RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 ANKLE1Q8NAG6 615 aa20.49■□□□□ 0.87
GPHN-211ENST00000556020 SHCBP1Q8NEM2 672 aa20.49■□□□□ 0.87
GPHN-211ENST00000556020 LNPKQ9C0E8 428 aa20.49■□□□□ 0.87
GPHN-211ENST00000556020 ZNF287Q9HBT7 754 aa20.49■□□□□ 0.87
GPHN-211ENST00000556020 CLIP2Q9UDT6 1046 aa20.49■□□□□ 0.87
GPHN-211ENST00000556020 OGDHLQ9ULD0 1010 aa20.49■□□□□ 0.87
GPHN-211ENST00000556020 FRMPD3Q5JV73 1810 aa20.48■□□□□ 0.87
GPHN-211ENST00000556020 ZNF236Q9UL36 1845 aa20.48■□□□□ 0.87
GPHN-211ENST00000556020 CNGA1P29973 690 aa20.48■□□□□ 0.87
GPHN-211ENST00000556020 CYP2C19P33261 490 aa20.48■□□□□ 0.87
GPHN-211ENST00000556020 PPARAQ07869 468 aa20.48■□□□□ 0.87
GPHN-211ENST00000556020 TMEM132BQ14DG7 1078 aa20.48■□□□□ 0.87
GPHN-211ENST00000556020 EVI5LQ96CN4 794 aa20.48■□□□□ 0.87
GPHN-211ENST00000556020 NBPF3Q9H094 633 aa20.48■□□□□ 0.87
GPHN-211ENST00000556020 MROH8Q9H579 483 aa20.48■□□□□ 0.87
GPHN-211ENST00000556020 NYAP2Q9P242 653 aa20.48■□□□□ 0.87
GPHN-211ENST00000556020 STAP2Q9UGK3 403 aa20.48■□□□□ 0.87
GPHN-211ENST00000556020 STRNO43815 780 aa20.47■□□□□ 0.87
GPHN-211ENST00000556020 SLC3A2P08195 630 aaKnown RBP20.47■□□□□ 0.87
GPHN-211ENST00000556020 HOXC6P09630 235 aa20.47■□□□□ 0.87
GPHN-211ENST00000556020 PDE4BQ07343 736 aa20.47■□□□□ 0.87
GPHN-211ENST00000556020 FAM47AQ5JRC9 791 aa20.47■□□□□ 0.87
GPHN-211ENST00000556020 EXOC6Q8TAG9 804 aa20.47■□□□□ 0.87
GPHN-211ENST00000556020 CEP95Q96GE4 821 aa20.47■□□□□ 0.87
GPHN-211ENST00000556020 RWDD1Q9H446 243 aaPredicted RBP20.47■□□□□ 0.87
GPHN-211ENST00000556020 C11orf49Q9H6J7 331 aa20.47■□□□□ 0.87
GPHN-211ENST00000556020 PPP1R9AQ9ULJ8 1098 aa20.47■□□□□ 0.87
GPHN-211ENST00000556020 ZNFX1Q9P2E3 1918 aaKnown RBP20.47■□□□□ 0.87
GPHN-211ENST00000556020 F5H6K3 240 aa20.46■□□□□ 0.87
GPHN-211ENST00000556020 NDUFB10O96000 172 aa20.46■□□□□ 0.87
GPHN-211ENST00000556020 TSPY3P0CV98 308 aa20.46■□□□□ 0.87
GPHN-211ENST00000556020 TSPY8P0CW00 308 aa20.46■□□□□ 0.87
GPHN-211ENST00000556020 MNX1P50219 401 aaPredicted RBP20.46■□□□□ 0.87
GPHN-211ENST00000556020 KLRC3Q07444 240 aa20.46■□□□□ 0.87
GPHN-211ENST00000556020 LRRC47Q8N1G4 583 aaKnown RBP20.46■□□□□ 0.87
GPHN-211ENST00000556020 IGKV6D-41A0A0C4DH26 115 aa20.45■□□□□ 0.86
GPHN-211ENST00000556020 TRIM6-TRIM34B2RNG4 842 aa20.45■□□□□ 0.86
GPHN-211ENST00000556020 VWA5AO00534 786 aa20.45■□□□□ 0.86
GPHN-211ENST00000556020 COBLO75128 1261 aa20.45■□□□□ 0.86
GPHN-211ENST00000556020 CTDSPL2Q05D32 466 aa20.45■□□□□ 0.86
GPHN-211ENST00000556020 AAMPQ13685 434 aa20.45■□□□□ 0.86
GPHN-211ENST00000556020 LHX8Q68G74 356 aa20.45■□□□□ 0.86
GPHN-211ENST00000556020 C7orf61Q8IZ16 206 aa20.45■□□□□ 0.86
GPHN-211ENST00000556020 SLF1Q9BQI6 1058 aa20.45■□□□□ 0.86
GPHN-211ENST00000556020 ISY1Q9ULR0 285 aaKnown RBP20.45■□□□□ 0.86
GPHN-211ENST00000556020 SLC25A27O95847 323 aa20.44■□□□□ 0.86
GPHN-211ENST00000556020 FCER1AP12319 257 aa20.44■□□□□ 0.86
GPHN-211ENST00000556020 STAT3P40763 770 aa20.44■□□□□ 0.86
GPHN-211ENST00000556020 SLC4A3P48751 1232 aa20.44■□□□□ 0.86
GPHN-211ENST00000556020 TFAP4Q01664 338 aa20.44■□□□□ 0.86
GPHN-211ENST00000556020 VPS53Q5VIR6 699 aa20.44■□□□□ 0.86
GPHN-211ENST00000556020 CHMP4CQ96CF2 233 aa20.44■□□□□ 0.86
GPHN-211ENST00000556020 SLC5A4Q9NY91 659 aa20.44■□□□□ 0.86
GPHN-211ENST00000556020 MTMR4Q9NYA4 1195 aa20.44■□□□□ 0.86
GPHN-211ENST00000556020 ADAMTS5Q9UNA0 930 aa20.44■□□□□ 0.86
GPHN-211ENST00000556020 FOXP2O15409 715 aa20.43■□□□□ 0.86
GPHN-211ENST00000556020 TTLL1O95922 423 aa20.43■□□□□ 0.86
GPHN-211ENST00000556020 IGHDP01880 384 aa20.43■□□□□ 0.86
GPHN-211ENST00000556020 RIOX2Q8IUF8 465 aa20.43■□□□□ 0.86
GPHN-211ENST00000556020 SMC5Q8IY18 1101 aa20.43■□□□□ 0.86
GPHN-211ENST00000556020 TRPV1Q8NER1 839 aa20.43■□□□□ 0.86
GPHN-211ENST00000556020 NEDD1Q8NHV4 660 aa20.43■□□□□ 0.86
GPHN-211ENST00000556020 RILPL2Q969X0 211 aa20.43■□□□□ 0.86
GPHN-211ENST00000556020 FAM227BQ96M60 508 aa20.43■□□□□ 0.86
GPHN-211ENST00000556020 MMP19Q99542 508 aa20.43■□□□□ 0.86
GPHN-211ENST00000556020 INCENPQ9NQS7 918 aa20.43■□□□□ 0.86
GPHN-211ENST00000556020 DDX20Q9UHI6 824 aaKnown RBP20.43■□□□□ 0.86
GPHN-211ENST00000556020 PLXNA1Q9UIW2 1896 aa20.42■□□□□ 0.86
GPHN-211ENST00000556020 A0A0D9SFI3 127 aa20.42■□□□□ 0.86
GPHN-211ENST00000556020 PGK2P07205 417 aa20.42■□□□□ 0.86
GPHN-211ENST00000556020 OLFML2BQ68BL8 750 aa20.42■□□□□ 0.86
GPHN-211ENST00000556020 HELLSQ9NRZ9 838 aa20.42■□□□□ 0.86
GPHN-211ENST00000556020 RBM27Q9P2N5 1060 aaKnown RBP20.42■□□□□ 0.86
GPHN-211ENST00000556020 ZNF214Q9UL59 606 aaPredicted RBP20.42■□□□□ 0.86
GPHN-211ENST00000556020 CTDP1Q9Y5B0 961 aaPredicted RBP20.42■□□□□ 0.86
GPHN-211ENST00000556020 TRIOBPQ9H2D6 2365 aa20.42■□□□□ 0.86
GPHN-211ENST00000556020 CYBAP13498 195 aa20.41■□□□□ 0.86
GPHN-211ENST00000556020 NMIQ13287 307 aaPredicted RBP20.41■□□□□ 0.86
GPHN-211ENST00000556020 KCTD2Q14681 263 aa20.41■□□□□ 0.86
GPHN-211ENST00000556020 ANO1Q5XXA6 986 aa20.41■□□□□ 0.86
GPHN-211ENST00000556020 SNRNP48Q6IEG0 339 aaKnown RBP20.41■□□□□ 0.86
GPHN-211ENST00000556020 ABRAQ8N0Z2 381 aa20.41■□□□□ 0.86
GPHN-211ENST00000556020 CPXCR1Q8N123 301 aa20.41■□□□□ 0.86
GPHN-211ENST00000556020 REPS2Q8NFH8 660 aa20.41■□□□□ 0.86
GPHN-211ENST00000556020 KIFC2Q96AC6 838 aa20.41■□□□□ 0.86
GPHN-211ENST00000556020 ZMYND8Q9ULU4 1186 aaPredicted RBP20.41■□□□□ 0.86
GPHN-211ENST00000556020 PFASO15067 1338 aa20.41■□□□□ 0.86
GPHN-211ENST00000556020 PLIN4Q96Q06 1357 aa20.41■□□□□ 0.86
GPHN-211ENST00000556020 TSPY2A6NKD2 308 aa20.4■□□□□ 0.86
GPHN-211ENST00000556020 FXR1P51114 621 aaKnown RBP eCLIP20.4■□□□□ 0.86
GPHN-211ENST00000556020 MCMDC2Q4G0Z9 681 aa20.4■□□□□ 0.86
GPHN-211ENST00000556020 PRAMEF19Q5SWL8 479 aa20.4■□□□□ 0.86
GPHN-211ENST00000556020 SLFN13Q68D06 897 aa20.4■□□□□ 0.86
GPHN-211ENST00000556020 CHD1LQ86WJ1 897 aa20.4■□□□□ 0.86
GPHN-211ENST00000556020 PRPF38AQ8NAV1 312 aaKnown RBP20.4■□□□□ 0.86
GPHN-211ENST00000556020 MKL1Q969V6 931 aa20.4■□□□□ 0.86
GPHN-211ENST00000556020 MAML3Q96JK9 1138 aa20.4■□□□□ 0.86
GPHN-211ENST00000556020 TOMM22Q9NS69 142 aa20.4■□□□□ 0.86
GPHN-211ENST00000556020 RANBP6O60518 1105 aaKnown RBP20.39■□□□□ 0.85
GPHN-211ENST00000556020 MSCO60682 206 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms