RNA–Protein interactions for RNA: ENST00000549243.5

SLC48A1-207, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 577 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-207ENST00000549243 SHCBP1Q8NEM2 672 aa23.34■■□□□ 1.33
SLC48A1-207ENST00000549243 NUP88Q99567 741 aaPredicted RBP23.34■■□□□ 1.33
SLC48A1-207ENST00000549243 NACAP1Q9BZK3 213 aa23.34■■□□□ 1.33
SLC48A1-207ENST00000549243 NBPF3Q9H094 633 aa23.34■■□□□ 1.33
SLC48A1-207ENST00000549243 HOXC6P09630 235 aa23.33■■□□□ 1.33
SLC48A1-207ENST00000549243 CYP2C19P33261 490 aa23.33■■□□□ 1.33
SLC48A1-207ENST00000549243 TMEM132BQ14DG7 1078 aa23.33■■□□□ 1.33
SLC48A1-207ENST00000549243 CCDC129Q6ZRS4 1044 aa23.33■■□□□ 1.33
SLC48A1-207ENST00000549243 ZNF444Q8N0Y2 327 aaPredicted RBP23.33■■□□□ 1.33
SLC48A1-207ENST00000549243 NAPBQ9H115 298 aa23.33■■□□□ 1.33
SLC48A1-207ENST00000549243 STRNO43815 780 aa23.32■■□□□ 1.32
SLC48A1-207ENST00000549243 CNGA1P29973 690 aa23.32■■□□□ 1.32
SLC48A1-207ENST00000549243 LHX8Q68G74 356 aa23.32■■□□□ 1.32
SLC48A1-207ENST00000549243 MROH8Q9H579 483 aa23.32■■□□□ 1.32
SLC48A1-207ENST00000549243 C11orf49Q9H6J7 331 aa23.32■■□□□ 1.32
SLC48A1-207ENST00000549243 ZNF287Q9HBT7 754 aa23.32■■□□□ 1.32
SLC48A1-207ENST00000549243 NYAP2Q9P242 653 aa23.32■■□□□ 1.32
SLC48A1-207ENST00000549243 CLIP2Q9UDT6 1046 aa23.32■■□□□ 1.32
SLC48A1-207ENST00000549243 PLXNA1Q9UIW2 1896 aa23.32■■□□□ 1.32
SLC48A1-207ENST00000549243 PDE1AP54750 535 aa23.31■■□□□ 1.32
SLC48A1-207ENST00000549243 PPP1R9AQ9ULJ8 1098 aa23.31■■□□□ 1.32
SLC48A1-207ENST00000549243 F5H6K3 240 aa23.3■■□□□ 1.32
SLC48A1-207ENST00000549243 COBLO75128 1261 aa23.3■■□□□ 1.32
SLC48A1-207ENST00000549243 NDUFB10O96000 172 aa23.3■■□□□ 1.32
SLC48A1-207ENST00000549243 KLRC3Q07444 240 aa23.3■■□□□ 1.32
SLC48A1-207ENST00000549243 C7orf61Q8IZ16 206 aa23.3■■□□□ 1.32
SLC48A1-207ENST00000549243 EVI5LQ96CN4 794 aa23.3■■□□□ 1.32
SLC48A1-207ENST00000549243 LNPKQ9C0E8 428 aa23.3■■□□□ 1.32
SLC48A1-207ENST00000549243 RBM27Q9P2N5 1060 aaKnown RBP23.3■■□□□ 1.32
SLC48A1-207ENST00000549243 STAP2Q9UGK3 403 aa23.3■■□□□ 1.32
SLC48A1-207ENST00000549243 ADAMTS5Q9UNA0 930 aa23.3■■□□□ 1.32
SLC48A1-207ENST00000549243 IGKV6D-41A0A0C4DH26 115 aa23.29■■□□□ 1.32
SLC48A1-207ENST00000549243 VWA5AO00534 786 aa23.29■■□□□ 1.32
SLC48A1-207ENST00000549243 FXR1P51114 621 aaKnown RBP eCLIP23.29■■□□□ 1.32
SLC48A1-207ENST00000549243 PDE4BQ07343 736 aa23.29■■□□□ 1.32
SLC48A1-207ENST00000549243 PPARAQ07869 468 aa23.29■■□□□ 1.32
SLC48A1-207ENST00000549243 FAM47AQ5JRC9 791 aa23.29■■□□□ 1.32
SLC48A1-207ENST00000549243 B4GALNT3Q6L9W6 998 aa23.29■■□□□ 1.32
SLC48A1-207ENST00000549243 TRPV1Q8NER1 839 aa23.29■■□□□ 1.32
SLC48A1-207ENST00000549243 CEP95Q96GE4 821 aa23.29■■□□□ 1.32
SLC48A1-207ENST00000549243 PFASO15067 1338 aa23.29■■□□□ 1.32
SLC48A1-207ENST00000549243 RANBP2P49792 3224 aaKnown RBP23.28■■□□□ 1.32
SLC48A1-207ENST00000549243 SLC25A27O95847 323 aa23.28■■□□□ 1.32
SLC48A1-207ENST00000549243 FCER1AP12319 257 aa23.28■■□□□ 1.32
SLC48A1-207ENST00000549243 SLF1Q9BQI6 1058 aa23.28■■□□□ 1.32
SLC48A1-207ENST00000549243 FOXP2O15409 715 aa23.27■■□□□ 1.32
SLC48A1-207ENST00000549243 SLC3A2P08195 630 aaKnown RBP23.27■■□□□ 1.32
SLC48A1-207ENST00000549243 TSPY3P0CV98 308 aa23.27■■□□□ 1.32
SLC48A1-207ENST00000549243 TSPY8P0CW00 308 aa23.27■■□□□ 1.32
SLC48A1-207ENST00000549243 STAT3P40763 770 aa23.27■■□□□ 1.32
SLC48A1-207ENST00000549243 CTDSPL2Q05D32 466 aa23.27■■□□□ 1.32
SLC48A1-207ENST00000549243 RIOX2Q8IUF8 465 aa23.27■■□□□ 1.32
SLC48A1-207ENST00000549243 LRRC47Q8N1G4 583 aaKnown RBP23.27■■□□□ 1.32
SLC48A1-207ENST00000549243 SLC5A4Q9NY91 659 aa23.27■■□□□ 1.32
SLC48A1-207ENST00000549243 MTMR4Q9NYA4 1195 aa23.27■■□□□ 1.32
SLC48A1-207ENST00000549243 DDX20Q9UHI6 824 aaKnown RBP23.27■■□□□ 1.32
SLC48A1-207ENST00000549243 SMCHD1A6NHR9 2005 aa23.26■■□□□ 1.31
SLC48A1-207ENST00000549243 IGHA2P01877 340 aa23.26■■□□□ 1.31
SLC48A1-207ENST00000549243 PGK2P07205 417 aa23.26■■□□□ 1.31
SLC48A1-207ENST00000549243 CYBAP13498 195 aa23.26■■□□□ 1.31
SLC48A1-207ENST00000549243 TFAP4Q01664 338 aa23.26■■□□□ 1.31
SLC48A1-207ENST00000549243 VPS53Q5VIR6 699 aa23.26■■□□□ 1.31
SLC48A1-207ENST00000549243 OLFML2BQ68BL8 750 aa23.26■■□□□ 1.31
SLC48A1-207ENST00000549243 ABRAQ8N0Z2 381 aa23.26■■□□□ 1.31
SLC48A1-207ENST00000549243 REPS2Q8NFH8 660 aa23.26■■□□□ 1.31
SLC48A1-207ENST00000549243 NEDD1Q8NHV4 660 aa23.26■■□□□ 1.31
SLC48A1-207ENST00000549243 EXOC6Q8TAG9 804 aa23.26■■□□□ 1.31
SLC48A1-207ENST00000549243 MMP19Q99542 508 aa23.26■■□□□ 1.31
SLC48A1-207ENST00000549243 RWDD1Q9H446 243 aaPredicted RBP23.26■■□□□ 1.31
SLC48A1-207ENST00000549243 ZNF214Q9UL59 606 aaPredicted RBP23.26■■□□□ 1.31
SLC48A1-207ENST00000549243 ZMYND8Q9ULU4 1186 aaPredicted RBP23.26■■□□□ 1.31
SLC48A1-207ENST00000549243 TTLL1O95922 423 aa23.25■■□□□ 1.31
SLC48A1-207ENST00000549243 SLC4A3P48751 1232 aa23.25■■□□□ 1.31
SLC48A1-207ENST00000549243 AAMPQ13685 434 aa23.25■■□□□ 1.31
SLC48A1-207ENST00000549243 PRAMEF19Q5SWL8 479 aa23.25■■□□□ 1.31
SLC48A1-207ENST00000549243 CHMP4CQ96CF2 233 aa23.25■■□□□ 1.31
SLC48A1-207ENST00000549243 MAML3Q96JK9 1138 aa23.25■■□□□ 1.31
SLC48A1-207ENST00000549243 INCENPQ9NQS7 918 aa23.25■■□□□ 1.31
SLC48A1-207ENST00000549243 PLIN4Q96Q06 1357 aa23.25■■□□□ 1.31
SLC48A1-207ENST00000549243 COL6A1P12109 1028 aa23.24■■□□□ 1.31
SLC48A1-207ENST00000549243 ANO1Q5XXA6 986 aa23.24■■□□□ 1.31
SLC48A1-207ENST00000549243 MKL1Q969V6 931 aa23.24■■□□□ 1.31
SLC48A1-207ENST00000549243 KIFC2Q96AC6 838 aa23.24■■□□□ 1.31
SLC48A1-207ENST00000549243 FAM227BQ96M60 508 aa23.24■■□□□ 1.31
SLC48A1-207ENST00000549243 ISY1Q9ULR0 285 aaKnown RBP23.24■■□□□ 1.31
SLC48A1-207ENST00000549243 A0A0D9SFI3 127 aa23.23■■□□□ 1.31
SLC48A1-207ENST00000549243 TRIM6-TRIM34B2RNG4 842 aa23.23■■□□□ 1.31
SLC48A1-207ENST00000549243 MSCO60682 206 aa23.23■■□□□ 1.31
SLC48A1-207ENST00000549243 IGHDP01880 384 aa23.23■■□□□ 1.31
SLC48A1-207ENST00000549243 SYN1P17600 705 aa23.23■■□□□ 1.31
SLC48A1-207ENST00000549243 KCTD2Q14681 263 aa23.23■■□□□ 1.31
SLC48A1-207ENST00000549243 SNRNP48Q6IEG0 339 aaKnown RBP23.23■■□□□ 1.31
SLC48A1-207ENST00000549243 SMC5Q8IY18 1101 aa23.23■■□□□ 1.31
SLC48A1-207ENST00000549243 CPXCR1Q8N123 301 aa23.23■■□□□ 1.31
SLC48A1-207ENST00000549243 PRPF38AQ8NAV1 312 aaKnown RBP23.23■■□□□ 1.31
SLC48A1-207ENST00000549243 PRO3102Q9H379 93 aa23.23■■□□□ 1.31
SLC48A1-207ENST00000549243 HELLSQ9NRZ9 838 aa23.23■■□□□ 1.31
SLC48A1-207ENST00000549243 SLFN13Q68D06 897 aa23.22■■□□□ 1.31
SLC48A1-207ENST00000549243 RILPL2Q969X0 211 aa23.22■■□□□ 1.31
SLC48A1-207ENST00000549243 TEX13BQ9BXU2 312 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms