RNA–Protein interactions for RNA: ENST00000555246.5

LINC00871-201, long intergenic non-protein coding RNA 871, humanhuman

TSL 5 BASIC

Gene LINC00871, Length 408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-201ENST00000555246 DEFB118Q96PH6 123 aa6.11□□□□□ -1.43
LINC00871-201ENST00000555246 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.11□□□□□ -1.43
LINC00871-201ENST00000555246 BIN2Q9UBW5 565 aaPredicted RBP6.11□□□□□ -1.43
LINC00871-201ENST00000555246 OGDHLQ9ULD0 1010 aa6.11□□□□□ -1.43
LINC00871-201ENST00000555246 CDK5RAP2Q96SN8 1893 aa6.11□□□□□ -1.43
LINC00871-201ENST00000555246 PLXNB2O15031 1838 aa6.11□□□□□ -1.43
LINC00871-201ENST00000555246 ZNF236Q9UL36 1845 aa6.11□□□□□ -1.43
LINC00871-201ENST00000555246 ZBED9Q6R2W3 1325 aa6.1□□□□□ -1.43
LINC00871-201ENST00000555246 SURF6O75683 361 aaKnown RBP6.1□□□□□ -1.43
LINC00871-201ENST00000555246 HLA-DOAP06340 250 aa6.1□□□□□ -1.43
LINC00871-201ENST00000555246 HOXC6P09630 235 aa6.1□□□□□ -1.43
LINC00871-201ENST00000555246 COL6A1P12109 1028 aa6.1□□□□□ -1.43
LINC00871-201ENST00000555246 ZAP70P43403 619 aa6.1□□□□□ -1.43
LINC00871-201ENST00000555246 ERVK-9P63128 1117 aa6.1□□□□□ -1.43
LINC00871-201ENST00000555246 ERVK-24P63145 666 aa6.1□□□□□ -1.43
LINC00871-201ENST00000555246 IRX3P78415 501 aaPredicted RBP6.1□□□□□ -1.43
LINC00871-201ENST00000555246 GABPAQ06546 454 aa6.1□□□□□ -1.43
LINC00871-201ENST00000555246 MORN1Q5T089 497 aa6.1□□□□□ -1.43
LINC00871-201ENST00000555246 CEP85Q6P2H3 762 aa6.1□□□□□ -1.43
LINC00871-201ENST00000555246 POTEEQ6S8J3 1075 aa6.1□□□□□ -1.43
LINC00871-201ENST00000555246 NECAB2Q7Z6G3 386 aa6.1□□□□□ -1.43
LINC00871-201ENST00000555246 ERC1Q8IUD2 1116 aa6.1□□□□□ -1.43
LINC00871-201ENST00000555246 FTSJ3Q8IY81 847 aaKnown RBP6.1□□□□□ -1.43
LINC00871-201ENST00000555246 GPRC5AQ8NFJ5 357 aa6.1□□□□□ -1.43
LINC00871-201ENST00000555246 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.1□□□□□ -1.43
LINC00871-201ENST00000555246 LRRN4Q8WUT4 740 aa6.1□□□□□ -1.43
LINC00871-201ENST00000555246 TRIB2Q92519 343 aa6.1□□□□□ -1.43
LINC00871-201ENST00000555246 FRAT1Q92837 279 aaPredicted RBP6.1□□□□□ -1.43
LINC00871-201ENST00000555246 GDF15Q99988 308 aa6.1□□□□□ -1.43
LINC00871-201ENST00000555246 RIOK1Q9BRS2 568 aaKnown RBP6.1□□□□□ -1.43
LINC00871-201ENST00000555246 KIAA1683Q9H0B3 1180 aa6.1□□□□□ -1.43
LINC00871-201ENST00000555246 TXNRD2Q9NNW7 524 aa6.1□□□□□ -1.43
LINC00871-201ENST00000555246 PIH1D3Q9NQM4 214 aaKnown RBP6.1□□□□□ -1.43
LINC00871-201ENST00000555246 TLR7Q9NYK1 1049 aaKnown RBP6.1□□□□□ -1.43
LINC00871-201ENST00000555246 TMOD4Q9NZQ9 345 aa6.1□□□□□ -1.43
LINC00871-201ENST00000555246 SERPINB13Q9UIV8 391 aa6.1□□□□□ -1.43
LINC00871-201ENST00000555246 PALD1Q9ULE6 856 aa6.1□□□□□ -1.43
LINC00871-201ENST00000555246 CEP290O15078 2479 aa6.1□□□□□ -1.43
LINC00871-201ENST00000555246 A0A0G2JMZ2 1700 aa6.1□□□□□ -1.43
LINC00871-201ENST00000555246 AK9Q5TCS8 1911 aa6.09□□□□□ -1.43
LINC00871-201ENST00000555246 TRIOBPQ9H2D6 2365 aa6.09□□□□□ -1.43
LINC00871-201ENST00000555246 CFAP99D6REC4 459 aa6.09□□□□□ -1.43
LINC00871-201ENST00000555246 PSEN2P49810 448 aa6.09□□□□□ -1.43
LINC00871-201ENST00000555246 USP14P54578 494 aa6.09□□□□□ -1.43
LINC00871-201ENST00000555246 SHROOM1Q2M3G4 852 aaPredicted RBP6.09□□□□□ -1.43
LINC00871-201ENST00000555246 HSP90AB4PQ58FF6 505 aa6.09□□□□□ -1.43
LINC00871-201ENST00000555246 USP17L2Q6R6M4 530 aa6.09□□□□□ -1.43
LINC00871-201ENST00000555246 MAPKAPK5Q8IW41 473 aa6.09□□□□□ -1.43
LINC00871-201ENST00000555246 CRACR2BQ8N4Y2 399 aaPredicted RBP6.09□□□□□ -1.43
LINC00871-201ENST00000555246 DPF3Q92784 378 aa6.09□□□□□ -1.43
LINC00871-201ENST00000555246 PAWRQ96IZ0 340 aaKnown RBP6.09□□□□□ -1.43
LINC00871-201ENST00000555246 P2RX7Q99572 595 aaKnown RBP6.09□□□□□ -1.43
LINC00871-201ENST00000555246 APBA2Q99767 749 aa6.09□□□□□ -1.43
LINC00871-201ENST00000555246 NUDT12Q9BQG2 462 aa6.09□□□□□ -1.43
LINC00871-201ENST00000555246 NBPF3Q9H094 633 aa6.09□□□□□ -1.43
LINC00871-201ENST00000555246 RBPJLQ9UBG7 517 aa6.09□□□□□ -1.43
LINC00871-201ENST00000555246 RABGAP1Q9Y3P9 1069 aa6.09□□□□□ -1.43
LINC00871-201ENST00000555246 LAMA2P24043 3122 aaKnown RBP6.09□□□□□ -1.43
LINC00871-201ENST00000555246 DNAH12Q6ZR08 3092 aa6.09□□□□□ -1.44
LINC00871-201ENST00000555246 ROBO3Q96MS0 1386 aa6.08□□□□□ -1.44
LINC00871-201ENST00000555246 PFASO15067 1338 aa6.08□□□□□ -1.44
LINC00871-201ENST00000555246 USP17L15C9J2P7 530 aa6.08□□□□□ -1.44
LINC00871-201ENST00000555246 USP17L13C9JLJ4 530 aa6.08□□□□□ -1.44
LINC00871-201ENST00000555246 USP17L11C9JVI0 530 aa6.08□□□□□ -1.44
LINC00871-201ENST00000555246 USP17L18D6R9N7 530 aa6.08□□□□□ -1.44
LINC00871-201ENST00000555246 USP17L22D6RA61 530 aa6.08□□□□□ -1.44
LINC00871-201ENST00000555246 USP17L17D6RBQ6 530 aa6.08□□□□□ -1.44
LINC00871-201ENST00000555246 USP17L19D6RCP7 530 aa6.08□□□□□ -1.44
LINC00871-201ENST00000555246 USP17L20D6RJB6 530 aa6.08□□□□□ -1.44
LINC00871-201ENST00000555246 CNMDO75829 334 aa6.08□□□□□ -1.44
LINC00871-201ENST00000555246 IDH1O75874 414 aaKnown RBP6.08□□□□□ -1.44
LINC00871-201ENST00000555246 GDF11O95390 407 aa6.08□□□□□ -1.44
LINC00871-201ENST00000555246 GH2P01242 217 aa6.08□□□□□ -1.44
LINC00871-201ENST00000555246 TFRCP02786 760 aaKnown RBP6.08□□□□□ -1.44
LINC00871-201ENST00000555246 ZKSCAN1P17029 563 aaPredicted RBP6.08□□□□□ -1.44
LINC00871-201ENST00000555246 VCAM1P19320 739 aa6.08□□□□□ -1.44
LINC00871-201ENST00000555246 CYP7A1P22680 504 aa6.08□□□□□ -1.44
LINC00871-201ENST00000555246 SHMT1P34896 483 aa6.08□□□□□ -1.44
LINC00871-201ENST00000555246 RGS2P41220 211 aa6.08□□□□□ -1.44
LINC00871-201ENST00000555246 CCNA1P78396 465 aa6.08□□□□□ -1.44
LINC00871-201ENST00000555246 USP17L24Q0WX57 530 aa6.08□□□□□ -1.44
LINC00871-201ENST00000555246 MAP3K12Q12852 859 aa6.08□□□□□ -1.44
LINC00871-201ENST00000555246 OS9Q13438 667 aaPredicted RBP6.08□□□□□ -1.44
LINC00871-201ENST00000555246 PDE3AQ14432 1141 aa6.08□□□□□ -1.44
LINC00871-201ENST00000555246 GRB14Q14449 540 aa6.08□□□□□ -1.44
LINC00871-201ENST00000555246 TTF1Q15361 905 aaPredicted RBP6.08□□□□□ -1.44
LINC00871-201ENST00000555246 LRIT3Q3SXY7 679 aa6.08□□□□□ -1.44
LINC00871-201ENST00000555246 CATSPERGQ6ZRH7 1159 aa6.08□□□□□ -1.44
LINC00871-201ENST00000555246 GPR142Q7Z601 462 aa6.08□□□□□ -1.44
LINC00871-201ENST00000555246 TTC6Q86TZ1 520 aa6.08□□□□□ -1.44
LINC00871-201ENST00000555246 ITPRIPQ8IWB1 547 aa6.08□□□□□ -1.44
LINC00871-201ENST00000555246 DIS3LQ8TF46 1054 aaKnown RBP6.08□□□□□ -1.44
LINC00871-201ENST00000555246 PORCNQ9H237 461 aa6.08□□□□□ -1.44
LINC00871-201ENST00000555246 SEPT9Q9UHD8 586 aaPredicted RBP6.08□□□□□ -1.44
LINC00871-201ENST00000555246 RABGEF1Q9UJ41 708 aa6.08□□□□□ -1.44
LINC00871-201ENST00000555246 A0A0C4DFX4 3053 aa6.07□□□□□ -1.44
LINC00871-201ENST00000555246 ALPK3Q96L96 1907 aa6.07□□□□□ -1.44
LINC00871-201ENST00000555246 TCRBV5S4A2TA0A5A2 114 aa6.07□□□□□ -1.44
LINC00871-201ENST00000555246 SLC15A5A6NIM6 579 aa6.07□□□□□ -1.44
LINC00871-201ENST00000555246 MSCO60682 206 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms