ86XP1 1220 aa18.61■□□□□ 0.57
RABGGTA-206ENST00000558649 PNMA1Q8ND90 353 aa18.61■□□□□ 0.57
RABGGTA-206ENST00000558649 GPCPD1Q9NPB8 672 aa18.61■□□□□ 0.57
RABGGTA-206ENST00000558649 ERICH2A1L162 156 aa18.6■□□□□ 0.57
RABGGTA-206ENST00000558649 IFIT3O14879 490 aaKnown RBP18.6■□□□□ 0.57
RABGGTA-206ENST00000558649 ZBED4O75132 1171 aa18.6■□□□□ 0.57
RABGGTA-206ENST00000558649 PDHBP11177 359 aa18.6■□□□□ 0.57
RABGGTA-206ENST00000558649 CPXCR1Q8N123 301 aa18.6■□□□□ 0.57
RABGGTA-206ENST00000558649 BIN2Q9UBW5 565 aaPredicted RBP18.6■□□□□ 0.57
RABGGTA-206ENST00000558649 ADAMTS5Q9UNA0 930 aa18.6■□□□□ 0.57
RABGGTA-206ENST00000558649 IVNS1ABPQ9Y6Y0 642 aa18.6■□□□□ 0.57
RABGGTA-206ENST00000558649 ELNP15502 786 aa18.59■□□□□ 0.57
RABGGTA-206ENST00000558649 ERCC3P19447 782 aa18.59■□□□□ 0.57
RABGGTA-206ENST00000558649 SLC16A2P36021 539 aa18.59■□□□□ 0.57
RABGGTA-206ENST00000558649 SNAP25P60880 206 aa18.59■□□□□ 0.57
RABGGTA-206ENST00000558649 TTBK2Q6IQ55 1244 aa18.59■□□□□ 0.57
RABGGTA-206ENST00000558649 FAM160B2Q86V87 743 aa18.59■□□□□ 0.57
RABGGTA-206ENST00000558649 MB21D2Q8IYB1 491 aaPredicted RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms