RNA–Protein interactions for RNA: ENST00000544658.5

CDK2AP1-206, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 2 BASIC

Gene CDK2AP1, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-206ENST00000544658 BRF1Q92994 677 aa11.1□□□□□ -0.63
CDK2AP1-206ENST00000544658 ZNF287Q9HBT7 754 aa11.1□□□□□ -0.63
CDK2AP1-206ENST00000544658 FAM217BQ9NTX9 383 aaPredicted RBP11.1□□□□□ -0.63
CDK2AP1-206ENST00000544658 TPCN1Q9ULQ1 816 aa11.1□□□□□ -0.63
CDK2AP1-206ENST00000544658 HPS5Q9UPZ3 1129 aa11.1□□□□□ -0.63
CDK2AP1-206ENST00000544658 CYP46A1Q9Y6A2 500 aa11.1□□□□□ -0.63
CDK2AP1-206ENST00000544658 A0A0G2JLL6 359 aaPredicted RBP11.09□□□□□ -0.63
CDK2AP1-206ENST00000544658 F5H6K3 240 aa11.09□□□□□ -0.63
CDK2AP1-206ENST00000544658 GOLGA8HP0CJ92 632 aa11.09□□□□□ -0.63
CDK2AP1-206ENST00000544658 CHRM1P11229 460 aaPredicted RBP11.09□□□□□ -0.63
CDK2AP1-206ENST00000544658 TOP1P11387 765 aaKnown RBP11.09□□□□□ -0.63
CDK2AP1-206ENST00000544658 PSMA5P28066 241 aa11.09□□□□□ -0.63
CDK2AP1-206ENST00000544658 VEGFBP49765 207 aa11.09□□□□□ -0.63
CDK2AP1-206ENST00000544658 KLRC3Q07444 240 aa11.09□□□□□ -0.63
CDK2AP1-206ENST00000544658 TROAPQ12815 778 aa11.09□□□□□ -0.63
CDK2AP1-206ENST00000544658 WTAPQ15007 396 aa11.09□□□□□ -0.63
CDK2AP1-206ENST00000544658 DEFB115Q30KQ5 88 aa11.09□□□□□ -0.63
CDK2AP1-206ENST00000544658 USP17L2Q6R6M4 530 aa11.09□□□□□ -0.63
CDK2AP1-206ENST00000544658 PRRT2Q7Z6L0 340 aaPredicted RBP11.09□□□□□ -0.63
CDK2AP1-206ENST00000544658 NBPF11Q86T75 865 aa11.09□□□□□ -0.63
CDK2AP1-206ENST00000544658 DGKHQ86XP1 1220 aa11.09□□□□□ -0.63
CDK2AP1-206ENST00000544658 CCDC144CPQ8IYA2 1237 aa11.09□□□□□ -0.63
CDK2AP1-206ENST00000544658 STAG2Q8N3U4 1231 aa11.09□□□□□ -0.63
CDK2AP1-206ENST00000544658 DNAJC5GQ8N7S2 189 aa11.09□□□□□ -0.63
CDK2AP1-206ENST00000544658 UBAC1Q9BSL1 405 aa11.09□□□□□ -0.63
CDK2AP1-206ENST00000544658 KIAA1683Q9H0B3 1180 aa11.09□□□□□ -0.63
CDK2AP1-206ENST00000544658 GINM1Q9NU53 330 aa11.09□□□□□ -0.63
CDK2AP1-206ENST00000544658 FRMPD2Q68DX3 1309 aaPredicted RBP11.09□□□□□ -0.63
CDK2AP1-206ENST00000544658 WDR19Q8NEZ3 1342 aa11.09□□□□□ -0.63
CDK2AP1-206ENST00000544658 PCNTO95613 3336 aa11.08□□□□□ -0.64
CDK2AP1-206ENST00000544658 UNCXA6NJT0 531 aa11.08□□□□□ -0.64
CDK2AP1-206ENST00000544658 USP17L10C9JJH3 530 aa11.08□□□□□ -0.64
CDK2AP1-206ENST00000544658 IGF2BP3O00425 579 aaKnown RBP eCLIP11.08□□□□□ -0.642e-8■■■■□ 25.1
CDK2AP1-206ENST00000544658 PPFIA3O75145 1194 aa11.08□□□□□ -0.64
CDK2AP1-206ENST00000544658 TAL1P17542 331 aaPredicted RBP11.08□□□□□ -0.64
CDK2AP1-206ENST00000544658 CDC27P30260 824 aa11.08□□□□□ -0.64
CDK2AP1-206ENST00000544658 LIFRP42702 1097 aa11.08□□□□□ -0.64
CDK2AP1-206ENST00000544658 KIF23Q02241 960 aaPredicted RBP11.08□□□□□ -0.64
CDK2AP1-206ENST00000544658 SH3D19Q5HYK7 790 aa11.08□□□□□ -0.64
CDK2AP1-206ENST00000544658 FAM83BQ5T0W9 1011 aa11.08□□□□□ -0.64
CDK2AP1-206ENST00000544658 IFIT1BQ5T764 474 aaKnown RBP11.08□□□□□ -0.64
CDK2AP1-206ENST00000544658 SLFN13Q68D06 897 aa11.08□□□□□ -0.64
CDK2AP1-206ENST00000544658 KCTD1Q719H9 257 aa11.08□□□□□ -0.64
CDK2AP1-206ENST00000544658 SGMS1Q86VZ5 419 aa11.08□□□□□ -0.64
CDK2AP1-206ENST00000544658 IQCA1Q86XH1 822 aa11.08□□□□□ -0.64
CDK2AP1-206ENST00000544658 ZNF654Q8IZM8 581 aa11.08□□□□□ -0.64
CDK2AP1-206ENST00000544658 CMTR1Q8N1G2 835 aaKnown RBP11.08□□□□□ -0.64
CDK2AP1-206ENST00000544658 FAM43AQ8N2R8 423 aa11.08□□□□□ -0.64
CDK2AP1-206ENST00000544658 FBXL16Q8N461 479 aa11.08□□□□□ -0.64
CDK2AP1-206ENST00000544658 PNMA1Q8ND90 353 aa11.08□□□□□ -0.64
CDK2AP1-206ENST00000544658 TMEM87BQ96K49 555 aa11.08□□□□□ -0.64
CDK2AP1-206ENST00000544658 CAPNS2Q96L46 248 aa11.08□□□□□ -0.64
CDK2AP1-206ENST00000544658 ALDH8A1Q9H2A2 487 aaPredicted RBP11.08□□□□□ -0.64
CDK2AP1-206ENST00000544658 VCPKMTQ9H867 229 aa11.08□□□□□ -0.64
CDK2AP1-206ENST00000544658 UPF2Q9HAU5 1272 aaKnown RBP11.08□□□□□ -0.64
CDK2AP1-206ENST00000544658 TSHZ2Q9NRE2 1034 aa11.08□□□□□ -0.64
CDK2AP1-206ENST00000544658 FBXO28Q9NVF7 368 aa11.08□□□□□ -0.64
CDK2AP1-206ENST00000544658 CCL15-CCL14A0A0B4J2E2 113 aa11.07□□□□□ -0.64
CDK2AP1-206ENST00000544658 KLF18A0A0U1RQI7 1052 aa11.07□□□□□ -0.64
CDK2AP1-206ENST00000544658 BTBD19C9JJ37 291 aa11.07□□□□□ -0.64
CDK2AP1-206ENST00000544658 CXCL11O14625 94 aa11.07□□□□□ -0.64
CDK2AP1-206ENST00000544658 RAD21O60216 631 aa11.07□□□□□ -0.64
CDK2AP1-206ENST00000544658 HMGB1P09429 215 aaKnown RBP11.07□□□□□ -0.64
CDK2AP1-206ENST00000544658 SNHG28P0DPA3 235 aa11.07□□□□□ -0.64
CDK2AP1-206ENST00000544658 PDHBP11177 359 aa11.07□□□□□ -0.64
CDK2AP1-206ENST00000544658 VCAM1P19320 739 aa11.07□□□□□ -0.64
CDK2AP1-206ENST00000544658 PDIA3P30101 505 aaKnown RBP11.07□□□□□ -0.64
CDK2AP1-206ENST00000544658 EVCP57679 992 aa11.07□□□□□ -0.64
CDK2AP1-206ENST00000544658 SNAP25P60880 206 aa11.07□□□□□ -0.64
CDK2AP1-206ENST00000544658 RABEP1Q15276 862 aa11.07□□□□□ -0.64
CDK2AP1-206ENST00000544658 CCL15Q16663 113 aa11.07□□□□□ -0.64
CDK2AP1-206ENST00000544658 ME3Q16798 604 aa11.07□□□□□ -0.64
CDK2AP1-206ENST00000544658 APOA5Q6Q788 366 aa11.07□□□□□ -0.64
CDK2AP1-206ENST00000544658 GADL1Q6ZQY3 521 aa11.07□□□□□ -0.64
CDK2AP1-206ENST00000544658 PAXIP1Q6ZW49 1069 aaPredicted RBP11.07□□□□□ -0.64
CDK2AP1-206ENST00000544658 NECAB1Q8N987 351 aa11.07□□□□□ -0.64
CDK2AP1-206ENST00000544658 HHIPL1Q96JK4 782 aa11.07□□□□□ -0.64
CDK2AP1-206ENST00000544658 FEZ1Q99689 392 aa11.07□□□□□ -0.64
CDK2AP1-206ENST00000544658 R3HDMLQ9H3Y0 253 aa11.07□□□□□ -0.64
CDK2AP1-206ENST00000544658 NCOA5Q9HCD5 579 aaKnown RBP11.07□□□□□ -0.64
CDK2AP1-206ENST00000544658 ARHGEF10LQ9HCE6 1279 aa11.07□□□□□ -0.64
CDK2AP1-206ENST00000544658 GPCPD1Q9NPB8 672 aa11.07□□□□□ -0.64
CDK2AP1-206ENST00000544658 MAD2L2Q9UI95 211 aa11.07□□□□□ -0.64
CDK2AP1-206ENST00000544658 COL11A1P12107 1806 aaPredicted RBP11.07□□□□□ -0.64
CDK2AP1-206ENST00000544658 TESPA1A2RU30 521 aaPredicted RBP11.06□□□□□ -0.64
CDK2AP1-206ENST00000544658 EIF5BO60841 1220 aaKnown RBP11.06□□□□□ -0.64
CDK2AP1-206ENST00000544658 PLEKHA8P1O95397 391 aa11.06□□□□□ -0.64
CDK2AP1-206ENST00000544658 SLC16A2P36021 539 aa11.06□□□□□ -0.64
CDK2AP1-206ENST00000544658 CCT2P78371 535 aaKnown RBP11.06□□□□□ -0.64
CDK2AP1-206ENST00000544658 STK3Q13188 491 aa11.06□□□□□ -0.64
CDK2AP1-206ENST00000544658 IFNLR1Q8IU57 520 aaPredicted RBP11.06□□□□□ -0.64
CDK2AP1-206ENST00000544658 GMCL1P1Q8NEA9 526 aa11.06□□□□□ -0.64
CDK2AP1-206ENST00000544658 NUP133Q8WUM0 1156 aa11.06□□□□□ -0.64
CDK2AP1-206ENST00000544658 C12orf42Q96LP6 360 aa11.06□□□□□ -0.64
CDK2AP1-206ENST00000544658 MTA3Q9BTC8 594 aa11.06□□□□□ -0.64
CDK2AP1-206ENST00000544658 UBA5Q9GZZ9 404 aa11.06□□□□□ -0.64
CDK2AP1-206ENST00000544658 RPAP3Q9H6T3 665 aaPredicted RBP11.06□□□□□ -0.64
CDK2AP1-206ENST00000544658 KAT14Q9H8E8 782 aa11.06□□□□□ -0.64
CDK2AP1-206ENST00000544658 AS3MTQ9HBK9 375 aa11.06□□□□□ -0.64
CDK2AP1-206ENST00000544658 WDR33Q9C0J8 1336 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms