RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 SIAH1Q8IUQ4 282 aa10.57□□□□□ -0.72
SPG11-207ENST00000558138 KIFC2Q96AC6 838 aa10.57□□□□□ -0.72
SPG11-207ENST00000558138 ATG4CQ96DT6 458 aa10.57□□□□□ -0.72
SPG11-207ENST00000558138 SLF1Q9BQI6 1058 aa10.57□□□□□ -0.72
SPG11-207ENST00000558138 KAT14Q9H8E8 782 aa10.57□□□□□ -0.72
SPG11-207ENST00000558138 RABGAP1Q9Y3P9 1069 aa10.57□□□□□ -0.72
SPG11-207ENST00000558138 PTCH2Q9Y6C5 1203 aa10.57□□□□□ -0.72
SPG11-207ENST00000558138 GREB1LQ9C091 1923 aaPredicted RBP10.56□□□□□ -0.72
SPG11-207ENST00000558138 MGAMO43451 1857 aa10.56□□□□□ -0.72
SPG11-207ENST00000558138 TMEM232C9JQI7 657 aa10.56□□□□□ -0.72
SPG11-207ENST00000558138 ZBED4O75132 1171 aa10.56□□□□□ -0.72
SPG11-207ENST00000558138 TOP1P11387 765 aaKnown RBP10.56□□□□□ -0.72
SPG11-207ENST00000558138 BMP3P12645 472 aa10.56□□□□□ -0.72
SPG11-207ENST00000558138 MCCP23508 829 aa10.56□□□□□ -0.72
SPG11-207ENST00000558138 MAPK4P31152 587 aa10.56□□□□□ -0.72
SPG11-207ENST00000558138 DSG3P32926 999 aa10.56□□□□□ -0.72
SPG11-207ENST00000558138 NT5C2P49902 561 aa10.56□□□□□ -0.72
SPG11-207ENST00000558138 STAT2P52630 851 aa10.56□□□□□ -0.72
SPG11-207ENST00000558138 SART3Q15020 963 aaKnown RBP10.56□□□□□ -0.72
SPG11-207ENST00000558138 RNF20Q5VTR2 975 aa10.56□□□□□ -0.72
SPG11-207ENST00000558138 NCAPG2Q86XI2 1143 aa10.56□□□□□ -0.72
SPG11-207ENST00000558138 MB21D1Q8N884 522 aa10.56□□□□□ -0.72
SPG11-207ENST00000558138 GMCL1P1Q8NEA9 526 aa10.56□□□□□ -0.72
SPG11-207ENST00000558138 NCOA7Q8NI08 942 aa10.56□□□□□ -0.72
SPG11-207ENST00000558138 NBPF3Q9H094 633 aa10.56□□□□□ -0.72
SPG11-207ENST00000558138 TXNRD2Q9NNW7 524 aa10.56□□□□□ -0.72
SPG11-207ENST00000558138 IL17RBQ9NRM6 502 aa10.56□□□□□ -0.72
SPG11-207ENST00000558138 FBXO28Q9NVF7 368 aa10.56□□□□□ -0.72
SPG11-207ENST00000558138 RBPJLQ9UBG7 517 aa10.56□□□□□ -0.72
SPG11-207ENST00000558138 MORF4L1Q9UBU8 362 aa10.56□□□□□ -0.72
SPG11-207ENST00000558138 SRRDQ9UH36 339 aa10.56□□□□□ -0.72
SPG11-207ENST00000558138 FEM1BQ9UK73 627 aa10.56□□□□□ -0.72
SPG11-207ENST00000558138 SYNPO2Q9UMS6 1093 aa10.56□□□□□ -0.72
SPG11-207ENST00000558138 TACC3Q9Y6A5 838 aa10.56□□□□□ -0.72
SPG11-207ENST00000558138 CYP21A2P08686 494 aa10.55□□□□□ -0.72
SPG11-207ENST00000558138 FGRP09769 529 aa10.55□□□□□ -0.72
SPG11-207ENST00000558138 CTGFP29279 349 aa10.55□□□□□ -0.72
SPG11-207ENST00000558138 FLT3LGP49771 235 aa10.55□□□□□ -0.72
SPG11-207ENST00000558138 IFIT1BQ5T764 474 aaKnown RBP10.55□□□□□ -0.72
SPG11-207ENST00000558138 KCTD1Q719H9 257 aa10.55□□□□□ -0.72
SPG11-207ENST00000558138 PLEKHH3Q7Z736 793 aa10.55□□□□□ -0.72
SPG11-207ENST00000558138 SH3TC2Q8TF17 1288 aa10.55□□□□□ -0.72
SPG11-207ENST00000558138 SOCS4Q8WXH5 440 aa10.55□□□□□ -0.72
SPG11-207ENST00000558138 MKL1Q969V6 931 aa10.55□□□□□ -0.72
SPG11-207ENST00000558138 ZSCAN10Q96SZ4 725 aaPredicted RBP10.55□□□□□ -0.72
SPG11-207ENST00000558138 NUDT12Q9BQG2 462 aa10.55□□□□□ -0.72
SPG11-207ENST00000558138 TMEM47Q9BQJ4 181 aa10.55□□□□□ -0.72
SPG11-207ENST00000558138 TCP11L1Q9NUJ3 509 aa10.55□□□□□ -0.72
SPG11-207ENST00000558138 BTBD7Q9P203 1132 aa10.55□□□□□ -0.72
SPG11-207ENST00000558138 PPP1R9AQ9ULJ8 1098 aa10.55□□□□□ -0.72
SPG11-207ENST00000558138 GABRQQ9UN88 632 aa10.55□□□□□ -0.72
SPG11-207ENST00000558138 TNKSO95271 1327 aa10.55□□□□□ -0.72
SPG11-207ENST00000558138 FRMPD2Q68DX3 1309 aaPredicted RBP10.55□□□□□ -0.72
SPG11-207ENST00000558138 E7EWF7 191 aa10.54□□□□□ -0.72
SPG11-207ENST00000558138 IFIT3O14879 490 aaKnown RBP10.54□□□□□ -0.72
SPG11-207ENST00000558138 DHX16O60231 1041 aaKnown RBP10.54□□□□□ -0.72
SPG11-207ENST00000558138 ADCY3O60266 1144 aa10.54□□□□□ -0.72
SPG11-207ENST00000558138 ZKSCAN1P17029 563 aaPredicted RBP10.54□□□□□ -0.72
SPG11-207ENST00000558138 CYP2B6P20813 491 aa10.54□□□□□ -0.72
SPG11-207ENST00000558138 GRK4P32298 578 aa10.54□□□□□ -0.72
SPG11-207ENST00000558138 SOX10P56693 466 aa10.54□□□□□ -0.72
SPG11-207ENST00000558138 UBXN2AP68543 259 aa10.54□□□□□ -0.72
SPG11-207ENST00000558138 CAP1Q01518 475 aa10.54□□□□□ -0.72
SPG11-207ENST00000558138 Q3C1V9 767 aa10.54□□□□□ -0.72
SPG11-207ENST00000558138 IFFO2Q5TF58 517 aa10.54□□□□□ -0.72
SPG11-207ENST00000558138 LBX2Q6XYB7 198 aa10.54□□□□□ -0.72
SPG11-207ENST00000558138 GPR142Q7Z601 462 aa10.54□□□□□ -0.72
SPG11-207ENST00000558138 FAM160B2Q86V87 743 aa10.54□□□□□ -0.72
SPG11-207ENST00000558138 CPXCR1Q8N123 301 aa10.54□□□□□ -0.72
SPG11-207ENST00000558138 PRPF38AQ8NAV1 312 aaKnown RBP10.54□□□□□ -0.72
SPG11-207ENST00000558138 CHURC1Q8WUH1 139 aa10.54□□□□□ -0.72
SPG11-207ENST00000558138 DCAF4Q8WV16 495 aa10.54□□□□□ -0.72
SPG11-207ENST00000558138 MAP4K1Q92918 833 aa10.54□□□□□ -0.72
SPG11-207ENST00000558138 TMEM106CQ9BVX2 250 aa10.54□□□□□ -0.72
SPG11-207ENST00000558138 LSG1Q9H089 658 aaKnown RBP10.54□□□□□ -0.72
SPG11-207ENST00000558138 SPATC1LQ9H0A9 340 aa10.54□□□□□ -0.72
SPG11-207ENST00000558138 PORCNQ9H237 461 aa10.54□□□□□ -0.72
SPG11-207ENST00000558138 GPCPD1Q9NPB8 672 aa10.54□□□□□ -0.72
SPG11-207ENST00000558138 VWA5AO00534 786 aa10.53□□□□□ -0.72
SPG11-207ENST00000558138 CNMDO75829 334 aa10.53□□□□□ -0.72
SPG11-207ENST00000558138 REC8O95072 547 aa10.53□□□□□ -0.72
SPG11-207ENST00000558138 ERCC3P19447 782 aa10.53□□□□□ -0.72
SPG11-207ENST00000558138 RGS2P41220 211 aa10.53□□□□□ -0.72
SPG11-207ENST00000558138 WTAPQ15007 396 aa10.53□□□□□ -0.72
SPG11-207ENST00000558138 CREB3L3Q68CJ9 461 aa10.53□□□□□ -0.72
SPG11-207ENST00000558138 SNRNP48Q6IEG0 339 aaKnown RBP10.53□□□□□ -0.72
SPG11-207ENST00000558138 RCSD1Q6JBY9 416 aa10.53□□□□□ -0.72
SPG11-207ENST00000558138 CCDC174Q6PII3 467 aa10.53□□□□□ -0.72
SPG11-207ENST00000558138 NFXL1Q6ZNB6 911 aa10.53□□□□□ -0.72
SPG11-207ENST00000558138 DPP9Q86TI2 863 aa10.53□□□□□ -0.72
SPG11-207ENST00000558138 DGKHQ86XP1 1220 aa10.53□□□□□ -0.72
SPG11-207ENST00000558138 SLAIN1Q8ND83 568 aa10.53□□□□□ -0.72
SPG11-207ENST00000558138 PNMA1Q8ND90 353 aa10.53□□□□□ -0.72
SPG11-207ENST00000558138 GMCL1Q96IK5 515 aa10.53□□□□□ -0.72
SPG11-207ENST00000558138 TTC14Q96N46 770 aa10.53□□□□□ -0.72
SPG11-207ENST00000558138 MOV10L1Q9BXT6 1211 aaKnown RBP10.53□□□□□ -0.72
SPG11-207ENST00000558138 ZSWIM5Q9P217 1185 aa10.53□□□□□ -0.72
SPG11-207ENST00000558138 SLC27A2O14975 620 aa10.52□□□□□ -0.73
SPG11-207ENST00000558138 SLC25A27O95847 323 aa10.52□□□□□ -0.73
SPG11-207ENST00000558138 ELNP15502 786 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms