RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 POTEEQ6S8J3 1075 aa11.59□□□□□ -0.55
TNFRSF1A-214ENST00000543048 LBX2Q6XYB7 198 aa11.59□□□□□ -0.55
TNFRSF1A-214ENST00000543048 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.59□□□□□ -0.55
TNFRSF1A-214ENST00000543048 VCPKMTQ9H867 229 aa11.59□□□□□ -0.55
TNFRSF1A-214ENST00000543048 ROBO3Q96MS0 1386 aa11.58□□□□□ -0.56
TNFRSF1A-214ENST00000543048 CNMDO75829 334 aa11.58□□□□□ -0.56
TNFRSF1A-214ENST00000543048 SDSP20132 328 aa11.58□□□□□ -0.56
TNFRSF1A-214ENST00000543048 CCNA1P78396 465 aa11.58□□□□□ -0.56
TNFRSF1A-214ENST00000543048 PPARAQ07869 468 aa11.58□□□□□ -0.56
TNFRSF1A-214ENST00000543048 CLEC10AQ8IUN9 316 aa11.58□□□□□ -0.56
TNFRSF1A-214ENST00000543048 FAM227BQ96M60 508 aa11.58□□□□□ -0.56
TNFRSF1A-214ENST00000543048 TANGO6Q9C0B7 1094 aa11.58□□□□□ -0.56
TNFRSF1A-214ENST00000543048 GOPCQ9HD26 462 aa11.58□□□□□ -0.56
TNFRSF1A-214ENST00000543048 NYAP2Q9P242 653 aa11.58□□□□□ -0.56
TNFRSF1A-214ENST00000543048 A0A0D9SFI3 127 aa11.57□□□□□ -0.56
TNFRSF1A-214ENST00000543048 SPDYE16A6NNV3 312 aaPredicted RBP11.57□□□□□ -0.56
TNFRSF1A-214ENST00000543048 WDR46O15213 610 aaKnown RBP11.57□□□□□ -0.56
TNFRSF1A-214ENST00000543048 PRDM1O75626 825 aa11.57□□□□□ -0.56
TNFRSF1A-214ENST00000543048 CCL5P13501 91 aa11.57□□□□□ -0.56
TNFRSF1A-214ENST00000543048 ELNP15502 786 aa11.57□□□□□ -0.56
TNFRSF1A-214ENST00000543048 MFAP1P55081 439 aaKnown RBP11.57□□□□□ -0.56
TNFRSF1A-214ENST00000543048 NMIQ13287 307 aaPredicted RBP11.57□□□□□ -0.56
TNFRSF1A-214ENST00000543048 MTFR1Q15390 333 aa11.57□□□□□ -0.56
TNFRSF1A-214ENST00000543048 VPS53Q5VIR6 699 aa11.57□□□□□ -0.56
TNFRSF1A-214ENST00000543048 PLEKHH3Q7Z736 793 aa11.57□□□□□ -0.56
TNFRSF1A-214ENST00000543048 SPICE1Q8N0Z3 855 aa11.57□□□□□ -0.56
TNFRSF1A-214ENST00000543048 NEDD1Q8NHV4 660 aa11.57□□□□□ -0.56
TNFRSF1A-214ENST00000543048 MKL1Q969V6 931 aa11.57□□□□□ -0.56
TNFRSF1A-214ENST00000543048 NUDT12Q9BQG2 462 aa11.57□□□□□ -0.56
TNFRSF1A-214ENST00000543048 RNF208Q9H0X6 261 aa11.57□□□□□ -0.56
TNFRSF1A-214ENST00000543048 PORCNQ9H237 461 aa11.57□□□□□ -0.56
TNFRSF1A-214ENST00000543048 CWC22Q9HCG8 908 aaKnown RBP11.57□□□□□ -0.56
TNFRSF1A-214ENST00000543048 BTBD7Q9P203 1132 aa11.57□□□□□ -0.56
TNFRSF1A-214ENST00000543048 CLIP2Q9UDT6 1046 aa11.57□□□□□ -0.56
TNFRSF1A-214ENST00000543048 COLQQ9Y215 455 aaPredicted RBP11.57□□□□□ -0.56
TNFRSF1A-214ENST00000543048 IGKV6D-41A0A0C4DH26 115 aa11.56□□□□□ -0.56
TNFRSF1A-214ENST00000543048 HIP1O00291 1037 aa11.56□□□□□ -0.56
TNFRSF1A-214ENST00000543048 FOXP2O15409 715 aa11.56□□□□□ -0.56
TNFRSF1A-214ENST00000543048 RAD21O60216 631 aa11.56□□□□□ -0.56
TNFRSF1A-214ENST00000543048 FLOT1O75955 427 aa11.56□□□□□ -0.56
TNFRSF1A-214ENST00000543048 FGAP02671 866 aa11.56□□□□□ -0.56
TNFRSF1A-214ENST00000543048 NEFLP07196 543 aa11.56□□□□□ -0.56
TNFRSF1A-214ENST00000543048 GJB1P08034 283 aa11.56□□□□□ -0.56
TNFRSF1A-214ENST00000543048 TSPY3P0CV98 308 aa11.56□□□□□ -0.56
TNFRSF1A-214ENST00000543048 TSPY8P0CW00 308 aa11.56□□□□□ -0.56
TNFRSF1A-214ENST00000543048 HSPD1P10809 573 aaKnown RBP11.56□□□□□ -0.56
TNFRSF1A-214ENST00000543048 XRCC5P13010 732 aaKnown RBP11.56□□□□□ -0.56
TNFRSF1A-214ENST00000543048 CYP2B6P20813 491 aa11.56□□□□□ -0.56
TNFRSF1A-214ENST00000543048 TFAP4Q01664 338 aa11.56□□□□□ -0.56
TNFRSF1A-214ENST00000543048 CTDSPL2Q05D32 466 aa11.56□□□□□ -0.56
TNFRSF1A-214ENST00000543048 GPR142Q7Z601 462 aa11.56□□□□□ -0.56
TNFRSF1A-214ENST00000543048 TRMT44Q8IYL2 757 aaKnown RBP11.56□□□□□ -0.56
TNFRSF1A-214ENST00000543048 MB21D1Q8N884 522 aa11.56□□□□□ -0.56
TNFRSF1A-214ENST00000543048 NKX2-3Q8TAU0 364 aa11.56□□□□□ -0.56
TNFRSF1A-214ENST00000543048 MTMR4Q9NYA4 1195 aa11.56□□□□□ -0.56
TNFRSF1A-214ENST00000543048 ANAPC4Q9UJX5 808 aa11.56□□□□□ -0.56
TNFRSF1A-214ENST00000543048 F5H6K3 240 aa11.55□□□□□ -0.56
TNFRSF1A-214ENST00000543048 STK25O00506 426 aa11.55□□□□□ -0.56
TNFRSF1A-214ENST00000543048 INHAP05111 366 aa11.55□□□□□ -0.56
TNFRSF1A-214ENST00000543048 CAPN2P17655 700 aa11.55□□□□□ -0.56
TNFRSF1A-214ENST00000543048 PDE4AP27815 886 aa11.55□□□□□ -0.56
TNFRSF1A-214ENST00000543048 RGS2P41220 211 aa11.55□□□□□ -0.56
TNFRSF1A-214ENST00000543048 KLRC3Q07444 240 aa11.55□□□□□ -0.56
TNFRSF1A-214ENST00000543048 FAM47AQ5JRC9 791 aa11.55□□□□□ -0.56
TNFRSF1A-214ENST00000543048 MORN1Q5T089 497 aa11.55□□□□□ -0.56
TNFRSF1A-214ENST00000543048 SOCS4Q8WXH5 440 aa11.55□□□□□ -0.56
TNFRSF1A-214ENST00000543048 USP6NLQ92738 828 aa11.55□□□□□ -0.56
TNFRSF1A-214ENST00000543048 CEP95Q96GE4 821 aa11.55□□□□□ -0.56
TNFRSF1A-214ENST00000543048 UNC93B1Q9H1C4 597 aa11.55□□□□□ -0.56
TNFRSF1A-214ENST00000543048 INCENPQ9NQS7 918 aa11.55□□□□□ -0.56
TNFRSF1A-214ENST00000543048 ADAMTS5Q9UNA0 930 aa11.55□□□□□ -0.56
TNFRSF1A-214ENST00000543048 CCDC171Q6TFL3 1326 aa11.55□□□□□ -0.56
TNFRSF1A-214ENST00000543048 SLC15A5A6NIM6 579 aa11.54□□□□□ -0.56
TNFRSF1A-214ENST00000543048 STRNO43815 780 aa11.54□□□□□ -0.56
TNFRSF1A-214ENST00000543048 TTLL1O95922 423 aa11.54□□□□□ -0.56
TNFRSF1A-214ENST00000543048 FGRP09769 529 aa11.54□□□□□ -0.56
TNFRSF1A-214ENST00000543048 PTPREP23469 700 aa11.54□□□□□ -0.56
TNFRSF1A-214ENST00000543048 GJA8P48165 433 aa11.54□□□□□ -0.56
TNFRSF1A-214ENST00000543048 PPP4R3BQ5MIZ7 849 aa11.54□□□□□ -0.56
TNFRSF1A-214ENST00000543048 FAM83BQ5T0W9 1011 aa11.54□□□□□ -0.56
TNFRSF1A-214ENST00000543048 WDR78Q5VTH9 848 aa11.54□□□□□ -0.56
TNFRSF1A-214ENST00000543048 CWC27Q6UX04 472 aaKnown RBP11.54□□□□□ -0.56
TNFRSF1A-214ENST00000543048 ZNF589Q86UQ0 364 aaPredicted RBP11.54□□□□□ -0.56
TNFRSF1A-214ENST00000543048 SPATC1LQ9H0A9 340 aa11.54□□□□□ -0.56
TNFRSF1A-214ENST00000543048 DIAPH3Q9NSV4 1193 aa11.54□□□□□ -0.56
TNFRSF1A-214ENST00000543048 SYNPO2Q9UMS6 1093 aa11.54□□□□□ -0.56
TNFRSF1A-214ENST00000543048 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.54□□□□□ -0.56
TNFRSF1A-214ENST00000543048 STK24Q9Y6E0 443 aa11.54□□□□□ -0.56
TNFRSF1A-214ENST00000543048 IVNS1ABPQ9Y6Y0 642 aa11.54□□□□□ -0.56
TNFRSF1A-214ENST00000543048 SMCHD1A6NHR9 2005 aa11.53□□□□□ -0.56
TNFRSF1A-214ENST00000543048 PLXNA1Q9UIW2 1896 aa11.53□□□□□ -0.56
TNFRSF1A-214ENST00000543048 TSPY2A6NKD2 308 aa11.53□□□□□ -0.56
TNFRSF1A-214ENST00000543048 POTEB2H3BUK9 544 aa11.53□□□□□ -0.56
TNFRSF1A-214ENST00000543048 ORC4O43929 436 aa11.53□□□□□ -0.56
TNFRSF1A-214ENST00000543048 RANBP6O60518 1105 aaKnown RBP11.53□□□□□ -0.56
TNFRSF1A-214ENST00000543048 SGPL1O95470 568 aa11.53□□□□□ -0.56
TNFRSF1A-214ENST00000543048 NDUFB10O96000 172 aa11.53□□□□□ -0.56
TNFRSF1A-214ENST00000543048 HMGCRP04035 888 aa11.53□□□□□ -0.56
TNFRSF1A-214ENST00000543048 IRX5P78411 483 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF1A-214ENST00000543048 MAP2K5Q13163 448 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 898.4 ms