RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 CCDC196A0A1B0GTZ2 297 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 USP17L15C9J2P7 530 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 USP17L13C9JLJ4 530 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 USP17L11C9JVI0 530 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 USP17L18D6R9N7 530 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 USP17L22D6RA61 530 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 USP17L17D6RBQ6 530 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 USP17L19D6RCP7 530 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 USP17L20D6RJB6 530 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 ZBTB43O43298 467 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 FDX1P10109 184 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 BMP3P12645 472 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 VCAM1P19320 739 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 CDC27P30260 824 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 DSG3P32926 999 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 ADD1P35611 737 aaKnown RBP6.85□□□□□ -1.31
ABCF1-207ENST00000542772 GNAQP50148 359 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 HMGCS2P54868 508 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 FGD1P98174 961 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 ATP2B2Q01814 1243 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 KIF23Q02241 960 aaPredicted RBP6.85□□□□□ -1.31
ABCF1-207ENST00000542772 USP17L24Q0WX57 530 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 FUT2Q10981 343 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 NOGQ13253 232 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 MTMR2Q13614 643 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 CUL4AQ13619 759 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 COG2Q14746 738 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 ASPRV1Q53RT3 343 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 CYP4F22Q6NT55 531 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 LBX2Q6XYB7 198 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 NFXL1Q6ZNB6 911 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 LRRC47Q8N1G4 583 aaKnown RBP6.85□□□□□ -1.31
ABCF1-207ENST00000542772 STAG2Q8N3U4 1231 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 PRPF38AQ8NAV1 312 aaKnown RBP6.85□□□□□ -1.31
ABCF1-207ENST00000542772 CHURC1Q8WUH1 139 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 BRI3BPQ8WY22 251 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 CHMP4CQ96CF2 233 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 CAPNS2Q96L46 248 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 LZTS2Q9BRK4 669 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 SH2B1Q9NRF2 756 aaPredicted RBP6.85□□□□□ -1.31
ABCF1-207ENST00000542772 RBM28Q9NW13 759 aaKnown RBP6.85□□□□□ -1.31
ABCF1-207ENST00000542772 TMOD4Q9NZQ9 345 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 FEM1BQ9UK73 627 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 AGTPBP1Q9UPW5 1226 aa6.85□□□□□ -1.31
ABCF1-207ENST00000542772 MYPNQ86TC9 1320 aa6.84□□□□□ -1.31
ABCF1-207ENST00000542772 WDR33Q9C0J8 1336 aaKnown RBP6.84□□□□□ -1.31
ABCF1-207ENST00000542772 CCL15-CCL14A0A0B4J2E2 113 aa6.84□□□□□ -1.31
ABCF1-207ENST00000542772 BTBD19C9JJ37 291 aa6.84□□□□□ -1.31
ABCF1-207ENST00000542772 KLRF2D3W0D1 207 aa6.84□□□□□ -1.31
ABCF1-207ENST00000542772 ATP2A1O14983 1001 aa6.84□□□□□ -1.31
ABCF1-207ENST00000542772 CYTH3O43739 400 aa6.84□□□□□ -1.31
ABCF1-207ENST00000542772 PARP1P09874 1014 aaKnown RBP6.84□□□□□ -1.31
ABCF1-207ENST00000542772 IFNAR1P17181 557 aa6.84□□□□□ -1.31
ABCF1-207ENST00000542772 KIF5BP33176 963 aa6.84□□□□□ -1.31
ABCF1-207ENST00000542772 SLC1A4P43007 532 aa6.84□□□□□ -1.31
ABCF1-207ENST00000542772 VEGFBP49765 207 aa6.84□□□□□ -1.31
ABCF1-207ENST00000542772 SCRN1Q12765 414 aa6.84□□□□□ -1.31
ABCF1-207ENST00000542772 DGKZQ13574 1117 aa6.84□□□□□ -1.31
ABCF1-207ENST00000542772 CCL15Q16663 113 aa6.84□□□□□ -1.31
ABCF1-207ENST00000542772 SLC35G1Q2M3R5 365 aa6.84□□□□□ -1.31
ABCF1-207ENST00000542772 TTBK2Q6IQ55 1244 aa6.84□□□□□ -1.31
ABCF1-207ENST00000542772 POTEEQ6S8J3 1075 aa6.84□□□□□ -1.31
ABCF1-207ENST00000542772 NBPF11Q86T75 865 aa6.84□□□□□ -1.31
ABCF1-207ENST00000542772 FAM160B2Q86V87 743 aa6.84□□□□□ -1.31
ABCF1-207ENST00000542772 SRBD1Q8N5C6 995 aaKnown RBP6.84□□□□□ -1.31
ABCF1-207ENST00000542772 CTCFLQ8NI51 663 aaPredicted RBP6.84□□□□□ -1.31
ABCF1-207ENST00000542772 TMX3Q96JJ7 454 aa6.84□□□□□ -1.31
ABCF1-207ENST00000542772 ZIC5Q96T25 663 aa6.84□□□□□ -1.31
ABCF1-207ENST00000542772 P2RX7Q99572 595 aaKnown RBP6.84□□□□□ -1.31
ABCF1-207ENST00000542772 LARP6Q9BRS8 491 aaKnown RBP6.84□□□□□ -1.31
ABCF1-207ENST00000542772 CFHR5Q9BXR6 569 aa6.84□□□□□ -1.31
ABCF1-207ENST00000542772 SLKQ9H2G2 1235 aaPredicted RBP6.84□□□□□ -1.31
ABCF1-207ENST00000542772 TSHZ2Q9NRE2 1034 aa6.84□□□□□ -1.31
ABCF1-207ENST00000542772 LOC285556D6RIA3 1793 aa6.84□□□□□ -1.31
ABCF1-207ENST00000542772 PARP14Q460N5 1801 aa6.83□□□□□ -1.32
ABCF1-207ENST00000542772 TMEM232C9JQI7 657 aa6.83□□□□□ -1.32
ABCF1-207ENST00000542772 PDHXO00330 501 aa6.83□□□□□ -1.32
ABCF1-207ENST00000542772 IGF2BP3O00425 579 aaKnown RBP eCLIP6.83□□□□□ -1.32
ABCF1-207ENST00000542772 PRPF3O43395 683 aaKnown RBP6.83□□□□□ -1.32
ABCF1-207ENST00000542772 DHX16O60231 1041 aaKnown RBP6.83□□□□□ -1.32
ABCF1-207ENST00000542772 LARGE1O95461 756 aa6.83□□□□□ -1.32
ABCF1-207ENST00000542772 CTDNEP1O95476 244 aa6.83□□□□□ -1.32
ABCF1-207ENST00000542772 GOLGA8HP0CJ92 632 aa6.83□□□□□ -1.32
ABCF1-207ENST00000542772 OSBPP22059 807 aa6.83□□□□□ -1.32
ABCF1-207ENST00000542772 METAP2P50579 478 aaKnown RBP eCLIP6.83□□□□□ -1.32
ABCF1-207ENST00000542772 STAT2P52630 851 aa6.83□□□□□ -1.32
ABCF1-207ENST00000542772 CCT2P78371 535 aaKnown RBP6.83□□□□□ -1.32
ABCF1-207ENST00000542772 ST3GAL1Q11201 340 aa6.83□□□□□ -1.32
ABCF1-207ENST00000542772 SREBF2Q12772 1141 aa6.83□□□□□ -1.32
ABCF1-207ENST00000542772 PABPC4Q13310 644 aaKnown RBP eCLIP6.83□□□□□ -1.32
ABCF1-207ENST00000542772 ZYXQ15942 572 aaKnown RBP6.83□□□□□ -1.32
ABCF1-207ENST00000542772 FAM83BQ5T0W9 1011 aa6.83□□□□□ -1.32
ABCF1-207ENST00000542772 TREML2Q5T2D2 321 aa6.83□□□□□ -1.32
ABCF1-207ENST00000542772 TMTC3Q6ZXV5 915 aa6.83□□□□□ -1.32
ABCF1-207ENST00000542772 KCTD1Q719H9 257 aa6.83□□□□□ -1.32
ABCF1-207ENST00000542772 IFNL1Q8IU54 200 aa6.83□□□□□ -1.32
ABCF1-207ENST00000542772 ADGRF4Q8IZF3 695 aa6.83□□□□□ -1.32
ABCF1-207ENST00000542772 SPICE1Q8N0Z3 855 aa6.83□□□□□ -1.32
ABCF1-207ENST00000542772 FAM43AQ8N2R8 423 aa6.83□□□□□ -1.32
ABCF1-207ENST00000542772 RGS22Q8NE09 1264 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms