RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 TXKP42681 527 aa15.44■□□□□ 0.06
PRPF40B-209ENST00000548825 RAD9BQ6WBX8 426 aa15.44■□□□□ 0.06
PRPF40B-209ENST00000548825 FAM196AQ6ZSG2 479 aa15.44■□□□□ 0.06
PRPF40B-209ENST00000548825 GPCPD1Q9NPB8 672 aa15.44■□□□□ 0.06
PRPF40B-209ENST00000548825 RBM28Q9NW13 759 aaKnown RBP15.44■□□□□ 0.06
PRPF40B-209ENST00000548825 TRIM10Q9UDY6 481 aa15.44■□□□□ 0.06
PRPF40B-209ENST00000548825 TAF1P21675 1872 aa15.44■□□□□ 0.06
PRPF40B-209ENST00000548825 KIF5CO60282 957 aa15.44■□□□□ 0.06
PRPF40B-209ENST00000548825 SPATA1Q5VX52 437 aa15.44■□□□□ 0.06
PRPF40B-209ENST00000548825 WWC2Q6AWC2 1192 aa15.44■□□□□ 0.06
PRPF40B-209ENST00000548825 AK7Q96M32 723 aa15.44■□□□□ 0.06
PRPF40B-209ENST00000548825 ASIC1P78348 528 aa15.43■□□□□ 0.06
PRPF40B-209ENST00000548825 MAPK8IP2Q13387 824 aaPredicted RBP15.43■□□□□ 0.06
PRPF40B-209ENST00000548825 TSR1Q2NL82 804 aaKnown RBP15.43■□□□□ 0.06
PRPF40B-209ENST00000548825 PSMB7Q99436 277 aa15.43■□□□□ 0.06
PRPF40B-209ENST00000548825 DDX41Q9UJV9 622 aaKnown RBP15.43■□□□□ 0.06
PRPF40B-209ENST00000548825 ADAMTS7Q9UKP4 1686 aa15.43■□□□□ 0.06
PRPF40B-209ENST00000548825 PAK1Q13153 545 aa15.43■□□□□ 0.06
PRPF40B-209ENST00000548825 KRT31Q15323 416 aa15.43■□□□□ 0.06
PRPF40B-209ENST00000548825 MEX3CQ5U5Q3 659 aaKnown RBP15.43■□□□□ 0.06
PRPF40B-209ENST00000548825 TEX11Q8IYF3 940 aa15.43■□□□□ 0.06
PRPF40B-209ENST00000548825 SRRTQ9BXP5 876 aaKnown RBP15.43■□□□□ 0.06
PRPF40B-209ENST00000548825 CNTNAP5Q8WYK1 1306 aa15.43■□□□□ 0.06
PRPF40B-209ENST00000548825 KLRF2D3W0D1 207 aa15.43■□□□□ 0.06
PRPF40B-209ENST00000548825 CALM1P0DP23 149 aa15.43■□□□□ 0.06
PRPF40B-209ENST00000548825 CALM2P0DP24 149 aa15.43■□□□□ 0.06
PRPF40B-209ENST00000548825 CALM3P0DP25 149 aa15.43■□□□□ 0.06
PRPF40B-209ENST00000548825 SOGA3Q5TF21 947 aa15.43■□□□□ 0.06
PRPF40B-209ENST00000548825 TRIM65Q6PJ69 517 aa15.43■□□□□ 0.06
PRPF40B-209ENST00000548825 TICAM2Q86XR7 235 aa15.43■□□□□ 0.06
PRPF40B-209ENST00000548825 CNBD1Q8NA66 436 aa15.43■□□□□ 0.06
PRPF40B-209ENST00000548825 MYH2Q9UKX2 1941 aa15.42■□□□□ 0.06
PRPF40B-209ENST00000548825 XDHP47989 1333 aa15.42■□□□□ 0.06
PRPF40B-209ENST00000548825 PRCPP42785 496 aa15.42■□□□□ 0.06
PRPF40B-209ENST00000548825 SCNN1DP51172 638 aa15.42■□□□□ 0.06
PRPF40B-209ENST00000548825 MRPS25P82663 173 aaKnown RBP15.42■□□□□ 0.06
PRPF40B-209ENST00000548825 FEZ1Q99689 392 aa15.42■□□□□ 0.06
PRPF40B-209ENST00000548825 ZNF446Q9NWS9 450 aa15.42■□□□□ 0.06
PRPF40B-209ENST00000548825 AKAP11Q9UKA4 1901 aa15.42■□□□□ 0.06
PRPF40B-209ENST00000548825 IL17AQ16552 155 aa15.42■□□□□ 0.06
PRPF40B-209ENST00000548825 MXD3Q9BW11 206 aa15.42■□□□□ 0.06
PRPF40B-209ENST00000548825 PLEKHA4Q9H4M7 779 aa15.42■□□□□ 0.06
PRPF40B-209ENST00000548825 MAGEC2Q9UBF1 373 aaPredicted RBP15.42■□□□□ 0.06
PRPF40B-209ENST00000548825 PKD1L3Q7Z443 1732 aa15.42■□□□□ 0.06
PRPF40B-209ENST00000548825 GLI3P10071 1580 aa15.42■□□□□ 0.06
PRPF40B-209ENST00000548825 KCNJ18B7U540 433 aa15.42■□□□□ 0.06
PRPF40B-209ENST00000548825 BTDP43251 543 aa15.42■□□□□ 0.06
PRPF40B-209ENST00000548825 KCNJ12Q14500 433 aa15.42■□□□□ 0.06
PRPF40B-209ENST00000548825 FERMT2Q96AC1 680 aa15.42■□□□□ 0.06
PRPF40B-209ENST00000548825 COA7Q96BR5 231 aa15.42■□□□□ 0.06
PRPF40B-209ENST00000548825 BRIP1Q9BX63 1249 aa15.42■□□□□ 0.06
PRPF40B-209ENST00000548825 TANGO6Q9C0B7 1094 aa15.42■□□□□ 0.06
PRPF40B-209ENST00000548825 TBC1D7Q9P0N9 293 aa15.42■□□□□ 0.06
PRPF40B-209ENST00000548825 RNF225M0QZC1 329 aaPredicted RBP15.41■□□□□ 0.06
PRPF40B-209ENST00000548825 RPN1P04843 607 aaKnown RBP15.41■□□□□ 0.06
PRPF40B-209ENST00000548825 TRIM21P19474 475 aaKnown RBP15.41■□□□□ 0.06
PRPF40B-209ENST00000548825 MFSD14BQ5SR56 506 aa15.41■□□□□ 0.06
PRPF40B-209ENST00000548825 CHP1Q99653 195 aa15.41■□□□□ 0.06
PRPF40B-209ENST00000548825 POLD4Q9HCU8 107 aa15.41■□□□□ 0.06
PRPF40B-209ENST00000548825 IL17RBQ9NRM6 502 aa15.41■□□□□ 0.06
PRPF40B-209ENST00000548825 TMEM260Q9NX78 707 aa15.41■□□□□ 0.06
PRPF40B-209ENST00000548825 COL1A1P02452 1464 aaPredicted RBP15.41■□□□□ 0.06
PRPF40B-209ENST00000548825 BAZ2AQ9UIF9 1905 aaKnown RBP15.41■□□□□ 0.06
PRPF40B-209ENST00000548825 FAM196BA6NMK8 535 aa15.41■□□□□ 0.06
PRPF40B-209ENST00000548825 BAG3O95817 575 aa15.41■□□□□ 0.06
PRPF40B-209ENST00000548825 MTIF2P46199 727 aaKnown RBP15.41■□□□□ 0.06
PRPF40B-209ENST00000548825 TNNI2P48788 182 aa15.41■□□□□ 0.06
PRPF40B-209ENST00000548825 PPARDQ03181 441 aa15.41■□□□□ 0.06
PRPF40B-209ENST00000548825 SLC35F6Q8N357 371 aa15.41■□□□□ 0.06
PRPF40B-209ENST00000548825 SEC63Q9UGP8 760 aaKnown RBP15.41■□□□□ 0.06
PRPF40B-209ENST00000548825 PARP3Q9Y6F1 533 aa15.41■□□□□ 0.06
PRPF40B-209ENST00000548825 DMTNQ08495 405 aa15.4■□□□□ 0.06
PRPF40B-209ENST00000548825 FUT2Q10981 343 aa15.4■□□□□ 0.06
PRPF40B-209ENST00000548825 TRAPPC3LQ5T215 181 aa15.4■□□□□ 0.06
PRPF40B-209ENST00000548825 TRMT1LQ7Z2T5 733 aaKnown RBP15.4■□□□□ 0.06
PRPF40B-209ENST00000548825 EYA3Q99504 573 aa15.4■□□□□ 0.06
PRPF40B-209ENST00000548825 UBAP1LF5GYI3 381 aa15.4■□□□□ 0.06
PRPF40B-209ENST00000548825 STX10O60499 249 aa15.4■□□□□ 0.06
PRPF40B-209ENST00000548825 ZMYND10O75800 440 aa15.4■□□□□ 0.06
PRPF40B-209ENST00000548825 SLC16A2P36021 539 aa15.4■□□□□ 0.06
PRPF40B-209ENST00000548825 MATR3P43243 847 aaKnown RBP eCLIP15.4■□□□□ 0.06
PRPF40B-209ENST00000548825 RBM5P52756 815 aaKnown RBP eCLIP15.4■□□□□ 0.06
PRPF40B-209ENST00000548825 PMS1P54277 932 aaKnown RBP15.4■□□□□ 0.06
PRPF40B-209ENST00000548825 NAP1L1P55209 391 aaKnown RBP15.4■□□□□ 0.06
PRPF40B-209ENST00000548825 GTF2IP78347 998 aa15.4■□□□□ 0.06
PRPF40B-209ENST00000548825 FBXO33Q7Z6M2 555 aa15.4■□□□□ 0.06
PRPF40B-209ENST00000548825 KLHL34Q8N239 644 aa15.4■□□□□ 0.06
PRPF40B-209ENST00000548825 CDK5RAP3Q96JB5 506 aa15.4■□□□□ 0.06
PRPF40B-209ENST00000548825 MTRQ99707 1265 aa15.4■□□□□ 0.06
PRPF40B-209ENST00000548825 SLC39A2Q9NP94 309 aa15.4■□□□□ 0.06
PRPF40B-209ENST00000548825 MACROD2A1Z1Q3 448 aa15.4■□□□□ 0.06
PRPF40B-209ENST00000548825 SMCO2A6NFE2 343 aa15.4■□□□□ 0.06
PRPF40B-209ENST00000548825 B4DLN1 442 aa15.4■□□□□ 0.06
PRPF40B-209ENST00000548825 PPP1R3GB7ZBB8 358 aa15.4■□□□□ 0.06
PRPF40B-209ENST00000548825 KLK7P49862 253 aa15.4■□□□□ 0.06
PRPF40B-209ENST00000548825 CACNB3P54284 484 aa15.4■□□□□ 0.06
PRPF40B-209ENST00000548825 FAM193AP78312 1265 aa15.4■□□□□ 0.06
PRPF40B-209ENST00000548825 PDE4DQ08499 809 aa15.4■□□□□ 0.06
PRPF40B-209ENST00000548825 IKQ13123 557 aaPredicted RBP15.4■□□□□ 0.06
PRPF40B-209ENST00000548825 NR1I3Q14994 352 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms