RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 TEX35Q5T0J7 233 aa17.09■□□□□ 0.33
CHFR-223ENST00000544268 RNF41Q9H4P4 317 aaPredicted RBP17.09■□□□□ 0.33
CHFR-223ENST00000544268 MKRN1Q9UHC7 482 aaKnown RBP17.09■□□□□ 0.33
CHFR-223ENST00000544268 SCN9AQ15858 1988 aa17.09■□□□□ 0.33
CHFR-223ENST00000544268 WNT7AO00755 349 aa17.09■□□□□ 0.33
CHFR-223ENST00000544268 ECE2O60344 883 aa17.09■□□□□ 0.33
CHFR-223ENST00000544268 USP5P45974 858 aa17.09■□□□□ 0.33
CHFR-223ENST00000544268 CPLX2Q6PUV4 134 aaKnown RBP17.09■□□□□ 0.33
CHFR-223ENST00000544268 FAM163AQ96GL9 167 aaPredicted RBP17.09■□□□□ 0.33
CHFR-223ENST00000544268 GAKO14976 1311 aa17.09■□□□□ 0.33
CHFR-223ENST00000544268 BAZ2BQ9UIF8 2168 aaKnown RBP17.08■□□□□ 0.33
CHFR-223ENST00000544268 PRR29P0C7W0 189 aa17.08■□□□□ 0.33
CHFR-223ENST00000544268 POLD1P28340 1107 aa17.08■□□□□ 0.33
CHFR-223ENST00000544268 RESP18Q5W5W9 173 aa17.08■□□□□ 0.33
CHFR-223ENST00000544268 NOSTRINQ8IVI9 506 aa17.08■□□□□ 0.33
CHFR-223ENST00000544268 TXLNBQ8N3L3 684 aa17.08■□□□□ 0.33
CHFR-223ENST00000544268 PDILTQ8N807 584 aa17.08■□□□□ 0.33
CHFR-223ENST00000544268 TGFBRAP1Q8WUH2 860 aa17.08■□□□□ 0.33
CHFR-223ENST00000544268 MCM9Q9NXL9 1143 aa17.08■□□□□ 0.33
CHFR-223ENST00000544268 KIF2AO00139 706 aaPredicted RBP17.08■□□□□ 0.32
CHFR-223ENST00000544268 MMP1P03956 469 aa17.08■□□□□ 0.32
CHFR-223ENST00000544268 USP17L8P0C7I0 530 aa17.08■□□□□ 0.32
CHFR-223ENST00000544268 IFNAR1P17181 557 aa17.08■□□□□ 0.32
CHFR-223ENST00000544268 SLF2Q8IX21 1173 aa17.08■□□□□ 0.32
CHFR-223ENST00000544268 RASSF4Q9H2L5 321 aa17.08■□□□□ 0.32
CHFR-223ENST00000544268 KCNH3Q9ULD8 1083 aa17.08■□□□□ 0.32
CHFR-223ENST00000544268 TTF2Q9UNY4 1162 aaKnown RBP17.08■□□□□ 0.32
CHFR-223ENST00000544268 SUGT1Q9Y2Z0 365 aa17.08■□□□□ 0.32
CHFR-223ENST00000544268 DAGLAQ9Y4D2 1042 aa17.08■□□□□ 0.32
CHFR-223ENST00000544268 TMEM232C9JQI7 657 aa17.07■□□□□ 0.32
CHFR-223ENST00000544268 NMT2O60551 498 aa17.07■□□□□ 0.32
CHFR-223ENST00000544268 CCDC93Q567U6 631 aa17.07■□□□□ 0.32
CHFR-223ENST00000544268 ZNF654Q8IZM8 581 aa17.07■□□□□ 0.32
CHFR-223ENST00000544268 ARPP21Q9UBL0 812 aaPredicted RBP17.07■□□□□ 0.32
CHFR-223ENST00000544268 PCDHA5Q9Y5H7 936 aa17.07■□□□□ 0.32
CHFR-223ENST00000544268 PSDA5PKW4 1024 aaPredicted RBP17.07■□□□□ 0.32
CHFR-223ENST00000544268 PPP6R2O75170 966 aa17.07■□□□□ 0.32
CHFR-223ENST00000544268 RHBDL3P58872 404 aa17.07■□□□□ 0.32
CHFR-223ENST00000544268 SBK1Q52WX2 424 aa17.07■□□□□ 0.32
CHFR-223ENST00000544268 CRACR2BQ8N4Y2 399 aaPredicted RBP17.07■□□□□ 0.32
CHFR-223ENST00000544268 KCND1Q9NSA2 647 aa17.07■□□□□ 0.32
CHFR-223ENST00000544268 VPS54Q9P1Q0 977 aa17.07■□□□□ 0.32
CHFR-223ENST00000544268 TNKSO95271 1327 aa17.07■□□□□ 0.32
CHFR-223ENST00000544268 LAMB1P07942 1786 aa17.06■□□□□ 0.32
CHFR-223ENST00000544268 UTRNP46939 3433 aa17.06■□□□□ 0.32
CHFR-223ENST00000544268 PPIP5K2O43314 1243 aa17.06■□□□□ 0.32
CHFR-223ENST00000544268 PLA2G4AP47712 749 aa17.06■□□□□ 0.32
CHFR-223ENST00000544268 SCNN1DP51172 638 aa17.06■□□□□ 0.32
CHFR-223ENST00000544268 MAPKAPK5Q8IW41 473 aa17.06■□□□□ 0.32
CHFR-223ENST00000544268 FANCBQ8NB91 859 aa17.06■□□□□ 0.32
CHFR-223ENST00000544268 SUPT20HQ8NEM7 779 aa17.06■□□□□ 0.32
CHFR-223ENST00000544268 ZBTB9Q96C00 473 aa17.06■□□□□ 0.32
CHFR-223ENST00000544268 PPP1R1BQ9UD71 204 aaPredicted RBP17.06■□□□□ 0.32
CHFR-223ENST00000544268 RSPH14Q9UHP6 348 aa17.06■□□□□ 0.32
CHFR-223ENST00000544268 CDK5RAP2Q96SN8 1893 aa17.06■□□□□ 0.32
CHFR-223ENST00000544268 ADAMTS3O15072 1205 aa17.06■□□□□ 0.32
CHFR-223ENST00000544268 PLEKHA8P1O95397 391 aa17.06■□□□□ 0.32
CHFR-223ENST00000544268 PNMA6AP0CW24 399 aaPredicted RBP17.06■□□□□ 0.32
CHFR-223ENST00000544268 CASP1P29466 404 aa17.06■□□□□ 0.32
CHFR-223ENST00000544268 TPM4P67936 248 aa17.06■□□□□ 0.32
CHFR-223ENST00000544268 FANCCQ00597 558 aa17.06■□□□□ 0.32
CHFR-223ENST00000544268 TEX11Q8IYF3 940 aa17.06■□□□□ 0.32
CHFR-223ENST00000544268 CNNM3Q8NE01 707 aa17.06■□□□□ 0.32
CHFR-223ENST00000544268 CABP5Q9NP86 173 aa17.06■□□□□ 0.32
CHFR-223ENST00000544268 TUBE1Q9UJT0 475 aa17.06■□□□□ 0.32
CHFR-223ENST00000544268 FGRP09769 529 aa17.05■□□□□ 0.32
CHFR-223ENST00000544268 TGFB2P61812 414 aa17.05■□□□□ 0.32
CHFR-223ENST00000544268 STRIP1Q5VSL9 837 aa17.05■□□□□ 0.32
CHFR-223ENST00000544268 E4F1Q66K89 784 aaPredicted RBP17.05■□□□□ 0.32
CHFR-223ENST00000544268 RTKN2Q8IZC4 609 aa17.05■□□□□ 0.32
CHFR-223ENST00000544268 ENAHQ8N8S7 591 aaPredicted RBP17.05■□□□□ 0.32
CHFR-223ENST00000544268 ESR2Q92731 530 aa17.05■□□□□ 0.32
CHFR-223ENST00000544268 FANCLQ9NW38 375 aa17.05■□□□□ 0.32
CHFR-223ENST00000544268 POLR2DO15514 142 aaKnown RBP17.05■□□□□ 0.32
CHFR-223ENST00000544268 VEGFAP15692 232 aaPredicted RBP17.05■□□□□ 0.32
CHFR-223ENST00000544268 SEC23AQ15436 765 aa17.05■□□□□ 0.32
CHFR-223ENST00000544268 DACT2Q5SW24 774 aa17.05■□□□□ 0.32
CHFR-223ENST00000544268 KRBA2Q6ZNG9 492 aa17.05■□□□□ 0.32
CHFR-223ENST00000544268 TRMT44Q8IYL2 757 aaKnown RBP17.05■□□□□ 0.32
CHFR-223ENST00000544268 CCAR2Q8N163 923 aaKnown RBP17.05■□□□□ 0.32
CHFR-223ENST00000544268 UBAC1Q9BSL1 405 aa17.05■□□□□ 0.32
CHFR-223ENST00000544268 PIM2Q9P1W9 311 aa17.05■□□□□ 0.32
CHFR-223ENST00000544268 SAP30BPQ9UHR5 308 aaKnown RBP17.05■□□□□ 0.32
CHFR-223ENST00000544268 FBXO2Q9UK22 296 aaPredicted RBP17.05■□□□□ 0.32
CHFR-223ENST00000544268 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.05■□□□□ 0.32
CHFR-223ENST00000544268 ADAMTSL1Q8N6G6 1762 aa17.04■□□□□ 0.32
CHFR-223ENST00000544268 PLCG2P16885 1265 aa17.04■□□□□ 0.32
CHFR-223ENST00000544268 NOP2P46087 812 aaKnown RBP17.04■□□□□ 0.32
CHFR-223ENST00000544268 CLCN6P51797 869 aa17.04■□□□□ 0.32
CHFR-223ENST00000544268 C12orf60Q5U649 245 aa17.04■□□□□ 0.32
CHFR-223ENST00000544268 SGIP1Q9BQI5 828 aa17.04■□□□□ 0.32
CHFR-223ENST00000544268 BPIFA3Q9BQP9 254 aa17.04■□□□□ 0.32
CHFR-223ENST00000544268 L2HGDHQ9H9P8 463 aa17.04■□□□□ 0.32
CHFR-223ENST00000544268 SERTAD1Q9UHV2 236 aa17.04■□□□□ 0.32
CHFR-223ENST00000544268 NAV1Q8NEY1 1877 aa17.04■□□□□ 0.32
CHFR-223ENST00000544268 USP17L3A6NCW0 530 aa17.04■□□□□ 0.32
CHFR-223ENST00000544268 USP17L4A6NCW7 530 aa17.04■□□□□ 0.32
CHFR-223ENST00000544268 YDJCA8MPS7 323 aa17.04■□□□□ 0.32
CHFR-223ENST00000544268 PCP11498 1178 aaKnown RBP17.04■□□□□ 0.32
CHFR-223ENST00000544268 USP17L1Q7RTZ2 530 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms