RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 CEP131Q9UPN4 1083 aa13.04□□□□□ -0.32
DDB1-224ENST00000545894 SRPRBQ9Y5M8 271 aaKnown RBP13.04□□□□□ -0.32
DDB1-224ENST00000545894 DUOX1Q9NRD9 1551 aa13.03□□□□□ -0.32
DDB1-224ENST00000545894 NFKBIEO00221 500 aa13.03□□□□□ -0.32
DDB1-224ENST00000545894 ACTN4O43707 911 aaKnown RBP13.03□□□□□ -0.32
DDB1-224ENST00000545894 TXLNAP40222 546 aa13.03□□□□□ -0.32
DDB1-224ENST00000545894 HNRNPH2P55795 449 aaKnown RBP13.03□□□□□ -0.32
DDB1-224ENST00000545894 CTDSPL2Q05D32 466 aa13.03□□□□□ -0.32
DDB1-224ENST00000545894 GRAMD1CQ8IYS0 662 aa13.03□□□□□ -0.32
DDB1-224ENST00000545894 SPATA20Q8TB22 786 aa13.03□□□□□ -0.32
DDB1-224ENST00000545894 LPIN2Q92539 896 aa13.03□□□□□ -0.32
DDB1-224ENST00000545894 KRT23Q9C075 422 aa13.03□□□□□ -0.32
DDB1-224ENST00000545894 EPB41L4AQ9HCS5 686 aaPredicted RBP13.03□□□□□ -0.32
DDB1-224ENST00000545894 IRS2Q9Y4H2 1338 aa13.03□□□□□ -0.32
DDB1-224ENST00000545894 LTBP1Q14766 1721 aa13.03□□□□□ -0.32
DDB1-224ENST00000545894 PHKA1P46020 1223 aa13.02□□□□□ -0.32
DDB1-224ENST00000545894 GPR162Q16538 588 aa13.02□□□□□ -0.32
DDB1-224ENST00000545894 RTN1Q16799 776 aa13.02□□□□□ -0.32
DDB1-224ENST00000545894 CT47A1Q5JQC4 288 aaPredicted RBP13.02□□□□□ -0.32
DDB1-224ENST00000545894 AKNAD1Q5T1N1 836 aa13.02□□□□□ -0.32
DDB1-224ENST00000545894 TXNRD3Q86VQ6 643 aa13.02□□□□□ -0.32
DDB1-224ENST00000545894 PSMD1Q99460 953 aa13.02□□□□□ -0.32
DDB1-224ENST00000545894 NAA15Q9BXJ9 866 aaKnown RBP13.02□□□□□ -0.32
DDB1-224ENST00000545894 FUT8Q9BYC5 575 aa13.02□□□□□ -0.32
DDB1-224ENST00000545894 MRPL44Q9H9J2 332 aaKnown RBP13.02□□□□□ -0.32
DDB1-224ENST00000545894 PCDHB6Q9Y5E3 794 aa13.02□□□□□ -0.32
DDB1-224ENST00000545894 A0A1B0GUL6 1792 aa13.02□□□□□ -0.33
DDB1-224ENST00000545894 DEXIO95424 95 aa13.02□□□□□ -0.33
DDB1-224ENST00000545894 RASSF7Q02833 373 aa13.02□□□□□ -0.33
DDB1-224ENST00000545894 GPS2Q13227 327 aa13.02□□□□□ -0.33
DDB1-224ENST00000545894 MTF1Q14872 753 aa13.02□□□□□ -0.33
DDB1-224ENST00000545894 ARHGAP27Q6ZUM4 889 aa13.02□□□□□ -0.33
DDB1-224ENST00000545894 CCDC34Q96HJ3 373 aa13.02□□□□□ -0.33
DDB1-224ENST00000545894 CCDC151A5D8V7 595 aa13.01□□□□□ -0.33
DDB1-224ENST00000545894 SOWAHDA6NJG2 315 aa13.01□□□□□ -0.33
DDB1-224ENST00000545894 RIMBP2O15034 1052 aa13.01□□□□□ -0.33
DDB1-224ENST00000545894 SLC5A1P13866 664 aa13.01□□□□□ -0.33
DDB1-224ENST00000545894 SART3Q15020 963 aaKnown RBP13.01□□□□□ -0.33
DDB1-224ENST00000545894 BRD3Q15059 726 aa13.01□□□□□ -0.33
DDB1-224ENST00000545894 MFSD6Q6ZSS7 791 aa13.01□□□□□ -0.33
DDB1-224ENST00000545894 PPFIBP1Q86W92 1011 aa13.01□□□□□ -0.33
DDB1-224ENST00000545894 ZNF277Q9NRM2 450 aaPredicted RBP13.01□□□□□ -0.33
DDB1-224ENST00000545894 CCDC196A0A1B0GTZ2 297 aa13.01□□□□□ -0.33
DDB1-224ENST00000545894 MBD4O95243 580 aa13.01□□□□□ -0.33
DDB1-224ENST00000545894 PRELPP51888 382 aa13.01□□□□□ -0.33
DDB1-224ENST00000545894 IRX5P78411 483 aaPredicted RBP13.01□□□□□ -0.33
DDB1-224ENST00000545894 NR5A1Q13285 461 aa13.01□□□□□ -0.33
DDB1-224ENST00000545894 WTAPQ15007 396 aa13.01□□□□□ -0.33
DDB1-224ENST00000545894 SPATA1Q5VX52 437 aa13.01□□□□□ -0.33
DDB1-224ENST00000545894 APTXQ7Z2E3 356 aaKnown RBP13.01□□□□□ -0.33
DDB1-224ENST00000545894 SRGAP1Q7Z6B7 1085 aa13.01□□□□□ -0.33
DDB1-224ENST00000545894 CRACR2BQ8N4Y2 399 aaPredicted RBP13.01□□□□□ -0.33
DDB1-224ENST00000545894 NEK11Q8NG66 645 aa13.01□□□□□ -0.33
DDB1-224ENST00000545894 CSRNP2Q9H175 543 aa13.01□□□□□ -0.33
DDB1-224ENST00000545894 ZCCHC17Q9NP64 241 aaKnown RBP13.01□□□□□ -0.33
DDB1-224ENST00000545894 ADGRG1Q9Y653 693 aa13.01□□□□□ -0.33
DDB1-224ENST00000545894 TACC3Q9Y6A5 838 aa13.01□□□□□ -0.33
DDB1-224ENST00000545894 ARFGEF1Q9Y6D6 1849 aa13□□□□□ -0.33
DDB1-224ENST00000545894 TULP2O00295 520 aa13□□□□□ -0.33
DDB1-224ENST00000545894 TEX33O43247 280 aa13□□□□□ -0.33
DDB1-224ENST00000545894 KIF5CO60282 957 aa13□□□□□ -0.33
DDB1-224ENST00000545894 GYG1P46976 350 aa13□□□□□ -0.33
DDB1-224ENST00000545894 BCAMP50895 628 aa13□□□□□ -0.33
DDB1-224ENST00000545894 CHMP4BP1P59074 171 aa13□□□□□ -0.33
DDB1-224ENST00000545894 LONRF2Q1L5Z9 754 aa13□□□□□ -0.33
DDB1-224ENST00000545894 RAD9BQ6WBX8 426 aa13□□□□□ -0.33
DDB1-224ENST00000545894 C15orf52Q6ZUT6 534 aaKnown RBP13□□□□□ -0.33
DDB1-224ENST00000545894 IGSF22Q8N9C0 903 aa13□□□□□ -0.33
DDB1-224ENST00000545894 SUPT20HQ8NEM7 779 aa13□□□□□ -0.33
DDB1-224ENST00000545894 FAM84BQ96KN1 310 aaPredicted RBP13□□□□□ -0.33
DDB1-224ENST00000545894 IRX2Q9BZI1 471 aaPredicted RBP13□□□□□ -0.33
DDB1-224ENST00000545894 TAOK3Q9H2K8 898 aa13□□□□□ -0.33
DDB1-224ENST00000545894 LZTFL1Q9NQ48 299 aa13□□□□□ -0.33
DDB1-224ENST00000545894 SYNRGQ9UMZ2 1314 aa13□□□□□ -0.33
DDB1-224ENST00000545894 A0A0U1RQG5 324 aaPredicted RBP13□□□□□ -0.33
DDB1-224ENST00000545894 ERICH2A1L162 156 aa13□□□□□ -0.33
DDB1-224ENST00000545894 ATP2B1P20020 1258 aa13□□□□□ -0.33
DDB1-224ENST00000545894 RBL2Q08999 1139 aa13□□□□□ -0.33
DDB1-224ENST00000545894 MAP3K12Q12852 859 aa13□□□□□ -0.33
DDB1-224ENST00000545894 AOC3Q16853 763 aa13□□□□□ -0.33
DDB1-224ENST00000545894 RRP12Q5JTH9 1297 aaKnown RBP13□□□□□ -0.33
DDB1-224ENST00000545894 USP49Q70CQ1 688 aa13□□□□□ -0.33
DDB1-224ENST00000545894 TMTC2Q8N394 836 aa13□□□□□ -0.33
DDB1-224ENST00000545894 MAGEB6Q8N7X4 407 aa13□□□□□ -0.33
DDB1-224ENST00000545894 CEP112Q8N8E3 955 aa13□□□□□ -0.33
DDB1-224ENST00000545894 SPATA5Q8NB90 893 aa13□□□□□ -0.33
DDB1-224ENST00000545894 STAG1Q8WVM7 1258 aa13□□□□□ -0.33
DDB1-224ENST00000545894 EYA3Q99504 573 aa13□□□□□ -0.33
DDB1-224ENST00000545894 MTA3Q9BTC8 594 aa13□□□□□ -0.33
DDB1-224ENST00000545894 ARMT1Q9H993 441 aa13□□□□□ -0.33
DDB1-224ENST00000545894 AATFQ9NY61 560 aaKnown RBP eCLIP13□□□□□ -0.33
DDB1-224ENST00000545894 LTBP3Q9NS15 1303 aa12.99□□□□□ -0.33
DDB1-224ENST00000545894 GSG1L2A8MUP6 293 aa12.99□□□□□ -0.33
DDB1-224ENST00000545894 POTEB2H3BUK9 544 aa12.99□□□□□ -0.33
DDB1-224ENST00000545894 ZBTB22O15209 634 aa12.99□□□□□ -0.33
DDB1-224ENST00000545894 PBX1P40424 430 aa12.99□□□□□ -0.33
DDB1-224ENST00000545894 RCAN1P53805 252 aa12.99□□□□□ -0.33
DDB1-224ENST00000545894 TUBB2AQ13885 445 aa12.99□□□□□ -0.33
DDB1-224ENST00000545894 FBXO33Q7Z6M2 555 aa12.99□□□□□ -0.33
DDB1-224ENST00000545894 CCDC82Q8N4S0 544 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms