RNA–Protein interactions for RNA: ENST00000551549.1

GCN1-208, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 2

Gene GCN1, Length 258 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-208ENST00000551549 NCAPG2Q86XI2 1143 aa11.62□□□□□ -0.55
GCN1-208ENST00000551549 ZNF444Q8N0Y2 327 aaPredicted RBP11.62□□□□□ -0.55
GCN1-208ENST00000551549 SHCBP1Q8NEM2 672 aa11.62□□□□□ -0.55
GCN1-208ENST00000551549 TRPV1Q8NER1 839 aa11.62□□□□□ -0.55
GCN1-208ENST00000551549 NACAP1Q9BZK3 213 aa11.62□□□□□ -0.55
GCN1-208ENST00000551549 CLIP2Q9UDT6 1046 aa11.62□□□□□ -0.55
GCN1-208ENST00000551549 ADAMTS5Q9UNA0 930 aa11.62□□□□□ -0.55
GCN1-208ENST00000551549 NR2E3Q9Y5X4 410 aa11.62□□□□□ -0.55
GCN1-208ENST00000551549 A0A0C4DFX4 3053 aa11.62□□□□□ -0.55
GCN1-208ENST00000551549 F5H6K3 240 aa11.61□□□□□ -0.55
GCN1-208ENST00000551549 FOXP2O15409 715 aa11.61□□□□□ -0.55
GCN1-208ENST00000551549 STRNO43815 780 aa11.61□□□□□ -0.55
GCN1-208ENST00000551549 COBLO75128 1261 aa11.61□□□□□ -0.55
GCN1-208ENST00000551549 NDUFB10O96000 172 aa11.61□□□□□ -0.55
GCN1-208ENST00000551549 IGHA2P01877 340 aa11.61□□□□□ -0.55
GCN1-208ENST00000551549 PDE1AP54750 535 aa11.61□□□□□ -0.55
GCN1-208ENST00000551549 KLRC3Q07444 240 aa11.61□□□□□ -0.55
GCN1-208ENST00000551549 FAM47AQ5JRC9 791 aa11.61□□□□□ -0.55
GCN1-208ENST00000551549 LNPKQ9C0E8 428 aa11.61□□□□□ -0.55
GCN1-208ENST00000551549 NBPF3Q9H094 633 aa11.61□□□□□ -0.55
GCN1-208ENST00000551549 MROH8Q9H579 483 aa11.61□□□□□ -0.55
GCN1-208ENST00000551549 C11orf49Q9H6J7 331 aa11.61□□□□□ -0.55
GCN1-208ENST00000551549 NYAP2Q9P242 653 aa11.61□□□□□ -0.55
GCN1-208ENST00000551549 PPP1R9AQ9ULJ8 1098 aa11.61□□□□□ -0.55
GCN1-208ENST00000551549 VWA5AO00534 786 aa11.6□□□□□ -0.55
GCN1-208ENST00000551549 IGHDP01880 384 aa11.6□□□□□ -0.55
GCN1-208ENST00000551549 CNGA1P29973 690 aa11.6□□□□□ -0.55
GCN1-208ENST00000551549 FXR1P51114 621 aaKnown RBP eCLIP11.6□□□□□ -0.55
GCN1-208ENST00000551549 PPARAQ07869 468 aa11.6□□□□□ -0.55
GCN1-208ENST00000551549 VPS53Q5VIR6 699 aa11.6□□□□□ -0.55
GCN1-208ENST00000551549 B4GALNT3Q6L9W6 998 aa11.6□□□□□ -0.55
GCN1-208ENST00000551549 REPS2Q8NFH8 660 aa11.6□□□□□ -0.55
GCN1-208ENST00000551549 EXOC6Q8TAG9 804 aa11.6□□□□□ -0.55
GCN1-208ENST00000551549 MKL1Q969V6 931 aa11.6□□□□□ -0.55
GCN1-208ENST00000551549 EVI5LQ96CN4 794 aa11.6□□□□□ -0.55
GCN1-208ENST00000551549 CEP95Q96GE4 821 aa11.6□□□□□ -0.55
GCN1-208ENST00000551549 NAPBQ9H115 298 aa11.6□□□□□ -0.55
GCN1-208ENST00000551549 ZNF287Q9HBT7 754 aa11.6□□□□□ -0.55
GCN1-208ENST00000551549 INCENPQ9NQS7 918 aa11.6□□□□□ -0.55
GCN1-208ENST00000551549 MTMR4Q9NYA4 1195 aa11.6□□□□□ -0.55
GCN1-208ENST00000551549 RBM27Q9P2N5 1060 aaKnown RBP11.6□□□□□ -0.55
GCN1-208ENST00000551549 RLFQ13129 1914 aa11.6□□□□□ -0.55
GCN1-208ENST00000551549 PFASO15067 1338 aa11.6□□□□□ -0.55
GCN1-208ENST00000551549 COL6A3P12111 3177 aa11.59□□□□□ -0.55
GCN1-208ENST00000551549 SLC25A27O95847 323 aa11.59□□□□□ -0.55
GCN1-208ENST00000551549 FCER1AP12319 257 aa11.59□□□□□ -0.55
GCN1-208ENST00000551549 STAT3P40763 770 aa11.59□□□□□ -0.55
GCN1-208ENST00000551549 TFAP4Q01664 338 aa11.59□□□□□ -0.55
GCN1-208ENST00000551549 CTDSPL2Q05D32 466 aa11.59□□□□□ -0.55
GCN1-208ENST00000551549 PRAMEF19Q5SWL8 479 aa11.59□□□□□ -0.55
GCN1-208ENST00000551549 OLFML2BQ68BL8 750 aa11.59□□□□□ -0.55
GCN1-208ENST00000551549 RIOX2Q8IUF8 465 aa11.59□□□□□ -0.55
GCN1-208ENST00000551549 C7orf61Q8IZ16 206 aa11.59□□□□□ -0.55
GCN1-208ENST00000551549 ABRAQ8N0Z2 381 aa11.59□□□□□ -0.55
GCN1-208ENST00000551549 LRRC47Q8N1G4 583 aaKnown RBP11.59□□□□□ -0.55
GCN1-208ENST00000551549 NEDD1Q8NHV4 660 aa11.59□□□□□ -0.55
GCN1-208ENST00000551549 FAM227BQ96M60 508 aa11.59□□□□□ -0.55
GCN1-208ENST00000551549 SLF1Q9BQI6 1058 aa11.59□□□□□ -0.55
GCN1-208ENST00000551549 PRO3102Q9H379 93 aa11.59□□□□□ -0.55
GCN1-208ENST00000551549 RWDD1Q9H446 243 aaPredicted RBP11.59□□□□□ -0.55
GCN1-208ENST00000551549 DDX20Q9UHI6 824 aaKnown RBP11.59□□□□□ -0.55
GCN1-208ENST00000551549 TACC3Q9Y6A5 838 aa11.59□□□□□ -0.55
GCN1-208ENST00000551549 TTLL1O95922 423 aa11.58□□□□□ -0.56
GCN1-208ENST00000551549 PGK2P07205 417 aa11.58□□□□□ -0.56
GCN1-208ENST00000551549 SLC3A2P08195 630 aaKnown RBP11.58□□□□□ -0.56
GCN1-208ENST00000551549 TSPY3P0CV98 308 aa11.58□□□□□ -0.56
GCN1-208ENST00000551549 TSPY8P0CW00 308 aa11.58□□□□□ -0.56
GCN1-208ENST00000551549 COL6A1P12109 1028 aa11.58□□□□□ -0.56
GCN1-208ENST00000551549 CYBAP13498 195 aa11.58□□□□□ -0.56
GCN1-208ENST00000551549 PDE4BQ07343 736 aa11.58□□□□□ -0.56
GCN1-208ENST00000551549 AAMPQ13685 434 aa11.58□□□□□ -0.56
GCN1-208ENST00000551549 SMC5Q8IY18 1101 aa11.58□□□□□ -0.56
GCN1-208ENST00000551549 CHMP4CQ96CF2 233 aa11.58□□□□□ -0.56
GCN1-208ENST00000551549 MAML3Q96JK9 1138 aa11.58□□□□□ -0.56
GCN1-208ENST00000551549 MMP19Q99542 508 aa11.58□□□□□ -0.56
GCN1-208ENST00000551549 HELLSQ9NRZ9 838 aa11.58□□□□□ -0.56
GCN1-208ENST00000551549 ZNF214Q9UL59 606 aaPredicted RBP11.58□□□□□ -0.56
GCN1-208ENST00000551549 MYH8P13535 1937 aa11.58□□□□□ -0.56
GCN1-208ENST00000551549 A0A0D9SFI3 127 aa11.57□□□□□ -0.56
GCN1-208ENST00000551549 ANO1Q5XXA6 986 aa11.57□□□□□ -0.56
GCN1-208ENST00000551549 SLFN13Q68D06 897 aa11.57□□□□□ -0.56
GCN1-208ENST00000551549 CHD1LQ86WJ1 897 aa11.57□□□□□ -0.56
GCN1-208ENST00000551549 PRPF38AQ8NAV1 312 aaKnown RBP11.57□□□□□ -0.56
GCN1-208ENST00000551549 KIFC2Q96AC6 838 aa11.57□□□□□ -0.56
GCN1-208ENST00000551549 SLC5A4Q9NY91 659 aa11.57□□□□□ -0.56
GCN1-208ENST00000551549 PCDH10Q9P2E7 1040 aa11.57□□□□□ -0.56
GCN1-208ENST00000551549 ZMYND8Q9ULU4 1186 aaPredicted RBP11.57□□□□□ -0.56
GCN1-208ENST00000551549 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.57□□□□□ -0.56
GCN1-208ENST00000551549 RIPK3Q9Y572 518 aa11.57□□□□□ -0.56
GCN1-208ENST00000551549 A0A0G2JMZ2 1700 aa11.57□□□□□ -0.56
GCN1-208ENST00000551549 GREB1LQ9C091 1923 aaPredicted RBP11.56□□□□□ -0.56
GCN1-208ENST00000551549 PLIN4Q96Q06 1357 aa11.56□□□□□ -0.56
GCN1-208ENST00000551549 TRIM6-TRIM34B2RNG4 842 aa11.56□□□□□ -0.56
GCN1-208ENST00000551549 NMT2O60551 498 aa11.56□□□□□ -0.56
GCN1-208ENST00000551549 ZBED4O75132 1171 aa11.56□□□□□ -0.56
GCN1-208ENST00000551549 SYN1P17600 705 aa11.56□□□□□ -0.56
GCN1-208ENST00000551549 SLC4A3P48751 1232 aa11.56□□□□□ -0.56
GCN1-208ENST00000551549 NUCB1Q02818 461 aa11.56□□□□□ -0.56
GCN1-208ENST00000551549 NMIQ13287 307 aaPredicted RBP11.56□□□□□ -0.56
GCN1-208ENST00000551549 KCTD2Q14681 263 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms