RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 KIAA0355O15063 1070 aa18.58■□□□□ 0.56
BRF1-220ENST00000552127 BMP1P13497 986 aa18.58■□□□□ 0.56
BRF1-220ENST00000552127 PBX2P40425 430 aa18.58■□□□□ 0.56
BRF1-220ENST00000552127 GRB14Q14449 540 aa18.58■□□□□ 0.56
BRF1-220ENST00000552127 SHROOM1Q2M3G4 852 aaPredicted RBP18.58■□□□□ 0.56
BRF1-220ENST00000552127 TTC6Q86TZ1 520 aa18.58■□□□□ 0.56
BRF1-220ENST00000552127 EPHX3Q9H6B9 360 aa18.58■□□□□ 0.56
BRF1-220ENST00000552127 IGFBP4P22692 258 aa18.57■□□□□ 0.56
BRF1-220ENST00000552127 LRRC41Q15345 812 aa18.57■□□□□ 0.56
BRF1-220ENST00000552127 ALYREFQ86V81 257 aaKnown RBP18.57■□□□□ 0.56
BRF1-220ENST00000552127 PBX4Q9BYU1 374 aa18.57■□□□□ 0.56
BRF1-220ENST00000552127 ARMT1Q9H993 441 aa18.57■□□□□ 0.56
BRF1-220ENST00000552127 EMILIN3Q9NT22 766 aa18.57■□□□□ 0.56
BRF1-220ENST00000552127 IVNS1ABPQ9Y6Y0 642 aa18.57■□□□□ 0.56
BRF1-220ENST00000552127 CHD7Q9P2D1 2997 aa18.56■□□□□ 0.56
BRF1-220ENST00000552127 GRXCR1A8MXD5 290 aa18.56■□□□□ 0.56
BRF1-220ENST00000552127 SEPT4O43236 478 aa18.56■□□□□ 0.56
BRF1-220ENST00000552127 MBD4O95243 580 aa18.56■□□□□ 0.56
BRF1-220ENST00000552127 UBE3CQ15386 1083 aa18.56■□□□□ 0.56
BRF1-220ENST00000552127 SLFNL1Q499Z3 407 aa18.56■□□□□ 0.56
BRF1-220ENST00000552127 TATDN1Q6P1N9 297 aa18.56■□□□□ 0.56
BRF1-220ENST00000552127 CCDC129Q6ZRS4 1044 aa18.56■□□□□ 0.56
BRF1-220ENST00000552127 SDR42E1Q8WUS8 393 aa18.56■□□□□ 0.56
BRF1-220ENST00000552127 POLR3DP05423 398 aaPredicted RBP18.55■□□□□ 0.56
BRF1-220ENST00000552127 PLCD1P51178 756 aa18.55■□□□□ 0.56
BRF1-220ENST00000552127 TSHZ3Q63HK5 1081 aa18.55■□□□□ 0.56
BRF1-220ENST00000552127 ZSCAN25Q6NSZ9 544 aa18.55■□□□□ 0.56
BRF1-220ENST00000552127 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.55■□□□□ 0.567e-7■□□□□ 10.8
BRF1-220ENST00000552127 DCP1AQ9NPI6 582 aaPredicted RBP18.55■□□□□ 0.56
BRF1-220ENST00000552127 MCM9Q9NXL9 1143 aa18.55■□□□□ 0.56
BRF1-220ENST00000552127 CXXC1Q9P0U4 656 aaPredicted RBP18.55■□□□□ 0.56
BRF1-220ENST00000552127 MUC6Q6W4X9 2439 aa18.54■□□□□ 0.56
BRF1-220ENST00000552127 PQBP1O60828 265 aaKnown RBP18.54■□□□□ 0.56
BRF1-220ENST00000552127 GH2P01242 217 aa18.54■□□□□ 0.56
BRF1-220ENST00000552127 CHGBP05060 677 aa18.54■□□□□ 0.56
BRF1-220ENST00000552127 SHMT1P34896 483 aa18.54■□□□□ 0.56
BRF1-220ENST00000552127 TMEM39AQ9NV64 488 aa18.54■□□□□ 0.56
BRF1-220ENST00000552127 TTC41PQ6P2S7 1318 aa18.53■□□□□ 0.56
BRF1-220ENST00000552127 TFF2Q03403 129 aa18.53■□□□□ 0.56
BRF1-220ENST00000552127 GABPAQ06546 454 aa18.53■□□□□ 0.56
BRF1-220ENST00000552127 CERKLQ49MI3 558 aaPredicted RBP18.53■□□□□ 0.56
BRF1-220ENST00000552127 FAM47AQ5JRC9 791 aa18.53■□□□□ 0.56
BRF1-220ENST00000552127 TMEM31Q5JXX7 168 aa18.53■□□□□ 0.56
BRF1-220ENST00000552127 OLFML2BQ68BL8 750 aa18.53■□□□□ 0.56
BRF1-220ENST00000552127 USP17L2Q6R6M4 530 aa18.53■□□□□ 0.56
BRF1-220ENST00000552127 DPP9Q86TI2 863 aa18.53■□□□□ 0.56
BRF1-220ENST00000552127 SNX27Q96L92 541 aa18.53■□□□□ 0.56
BRF1-220ENST00000552127 TSPYL2Q9H2G4 693 aaPredicted RBP18.53■□□□□ 0.56
BRF1-220ENST00000552127 BTBD7Q9P203 1132 aa18.53■□□□□ 0.56
BRF1-220ENST00000552127 PHF24Q9UPV7 400 aa18.53■□□□□ 0.56
BRF1-220ENST00000552127 PARP14Q460N5 1801 aa18.52■□□□□ 0.56
BRF1-220ENST00000552127 USP17L15C9J2P7 530 aa18.52■□□□□ 0.56
BRF1-220ENST00000552127 USP17L13C9JLJ4 530 aa18.52■□□□□ 0.56
BRF1-220ENST00000552127 USP17L11C9JVI0 530 aa18.52■□□□□ 0.56
BRF1-220ENST00000552127 USP17L18D6R9N7 530 aa18.52■□□□□ 0.56
BRF1-220ENST00000552127 USP17L22D6RA61 530 aa18.52■□□□□ 0.56
BRF1-220ENST00000552127 USP17L17D6RBQ6 530 aa18.52■□□□□ 0.56
BRF1-220ENST00000552127 USP17L19D6RCP7 530 aa18.52■□□□□ 0.56
BRF1-220ENST00000552127 USP17L20D6RJB6 530 aa18.52■□□□□ 0.56
BRF1-220ENST00000552127 PRKAB2O43741 272 aa18.52■□□□□ 0.56
BRF1-220ENST00000552127 EVX2Q03828 476 aa18.52■□□□□ 0.56
BRF1-220ENST00000552127 USP17L24Q0WX57 530 aa18.52■□□□□ 0.56
BRF1-220ENST00000552127 ABCB5Q2M3G0 1257 aa18.52■□□□□ 0.56
BRF1-220ENST00000552127 PRAMEF19Q5SWL8 479 aa18.52■□□□□ 0.56
BRF1-220ENST00000552127 KBTBD3Q8NAB2 608 aa18.52■□□□□ 0.56
BRF1-220ENST00000552127 ATP8A2Q9NTI2 1148 aa18.52■□□□□ 0.56
BRF1-220ENST00000552127 GREB1LQ9C091 1923 aaPredicted RBP18.52■□□□□ 0.56
BRF1-220ENST00000552127 ZNF236Q9UL36 1845 aa18.51■□□□□ 0.55
BRF1-220ENST00000552127 CYP2D6P10635 497 aa18.51■□□□□ 0.55
BRF1-220ENST00000552127 KCNQ1P51787 676 aa18.51■□□□□ 0.55
BRF1-220ENST00000552127 FAAP100Q0VG06 881 aa18.51■□□□□ 0.55
BRF1-220ENST00000552127 SMCHD1A6NHR9 2005 aa18.5■□□□□ 0.55
BRF1-220ENST00000552127 ERC2O15083 957 aa18.5■□□□□ 0.55
BRF1-220ENST00000552127 ADORA2AP29274 412 aa18.5■□□□□ 0.55
BRF1-220ENST00000552127 HDAC1Q13547 482 aaPredicted RBP18.5■□□□□ 0.55
BRF1-220ENST00000552127 RAB3GAP1Q15042 981 aa18.5■□□□□ 0.55
BRF1-220ENST00000552127 ZYXQ15942 572 aaKnown RBP18.5■□□□□ 0.55
BRF1-220ENST00000552127 RASIP1Q5U651 963 aa18.5■□□□□ 0.55
BRF1-220ENST00000552127 CATSPERGQ6ZRH7 1159 aa18.5■□□□□ 0.55
BRF1-220ENST00000552127 SLC44A5Q8NCS7 719 aa18.5■□□□□ 0.55
BRF1-220ENST00000552127 OTUD7AQ8TE49 926 aaPredicted RBP18.5■□□□□ 0.55
BRF1-220ENST00000552127 C12orf42Q96LP6 360 aa18.5■□□□□ 0.55
BRF1-220ENST00000552127 FEZ1Q99689 392 aa18.5■□□□□ 0.55
BRF1-220ENST00000552127 PUS7LQ9H0K6 701 aaKnown RBP18.5■□□□□ 0.55
BRF1-220ENST00000552127 CABP5Q9NP86 173 aa18.5■□□□□ 0.55
BRF1-220ENST00000552127 GBF1Q92538 1859 aa18.5■□□□□ 0.55
BRF1-220ENST00000552127 A0A0G2JMZ2 1700 aa18.49■□□□□ 0.55
BRF1-220ENST00000552127 MX1P20591 662 aa18.49■□□□□ 0.55
BRF1-220ENST00000552127 AAMPQ13685 434 aa18.49■□□□□ 0.55
BRF1-220ENST00000552127 AAK1Q2M2I8 961 aa18.49■□□□□ 0.55
BRF1-220ENST00000552127 TMEM240Q5SV17 173 aa18.49■□□□□ 0.55
BRF1-220ENST00000552127 LBX2Q6XYB7 198 aa18.49■□□□□ 0.55
BRF1-220ENST00000552127 C16orf59Q7L2K0 433 aa18.49■□□□□ 0.55
BRF1-220ENST00000552127 AMOTL1Q8IY63 956 aa18.49■□□□□ 0.55
BRF1-220ENST00000552127 PI4K2BQ8TCG2 481 aa18.49■□□□□ 0.55
BRF1-220ENST00000552127 DDRGK1Q96HY6 314 aa18.49■□□□□ 0.55
BRF1-220ENST00000552127 SWAP70Q9UH65 585 aa18.49■□□□□ 0.55
BRF1-220ENST00000552127 SLC4A4Q9Y6R1 1079 aa18.49■□□□□ 0.55
BRF1-220ENST00000552127 SALL3Q9BXA9 1300 aa18.49■□□□□ 0.55
BRF1-220ENST00000552127 A0A1W2PQ45 241 aaPredicted RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms