RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 PRO3102Q9H379 93 aa16.94■□□□□ 0.3
SNX6-210ENST00000557341 ZNF287Q9HBT7 754 aa16.94■□□□□ 0.3
SNX6-210ENST00000557341 SMCHD1A6NHR9 2005 aa16.94■□□□□ 0.3
SNX6-210ENST00000557341 PFASO15067 1338 aa16.94■□□□□ 0.3
SNX6-210ENST00000557341 LTBP2Q14767 1821 aa16.93■□□□□ 0.3
SNX6-210ENST00000557341 MCM3APO60318 1980 aa16.93■□□□□ 0.3
SNX6-210ENST00000557341 APPP05067 770 aa16.93■□□□□ 0.3
SNX6-210ENST00000557341 STK11IPQ8N1F8 1099 aa16.93■□□□□ 0.3
SNX6-210ENST00000557341 OTUD7AQ8TE49 926 aaPredicted RBP16.93■□□□□ 0.3
SNX6-210ENST00000557341 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.93■□□□□ 0.3
SNX6-210ENST00000557341 SLC5A4Q9NY91 659 aa16.93■□□□□ 0.3
SNX6-210ENST00000557341 ZBTB47Q9UFB7 747 aaPredicted RBP16.93■□□□□ 0.3
SNX6-210ENST00000557341 LAMA4Q16363 1823 aa16.92■□□□□ 0.3
SNX6-210ENST00000557341 SLC25A27O95847 323 aa16.92■□□□□ 0.3
SNX6-210ENST00000557341 CNGA1P29973 690 aa16.92■□□□□ 0.3
SNX6-210ENST00000557341 CYP2C19P33261 490 aa16.92■□□□□ 0.3
SNX6-210ENST00000557341 TMEM132BQ14DG7 1078 aa16.92■□□□□ 0.3
SNX6-210ENST00000557341 FAM83BQ5T0W9 1011 aa16.92■□□□□ 0.3
SNX6-210ENST00000557341 OLFML2BQ68BL8 750 aa16.92■□□□□ 0.3
SNX6-210ENST00000557341 ABRAQ8N0Z2 381 aa16.92■□□□□ 0.3
SNX6-210ENST00000557341 CRBNQ96SW2 442 aa16.92■□□□□ 0.3
SNX6-210ENST00000557341 NACAP1Q9BZK3 213 aa16.92■□□□□ 0.3
SNX6-210ENST00000557341 FBXO28Q9NVF7 368 aa16.92■□□□□ 0.3
SNX6-210ENST00000557341 DDX20Q9UHI6 824 aaKnown RBP16.92■□□□□ 0.3
SNX6-210ENST00000557341 PPP1R9AQ9ULJ8 1098 aa16.92■□□□□ 0.3
SNX6-210ENST00000557341 ADAMTS5Q9UNA0 930 aa16.92■□□□□ 0.3
SNX6-210ENST00000557341 PLIN4Q96Q06 1357 aa16.91■□□□□ 0.3
SNX6-210ENST00000557341 A0A1W2PPC1 479 aa16.91■□□□□ 0.3
SNX6-210ENST00000557341 PATL2C9JE40 543 aaKnown RBP16.91■□□□□ 0.3
SNX6-210ENST00000557341 COL6A1P12109 1028 aa16.91■□□□□ 0.3
SNX6-210ENST00000557341 FCER1AP12319 257 aa16.91■□□□□ 0.3
SNX6-210ENST00000557341 CYBAP13498 195 aa16.91■□□□□ 0.3
SNX6-210ENST00000557341 IFNL3Q8IZI9 196 aa16.91■□□□□ 0.3
SNX6-210ENST00000557341 NYAP2Q9P242 653 aa16.91■□□□□ 0.3
SNX6-210ENST00000557341 SALL3Q9BXA9 1300 aa16.91■□□□□ 0.3
SNX6-210ENST00000557341 VWA5AO00534 786 aa16.9■□□□□ 0.3
SNX6-210ENST00000557341 IGHA2P01877 340 aa16.9■□□□□ 0.3
SNX6-210ENST00000557341 COPB2P35606 906 aa16.9■□□□□ 0.3
SNX6-210ENST00000557341 SEC62Q99442 399 aaKnown RBP16.9■□□□□ 0.3
SNX6-210ENST00000557341 NAPBQ9H115 298 aa16.9■□□□□ 0.3
SNX6-210ENST00000557341 ZNF214Q9UL59 606 aaPredicted RBP16.9■□□□□ 0.3
SNX6-210ENST00000557341 ZMYND8Q9ULU4 1186 aaPredicted RBP16.9■□□□□ 0.3
SNX6-210ENST00000557341 COBLO75128 1261 aa16.89■□□□□ 0.29
SNX6-210ENST00000557341 PRDM1O75626 825 aa16.89■□□□□ 0.29
SNX6-210ENST00000557341 ZMYM1Q5SVZ6 1142 aa16.89■□□□□ 0.29
SNX6-210ENST00000557341 RIOX2Q8IUF8 465 aa16.89■□□□□ 0.29
SNX6-210ENST00000557341 ZNF444Q8N0Y2 327 aaPredicted RBP16.89■□□□□ 0.29
SNX6-210ENST00000557341 TRPV1Q8NER1 839 aa16.89■□□□□ 0.29
SNX6-210ENST00000557341 MMP19Q99542 508 aa16.89■□□□□ 0.29
SNX6-210ENST00000557341 SLF1Q9BQI6 1058 aa16.89■□□□□ 0.29
SNX6-210ENST00000557341 IGKV6D-41A0A0C4DH26 115 aa16.88■□□□□ 0.29
SNX6-210ENST00000557341 F5H6K3 240 aa16.88■□□□□ 0.29
SNX6-210ENST00000557341 NDUFB10O96000 172 aa16.88■□□□□ 0.29
SNX6-210ENST00000557341 SLC3A2P08195 630 aaKnown RBP16.88■□□□□ 0.29
SNX6-210ENST00000557341 PDE4BQ07343 736 aa16.88■□□□□ 0.29
SNX6-210ENST00000557341 KLRC3Q07444 240 aa16.88■□□□□ 0.29
SNX6-210ENST00000557341 HDAC1Q13547 482 aaPredicted RBP16.88■□□□□ 0.29
SNX6-210ENST00000557341 ANKRD45Q5TZF3 282 aa16.88■□□□□ 0.29
SNX6-210ENST00000557341 CEP95Q96GE4 821 aa16.88■□□□□ 0.29
SNX6-210ENST00000557341 MAML3Q96JK9 1138 aa16.88■□□□□ 0.29
SNX6-210ENST00000557341 NUP88Q99567 741 aaPredicted RBP16.88■□□□□ 0.29
SNX6-210ENST00000557341 STAP2Q9UGK3 403 aa16.88■□□□□ 0.29
SNX6-210ENST00000557341 SYNPO2Q9UMS6 1093 aa16.88■□□□□ 0.29
SNX6-210ENST00000557341 LRRC37A2A6NM11 1700 aa16.87■□□□□ 0.29
SNX6-210ENST00000557341 DNM1LO00429 736 aa16.87■□□□□ 0.29
SNX6-210ENST00000557341 SEPT4O43236 478 aa16.87■□□□□ 0.29
SNX6-210ENST00000557341 TTLL1O95922 423 aa16.87■□□□□ 0.29
SNX6-210ENST00000557341 TSPY3P0CV98 308 aa16.87■□□□□ 0.29
SNX6-210ENST00000557341 TSPY8P0CW00 308 aa16.87■□□□□ 0.29
SNX6-210ENST00000557341 SYN1P17600 705 aa16.87■□□□□ 0.29
SNX6-210ENST00000557341 STAT3P40763 770 aa16.87■□□□□ 0.29
SNX6-210ENST00000557341 PPARAQ07869 468 aa16.87■□□□□ 0.29
SNX6-210ENST00000557341 KCTD2Q14681 263 aa16.87■□□□□ 0.29
SNX6-210ENST00000557341 REPS2Q8NFH8 660 aa16.87■□□□□ 0.29
SNX6-210ENST00000557341 GDF15Q99988 308 aa16.87■□□□□ 0.29
SNX6-210ENST00000557341 TEX13BQ9BXU2 312 aa16.87■□□□□ 0.29
SNX6-210ENST00000557341 CLIP2Q9UDT6 1046 aa16.87■□□□□ 0.29
SNX6-210ENST00000557341 LRRC26Q2I0M4 334 aa16.86■□□□□ 0.29
SNX6-210ENST00000557341 LRRC47Q8N1G4 583 aaKnown RBP16.86■□□□□ 0.29
SNX6-210ENST00000557341 GMCL1P1Q8NEA9 526 aa16.86■□□□□ 0.29
SNX6-210ENST00000557341 EVI5LQ96CN4 794 aa16.86■□□□□ 0.29
SNX6-210ENST00000557341 YTHDC1Q96MU7 727 aaKnown RBP16.86■□□□□ 0.29
SNX6-210ENST00000557341 MTMR4Q9NYA4 1195 aa16.86■□□□□ 0.29
SNX6-210ENST00000557341 BMP8BP34820 402 aa16.85■□□□□ 0.29
SNX6-210ENST00000557341 AAMPQ13685 434 aa16.85■□□□□ 0.29
SNX6-210ENST00000557341 SNRNP48Q6IEG0 339 aaKnown RBP16.85■□□□□ 0.29
SNX6-210ENST00000557341 PRPF38AQ8NAV1 312 aaKnown RBP16.85■□□□□ 0.29
SNX6-210ENST00000557341 NEDD1Q8NHV4 660 aa16.85■□□□□ 0.29
SNX6-210ENST00000557341 MKL1Q969V6 931 aa16.85■□□□□ 0.29
SNX6-210ENST00000557341 SENP6Q9GZR1 1112 aaPredicted RBP16.85■□□□□ 0.29
SNX6-210ENST00000557341 DIS3Q9Y2L1 958 aaKnown RBP16.85■□□□□ 0.29
SNX6-210ENST00000557341 LCTP09848 1927 aa16.84■□□□□ 0.29
SNX6-210ENST00000557341 LAMA2P24043 3122 aaKnown RBP16.84■□□□□ 0.29
SNX6-210ENST00000557341 KBTBD13C9JR72 458 aa16.84■□□□□ 0.29
SNX6-210ENST00000557341 PGK2P07205 417 aa16.84■□□□□ 0.29
SNX6-210ENST00000557341 MAGEA10P43363 369 aaPredicted RBP16.84■□□□□ 0.29
SNX6-210ENST00000557341 PDE1AP54750 535 aa16.84■□□□□ 0.29
SNX6-210ENST00000557341 ANO1Q5XXA6 986 aa16.84■□□□□ 0.29
SNX6-210ENST00000557341 CCDC129Q6ZRS4 1044 aa16.84■□□□□ 0.29
SNX6-210ENST00000557341 ARRDC4Q8NCT1 418 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms