RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, humanhuman

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-205ENST00000544506 KIAA1211LQ6NV74 962 aa8.22□□□□□ -1.09
LEMD3-205ENST00000544506 MICAL1Q8TDZ2 1067 aa8.22□□□□□ -1.09
LEMD3-205ENST00000544506 ASB11Q8WXH4 323 aa8.22□□□□□ -1.09
LEMD3-205ENST00000544506 DRC1Q96MC2 740 aa8.22□□□□□ -1.09
LEMD3-205ENST00000544506 HAUS7Q99871 368 aa8.22□□□□□ -1.09
LEMD3-205ENST00000544506 ATP13A1Q9HD20 1204 aa8.22□□□□□ -1.09
LEMD3-205ENST00000544506 GPATCH2Q9NW75 528 aa8.22□□□□□ -1.09
LEMD3-205ENST00000544506 FBXL21Q9UKT6 434 aa8.22□□□□□ -1.09
LEMD3-205ENST00000544506 ANGEL1Q9UNK9 670 aaKnown RBP8.22□□□□□ -1.09
LEMD3-205ENST00000544506 CBFA2T2O43439 604 aa8.21□□□□□ -1.1
LEMD3-205ENST00000544506 RAB33AQ14088 237 aa8.21□□□□□ -1.1
LEMD3-205ENST00000544506 FXNQ16595 210 aa8.21□□□□□ -1.1
LEMD3-205ENST00000544506 CLEC16AQ2KHT3 1053 aa8.21□□□□□ -1.1
LEMD3-205ENST00000544506 ANKRD39Q53RE8 183 aa8.21□□□□□ -1.1
LEMD3-205ENST00000544506 SPRED2Q7Z698 418 aa8.21□□□□□ -1.1
LEMD3-205ENST00000544506 FAM178BQ8IXR5 827 aa8.21□□□□□ -1.1
LEMD3-205ENST00000544506 FLCNQ8NFG4 579 aa8.21□□□□□ -1.1
LEMD3-205ENST00000544506 HIRIP3Q9BW71 556 aaPredicted RBP8.21□□□□□ -1.1
LEMD3-205ENST00000544506 HDAC8Q9BY41 377 aa8.21□□□□□ -1.1
LEMD3-205ENST00000544506 ASCC2Q9H1I8 757 aaPredicted RBP8.21□□□□□ -1.1
LEMD3-205ENST00000544506 GFOD1Q9NXC2 390 aa8.21□□□□□ -1.1
LEMD3-205ENST00000544506 SIGLEC6O43699 453 aa8.2□□□□□ -1.1
LEMD3-205ENST00000544506 DDAH1O94760 285 aa8.2□□□□□ -1.1
LEMD3-205ENST00000544506 PRAMEF1O95521 474 aa8.2□□□□□ -1.1
LEMD3-205ENST00000544506 CD8BP10966 210 aa8.2□□□□□ -1.1
LEMD3-205ENST00000544506 TPP2P29144 1249 aaPredicted RBP8.2□□□□□ -1.1
LEMD3-205ENST00000544506 IKZF1Q13422 519 aa8.2□□□□□ -1.1
LEMD3-205ENST00000544506 NCAPHQ15003 741 aa8.2□□□□□ -1.1
LEMD3-205ENST00000544506 TSPYL5Q86VY4 417 aaPredicted RBP8.2□□□□□ -1.1
LEMD3-205ENST00000544506 TRIM55Q9BYV6 548 aa8.2□□□□□ -1.1
LEMD3-205ENST00000544506 GP6Q9HCN6 339 aa8.2□□□□□ -1.1
LEMD3-205ENST00000544506 ST7Q9NRC1 585 aa8.2□□□□□ -1.1
LEMD3-205ENST00000544506 MINPP1Q9UNW1 487 aa8.2□□□□□ -1.1
LEMD3-205ENST00000544506 ZNF451Q9Y4E5 1061 aa8.2□□□□□ -1.1
LEMD3-205ENST00000544506 GJB6O95452 261 aa8.19□□□□□ -1.1
LEMD3-205ENST00000544506 WNT11O96014 354 aa8.19□□□□□ -1.1
LEMD3-205ENST00000544506 EPHX1P07099 455 aa8.19□□□□□ -1.1
LEMD3-205ENST00000544506 CD247P20963 164 aa8.19□□□□□ -1.1
LEMD3-205ENST00000544506 RBL2Q08999 1139 aa8.19□□□□□ -1.1
LEMD3-205ENST00000544506 DDR2Q16832 855 aa8.19□□□□□ -1.1
LEMD3-205ENST00000544506 GAB4Q2WGN9 574 aa8.19□□□□□ -1.1
LEMD3-205ENST00000544506 HEATR6Q6AI08 1181 aaKnown RBP8.19□□□□□ -1.1
LEMD3-205ENST00000544506 MRM1Q6IN84 353 aaKnown RBP8.19□□□□□ -1.1
LEMD3-205ENST00000544506 SYTL5Q8TDW5 730 aaPredicted RBP8.19□□□□□ -1.1
LEMD3-205ENST00000544506 DNAJC2Q99543 621 aaKnown RBP8.19□□□□□ -1.1
LEMD3-205ENST00000544506 KLHL25Q9H0H3 589 aa8.19□□□□□ -1.1
LEMD3-205ENST00000544506 ZFP64Q9NPA5 681 aa8.19□□□□□ -1.1
LEMD3-205ENST00000544506 PAK6Q9NQU5 681 aaPredicted RBP8.19□□□□□ -1.1
LEMD3-205ENST00000544506 PRR13Q9NZ81 148 aa8.19□□□□□ -1.1
LEMD3-205ENST00000544506 ANGEL2Q5VTE6 544 aaKnown RBP8.18□□□□□ -1.1
LEMD3-205ENST00000544506 NBPF6Q5VWK0 638 aa8.18□□□□□ -1.1
LEMD3-205ENST00000544506 ENOX1Q8TC92 643 aaKnown RBP8.18□□□□□ -1.1
LEMD3-205ENST00000544506 UBXN4Q92575 508 aa8.18□□□□□ -1.1
LEMD3-205ENST00000544506 NBPF4Q96M43 638 aa8.18□□□□□ -1.1
LEMD3-205ENST00000544506 CHST7Q9NS84 486 aa8.18□□□□□ -1.1
LEMD3-205ENST00000544506 SUSD2Q9UGT4 822 aa8.18□□□□□ -1.1
LEMD3-205ENST00000544506 DUSP13Q9UII6 198 aa8.18□□□□□ -1.1
LEMD3-205ENST00000544506 MEIS1O00470 390 aa8.17□□□□□ -1.1
LEMD3-205ENST00000544506 ESR1P03372 595 aa8.17□□□□□ -1.1
LEMD3-205ENST00000544506 ITGA4P13612 1032 aa8.17□□□□□ -1.1
LEMD3-205ENST00000544506 ZNF445P59923 1031 aa8.17□□□□□ -1.1
LEMD3-205ENST00000544506 TCEAL1Q15170 157 aa8.17□□□□□ -1.1
LEMD3-205ENST00000544506 TMPRSS7Q7RTY8 843 aa8.17□□□□□ -1.1
LEMD3-205ENST00000544506 CREG2Q8IUH2 290 aa8.17□□□□□ -1.1
LEMD3-205ENST00000544506 DAGLBQ8NCG7 672 aa8.17□□□□□ -1.1
LEMD3-205ENST00000544506 PMFBP1Q8TBY8 1022 aa8.17□□□□□ -1.1
LEMD3-205ENST00000544506 BRF1Q92994 677 aa8.17□□□□□ -1.1
LEMD3-205ENST00000544506 FGD4Q96M96 766 aa8.17□□□□□ -1.1
LEMD3-205ENST00000544506 WHRNQ9P202 907 aa8.17□□□□□ -1.1
LEMD3-205ENST00000544506 NOL9Q5SY16 702 aaKnown RBP8.16□□□□□ -1.1
LEMD3-205ENST00000544506 ZNF655Q8N720 491 aaPredicted RBP8.16□□□□□ -1.1
LEMD3-205ENST00000544506 ADCY4Q8NFM4 1077 aa8.16□□□□□ -1.1
LEMD3-205ENST00000544506 TCTN2Q96GX1 697 aa8.16□□□□□ -1.1
LEMD3-205ENST00000544506 DSCC1Q9BVC3 393 aa8.16□□□□□ -1.1
LEMD3-205ENST00000544506 GBP3Q9H0R5 595 aa8.16□□□□□ -1.1
LEMD3-205ENST00000544506 CARS2Q9HA77 564 aaKnown RBP8.16□□□□□ -1.1
LEMD3-205ENST00000544506 FHOD1Q9Y613 1164 aa8.16□□□□□ -1.1
LEMD3-205ENST00000544506 ANKRD34BA5PLL1 514 aa8.15□□□□□ -1.1
LEMD3-205ENST00000544506 U2SURPO15042 1029 aaKnown RBP8.15□□□□□ -1.1
LEMD3-205ENST00000544506 SUSD5O60279 629 aa8.15□□□□□ -1.1
LEMD3-205ENST00000544506 LTKP29376 864 aa8.15□□□□□ -1.1
LEMD3-205ENST00000544506 ZP2Q05996 745 aa8.15□□□□□ -1.1
LEMD3-205ENST00000544506 SERINC3Q13530 473 aa8.15□□□□□ -1.1
LEMD3-205ENST00000544506 TP53INP2Q8IXH6 220 aa8.15□□□□□ -1.1
LEMD3-205ENST00000544506 APEX2Q9UBZ4 518 aa8.15□□□□□ -1.1
LEMD3-205ENST00000544506 PCDHA11Q9Y5I1 949 aa8.15□□□□□ -1.1
LEMD3-205ENST00000544506 NAT2P11245 290 aa8.14□□□□□ -1.11
LEMD3-205ENST00000544506 FUT4P22083 530 aa8.14□□□□□ -1.11
LEMD3-205ENST00000544506 CTSKP43235 329 aa8.14□□□□□ -1.11
LEMD3-205ENST00000544506 ZNF143P52747 638 aaPredicted RBP8.14□□□□□ -1.11
LEMD3-205ENST00000544506 EGR3Q06889 387 aa8.14□□□□□ -1.11
LEMD3-205ENST00000544506 CRTC3Q6UUV7 619 aa8.14□□□□□ -1.11
LEMD3-205ENST00000544506 ADAT2Q7Z6V5 191 aaKnown RBP8.14□□□□□ -1.11
LEMD3-205ENST00000544506 Q8N3U1 123 aa8.14□□□□□ -1.11
LEMD3-205ENST00000544506 FIBCD1Q8N539 461 aa8.14□□□□□ -1.11
LEMD3-205ENST00000544506 ZNF513Q8N8E2 541 aaPredicted RBP8.14□□□□□ -1.11
LEMD3-205ENST00000544506 NOL6Q9H6R4 1146 aaKnown RBP8.14□□□□□ -1.11
LEMD3-205ENST00000544506 SIRPGQ9P1W8 387 aa8.14□□□□□ -1.11
LEMD3-205ENST00000544506 MSRB2Q9Y3D2 182 aa8.14□□□□□ -1.11
LEMD3-205ENST00000544506 H0Y8X5 98 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms