RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 NME2P22392 152 aa5.84□□□□□ -1.47
VTI1B-203ENST00000554636 ZC3H6P61129 1189 aaKnown RBP5.84□□□□□ -1.47
VTI1B-203ENST00000554636 CDK5R2Q13319 367 aa5.84□□□□□ -1.47
VTI1B-203ENST00000554636 TTLL4Q14679 1199 aa5.84□□□□□ -1.47
VTI1B-203ENST00000554636 GRIN3AQ8TCU5 1115 aa5.84□□□□□ -1.47
VTI1B-203ENST00000554636 GPBAR1Q8TDU6 330 aa5.84□□□□□ -1.47
VTI1B-203ENST00000554636 NECAB3Q96P71 396 aaPredicted RBP5.84□□□□□ -1.47
VTI1B-203ENST00000554636 SRCIN1Q9C0H9 1055 aa5.84□□□□□ -1.47
VTI1B-203ENST00000554636 ATXN3LQ9H3M9 355 aa5.84□□□□□ -1.47
VTI1B-203ENST00000554636 CRIM1Q9NZV1 1036 aa5.84□□□□□ -1.47
VTI1B-203ENST00000554636 TTF2Q9UNY4 1162 aaKnown RBP5.84□□□□□ -1.47
VTI1B-203ENST00000554636 CSADQ9Y600 493 aa5.84□□□□□ -1.47
VTI1B-203ENST00000554636 WNK3Q9BYP7 1800 aa5.83□□□□□ -1.48
VTI1B-203ENST00000554636 A0A1W2PP64 1363 aa5.83□□□□□ -1.48
VTI1B-203ENST00000554636 USP31Q70CQ4 1352 aa5.83□□□□□ -1.48
VTI1B-203ENST00000554636 SPATA31A1Q5TZJ5 1347 aa5.83□□□□□ -1.48
VTI1B-203ENST00000554636 TTC21AQ8NDW8 1320 aa5.83□□□□□ -1.48
VTI1B-203ENST00000554636 KIAA1324LA8MWY0 1029 aaPredicted RBP5.83□□□□□ -1.48
VTI1B-203ENST00000554636 ADAMTS4O75173 837 aa5.83□□□□□ -1.48
VTI1B-203ENST00000554636 GCP02774 474 aa5.83□□□□□ -1.48
VTI1B-203ENST00000554636 HNRNPUQ00839 825 aaKnown RBP eCLIP5.83□□□□□ -1.48
VTI1B-203ENST00000554636 KIF4BQ2VIQ3 1234 aa5.83□□□□□ -1.48
VTI1B-203ENST00000554636 INTS5Q6P9B9 1019 aaKnown RBP5.83□□□□□ -1.48
VTI1B-203ENST00000554636 ZNF765Q7L2R6 523 aa5.83□□□□□ -1.48
VTI1B-203ENST00000554636 PUS7Q96PZ0 661 aaKnown RBP5.83□□□□□ -1.48
VTI1B-203ENST00000554636 PCGF6Q9BYE7 350 aa5.83□□□□□ -1.48
VTI1B-203ENST00000554636 KRT82Q9NSB4 513 aa5.83□□□□□ -1.48
VTI1B-203ENST00000554636 FAM8A1Q9UBU6 413 aa5.83□□□□□ -1.48
VTI1B-203ENST00000554636 CCDC9Q9Y3X0 531 aaKnown RBP5.83□□□□□ -1.48
VTI1B-203ENST00000554636 ABCC6O95255 1503 aa5.83□□□□□ -1.48
VTI1B-203ENST00000554636 OVOS2A0A0J9YW53 1432 aa5.82□□□□□ -1.48
VTI1B-203ENST00000554636 OVOS2Q6IE36 1432 aa5.82□□□□□ -1.48
VTI1B-203ENST00000554636 EDC4Q6P2E9 1401 aaKnown RBP5.82□□□□□ -1.48
VTI1B-203ENST00000554636 PARP4Q9UKK3 1724 aaKnown RBP5.82□□□□□ -1.48
VTI1B-203ENST00000554636 AATKQ6ZMQ8 1374 aa5.82□□□□□ -1.48
VTI1B-203ENST00000554636 KTN1Q86UP2 1357 aaKnown RBP5.82□□□□□ -1.48
VTI1B-203ENST00000554636 NINLQ9Y2I6 1382 aa5.82□□□□□ -1.48
VTI1B-203ENST00000554636 ST20-MTHFSA0A0A6YYL1 179 aa5.82□□□□□ -1.48
VTI1B-203ENST00000554636 DCDC2CA8MYV0 355 aa5.82□□□□□ -1.48
VTI1B-203ENST00000554636 CYP26A1O43174 497 aa5.82□□□□□ -1.48
VTI1B-203ENST00000554636 SPINK2P20155 84 aa5.82□□□□□ -1.48
VTI1B-203ENST00000554636 EAPPQ56P03 285 aaPredicted RBP5.82□□□□□ -1.48
VTI1B-203ENST00000554636 RASIP1Q5U651 963 aa5.82□□□□□ -1.48
VTI1B-203ENST00000554636 SMYD4Q8IYR2 804 aaPredicted RBP5.82□□□□□ -1.48
VTI1B-203ENST00000554636 GATA6Q92908 595 aa5.82□□□□□ -1.48
VTI1B-203ENST00000554636 DUSP9Q99956 384 aaKnown RBP5.82□□□□□ -1.48
VTI1B-203ENST00000554636 METTL22Q9BUU2 404 aaPredicted RBP5.82□□□□□ -1.48
VTI1B-203ENST00000554636 EMILIN2Q9BXX0 1053 aa5.82□□□□□ -1.48
VTI1B-203ENST00000554636 CEP44Q9C0F1 390 aa5.82□□□□□ -1.48
VTI1B-203ENST00000554636 GSX1Q9H4S2 264 aaPredicted RBP5.82□□□□□ -1.48
VTI1B-203ENST00000554636 SSU72Q9NP77 194 aaKnown RBP5.82□□□□□ -1.48
VTI1B-203ENST00000554636 PICK1Q9NRD5 415 aa5.82□□□□□ -1.48
VTI1B-203ENST00000554636 DISC1Q9NRI5 854 aa5.82□□□□□ -1.48
VTI1B-203ENST00000554636 C1GALT1Q9NS00 363 aa5.82□□□□□ -1.48
VTI1B-203ENST00000554636 PCDHGC5Q9Y5F6 944 aa5.82□□□□□ -1.48
VTI1B-203ENST00000554636 RGPD5Q99666 1765 aa5.82□□□□□ -1.48
VTI1B-203ENST00000554636 TNS1Q9HBL0 1735 aaKnown RBP5.82□□□□□ -1.48
VTI1B-203ENST00000554636 BLMP54132 1417 aaPredicted RBP5.82□□□□□ -1.48
VTI1B-203ENST00000554636 MYOM1P52179 1685 aa5.82□□□□□ -1.48
VTI1B-203ENST00000554636 LRRC37A3O60309 1634 aa5.81□□□□□ -1.48
VTI1B-203ENST00000554636 GIPC1O14908 333 aa5.81□□□□□ -1.48
VTI1B-203ENST00000554636 PRPF40AO75400 957 aaKnown RBP5.81□□□□□ -1.48
VTI1B-203ENST00000554636 NEFMP07197 916 aa5.81□□□□□ -1.48
VTI1B-203ENST00000554636 FOSL1P15407 271 aa5.81□□□□□ -1.48
VTI1B-203ENST00000554636 BMP6P22004 513 aa5.81□□□□□ -1.48
VTI1B-203ENST00000554636 EIF4BP23588 611 aaKnown RBP5.81□□□□□ -1.48
VTI1B-203ENST00000554636 GP2P55259 537 aaKnown RBP5.81□□□□□ -1.48
VTI1B-203ENST00000554636 ZNF252P-AS1Q0IIN9 211 aa5.81□□□□□ -1.48
VTI1B-203ENST00000554636 DUSP27Q5VZP5 1158 aa5.81□□□□□ -1.48
VTI1B-203ENST00000554636 PCNX4Q63HM2 1172 aa5.81□□□□□ -1.48
VTI1B-203ENST00000554636 LLGL2Q6P1M3 1020 aa5.81□□□□□ -1.48
VTI1B-203ENST00000554636 KRT27Q7Z3Y8 459 aa5.81□□□□□ -1.48
VTI1B-203ENST00000554636 ARHGEF25Q86VW2 580 aa5.81□□□□□ -1.48
VTI1B-203ENST00000554636 SLC12A5Q9H2X9 1139 aa5.81□□□□□ -1.48
VTI1B-203ENST00000554636 PPM1HQ9ULR3 514 aa5.81□□□□□ -1.48
VTI1B-203ENST00000554636 SAMM50Q9Y512 469 aa5.81□□□□□ -1.48
VTI1B-203ENST00000554636 RGPD1P0DJD0 1748 aa5.81□□□□□ -1.48
VTI1B-203ENST00000554636 CRB1P82279 1406 aa5.81□□□□□ -1.48
VTI1B-203ENST00000554636 ANKRD36BQ8N2N9 1353 aa5.8□□□□□ -1.48
VTI1B-203ENST00000554636 LTN1O94822 1766 aa5.8□□□□□ -1.48
VTI1B-203ENST00000554636 PEAK1Q9H792 1746 aa5.8□□□□□ -1.48
VTI1B-203ENST00000554636 FAM87AP0C7U9 286 aa5.8□□□□□ -1.48
VTI1B-203ENST00000554636 GNA15P30679 374 aa5.8□□□□□ -1.48
VTI1B-203ENST00000554636 MAP3K11Q16584 847 aa5.8□□□□□ -1.48
VTI1B-203ENST00000554636 PPM1JQ5JR12 505 aa5.8□□□□□ -1.48
VTI1B-203ENST00000554636 HDGFL2Q7Z4V5 671 aaPredicted RBP5.8□□□□□ -1.48
VTI1B-203ENST00000554636 NME9Q86XW9 330 aa5.8□□□□□ -1.48
VTI1B-203ENST00000554636 DTX1Q86Y01 620 aa5.8□□□□□ -1.48
VTI1B-203ENST00000554636 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.8□□□□□ -1.48
VTI1B-203ENST00000554636 ISL2Q96A47 359 aa5.8□□□□□ -1.48
VTI1B-203ENST00000554636 FAM161BQ96MY7 647 aa5.8□□□□□ -1.48
VTI1B-203ENST00000554636 ANGEL1Q9UNK9 670 aaKnown RBP5.8□□□□□ -1.48
VTI1B-203ENST00000554636 OAS3Q9Y6K5 1087 aaKnown RBP5.8□□□□□ -1.48
VTI1B-203ENST00000554636 DISP2A7MBM2 1401 aa5.8□□□□□ -1.48
VTI1B-203ENST00000554636 SYNGAP1Q96PV0 1343 aa5.79□□□□□ -1.48
VTI1B-203ENST00000554636 ZBTB7CA1YPR0 619 aa5.79□□□□□ -1.48
VTI1B-203ENST00000554636 CCDC85BQ15834 202 aaPredicted RBP5.79□□□□□ -1.48
VTI1B-203ENST00000554636 SEZ6L2Q6UXD5 910 aa5.79□□□□□ -1.48
VTI1B-203ENST00000554636 C12orf40Q86WS4 652 aa5.79□□□□□ -1.48
VTI1B-203ENST00000554636 TCP11L2Q8N4U5 519 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms