RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 RPS8P62241 208 aaKnown RBP9.16□□□□□ -0.94
PRKAB1-207ENST00000542698 RASGRF1Q13972 1273 aa9.16□□□□□ -0.94
PRKAB1-207ENST00000542698 RBM43Q6ZSC3 357 aaKnown RBP9.16□□□□□ -0.94
PRKAB1-207ENST00000542698 DYMQ7RTS9 669 aa9.16□□□□□ -0.94
PRKAB1-207ENST00000542698 C2CD5Q86YS7 1000 aa9.16□□□□□ -0.94
PRKAB1-207ENST00000542698 LCORLQ8N3X6 602 aa9.16□□□□□ -0.94
PRKAB1-207ENST00000542698 PNMA1Q8ND90 353 aa9.16□□□□□ -0.94
PRKAB1-207ENST00000542698 NOX5Q96PH1 765 aa9.16□□□□□ -0.94
PRKAB1-207ENST00000542698 TAOK3Q9H2K8 898 aa9.16□□□□□ -0.94
PRKAB1-207ENST00000542698 CCDC172P0C7W6 258 aa9.16□□□□□ -0.94
PRKAB1-207ENST00000542698 NEFHP12036 1026 aa9.16□□□□□ -0.94
PRKAB1-207ENST00000542698 LONP1P36776 959 aaKnown RBP9.16□□□□□ -0.94
PRKAB1-207ENST00000542698 MRPL12P52815 198 aaKnown RBP9.16□□□□□ -0.94
PRKAB1-207ENST00000542698 TNNC1P63316 161 aa9.16□□□□□ -0.94
PRKAB1-207ENST00000542698 PICALMQ13492 652 aa9.16□□□□□ -0.94
PRKAB1-207ENST00000542698 RAPGEF1Q13905 1077 aa9.16□□□□□ -0.94
PRKAB1-207ENST00000542698 INF2Q27J81 1249 aa9.16□□□□□ -0.94
PRKAB1-207ENST00000542698 SLC9C1Q4G0N8 1177 aa9.16□□□□□ -0.94
PRKAB1-207ENST00000542698 STXBP4Q6ZWJ1 553 aa9.16□□□□□ -0.94
PRKAB1-207ENST00000542698 CCDC65Q8IXS2 484 aa9.16□□□□□ -0.94
PRKAB1-207ENST00000542698 SYNE4Q8N205 404 aa9.16□□□□□ -0.94
PRKAB1-207ENST00000542698 NGLY1Q96IV0 654 aa9.16□□□□□ -0.94
PRKAB1-207ENST00000542698 SAP30BPQ9UHR5 308 aaKnown RBP9.16□□□□□ -0.94
PRKAB1-207ENST00000542698 KCNJ6P48051 423 aa9.15□□□□□ -0.94
PRKAB1-207ENST00000542698 GTF2A1P52655 376 aaPredicted RBP9.15□□□□□ -0.94
PRKAB1-207ENST00000542698 RNASE9P60153 205 aaKnown RBP9.15□□□□□ -0.94
PRKAB1-207ENST00000542698 MAP2K1Q02750 393 aaPredicted RBP9.15□□□□□ -0.94
PRKAB1-207ENST00000542698 TYW1BQ6NUM6 668 aa9.15□□□□□ -0.94
PRKAB1-207ENST00000542698 TEX11Q8IYF3 940 aa9.15□□□□□ -0.94
PRKAB1-207ENST00000542698 SYCP3Q8IZU3 236 aa9.15□□□□□ -0.94
PRKAB1-207ENST00000542698 ZNF579Q8NAF0 562 aaKnown RBP9.15□□□□□ -0.94
PRKAB1-207ENST00000542698 TRIM58Q8NG06 486 aa9.15□□□□□ -0.94
PRKAB1-207ENST00000542698 WDR66Q8TBY9 1149 aa9.15□□□□□ -0.94
PRKAB1-207ENST00000542698 MED4Q9NPJ6 270 aa9.15□□□□□ -0.94
PRKAB1-207ENST00000542698 SEC31BQ9NQW1 1179 aa9.15□□□□□ -0.94
PRKAB1-207ENST00000542698 GOLGA6L10A0A0M3HER8 536 aa9.15□□□□□ -0.94
PRKAB1-207ENST00000542698 F8W031 263 aaPredicted RBP9.15□□□□□ -0.94
PRKAB1-207ENST00000542698 NDUFAB1O14561 156 aa9.15□□□□□ -0.94
PRKAB1-207ENST00000542698 ENC1O14682 589 aa9.15□□□□□ -0.94
PRKAB1-207ENST00000542698 DDAH1O94760 285 aa9.15□□□□□ -0.94
PRKAB1-207ENST00000542698 IBSPP21815 317 aaPredicted RBP9.15□□□□□ -0.94
PRKAB1-207ENST00000542698 CDC25AP30304 524 aa9.15□□□□□ -0.94
PRKAB1-207ENST00000542698 IL6STP40189 918 aaPredicted RBP9.15□□□□□ -0.94
PRKAB1-207ENST00000542698 ST3GAL1Q11201 340 aa9.15□□□□□ -0.94
PRKAB1-207ENST00000542698 PPFIA1Q13136 1202 aa9.15□□□□□ -0.94
PRKAB1-207ENST00000542698 RRAGAQ7L523 313 aa9.15□□□□□ -0.94
PRKAB1-207ENST00000542698 GPIHBP1Q8IV16 184 aa9.15□□□□□ -0.94
PRKAB1-207ENST00000542698 PAGE5Q96GU1 130 aa9.15□□□□□ -0.94
PRKAB1-207ENST00000542698 LZTS2Q9BRK4 669 aa9.15□□□□□ -0.94
PRKAB1-207ENST00000542698 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.15□□□□□ -0.94
PRKAB1-207ENST00000542698 ARPP21Q9UBL0 812 aaPredicted RBP9.15□□□□□ -0.94
PRKAB1-207ENST00000542698 MYO5BQ9ULV0 1848 aa9.15□□□□□ -0.94
PRKAB1-207ENST00000542698 A6NNZ2 444 aa9.15□□□□□ -0.94
PRKAB1-207ENST00000542698 SNAP23O00161 211 aa9.15□□□□□ -0.94
PRKAB1-207ENST00000542698 SEPT7Q16181 437 aaKnown RBP9.15□□□□□ -0.94
PRKAB1-207ENST00000542698 TUBB8Q3ZCM7 444 aa9.15□□□□□ -0.94
PRKAB1-207ENST00000542698 ACRBPQ8NEB7 543 aa9.15□□□□□ -0.94
PRKAB1-207ENST00000542698 GIMAP7Q8NHV1 300 aa9.15□□□□□ -0.94
PRKAB1-207ENST00000542698 GCOM1H8Y6P7 765 aaPredicted RBP9.15□□□□□ -0.95
PRKAB1-207ENST00000542698 MYZAPP0CAP1 466 aa9.15□□□□□ -0.95
PRKAB1-207ENST00000542698 SSR1P43307 286 aaKnown RBP9.15□□□□□ -0.95
PRKAB1-207ENST00000542698 TRIM28Q13263 835 aaKnown RBP9.15□□□□□ -0.95
PRKAB1-207ENST00000542698 SGMS1Q86VZ5 419 aa9.15□□□□□ -0.95
PRKAB1-207ENST00000542698 IFT20Q8IY31 132 aa9.15□□□□□ -0.95
PRKAB1-207ENST00000542698 DHX37Q8IY37 1157 aaKnown RBP9.15□□□□□ -0.95
PRKAB1-207ENST00000542698 GOLGA5Q8TBA6 731 aa9.15□□□□□ -0.95
PRKAB1-207ENST00000542698 DPF2Q92785 391 aa9.15□□□□□ -0.95
PRKAB1-207ENST00000542698 TUBGCP2Q9BSJ2 902 aa9.15□□□□□ -0.95
PRKAB1-207ENST00000542698 TMOD2Q9NZR1 351 aa9.15□□□□□ -0.95
PRKAB1-207ENST00000542698 SMCO2A6NFE2 343 aa9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 PRPF3O43395 683 aaKnown RBP9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 UBE4AQ14139 1066 aa9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 TNIP1Q15025 636 aa9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 HLFQ16534 295 aa9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 NYAP1Q6ZVC0 841 aa9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 FAM71BQ8TC56 605 aa9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 SNX29Q8TEQ0 813 aa9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 TBC1D5Q92609 795 aa9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 GPKOWQ92917 476 aaPredicted RBP eCLIP9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 IQCDQ96DY2 449 aa9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 ISCA1Q9BUE6 129 aa9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 LY9Q9HBG7 655 aa9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 CEP170BQ9Y4F5 1589 aaPredicted RBP9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 TMEM94Q12767 1356 aa9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 GSTTP1A0A1W2PQM5 241 aa9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 CETN3O15182 167 aa9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 CETN2P41208 172 aa9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 CFAP221Q4G0U5 840 aa9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 HERC4Q5GLZ8 1057 aaPredicted RBP9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 TOGARAM2Q6ZUX3 1019 aa9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 TRMT1LQ7Z2T5 733 aaKnown RBP9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 REXO1Q8N1G1 1221 aaKnown RBP9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 PIGBQ92521 554 aa9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 IL17RAQ96F46 866 aa9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 RABEP2Q9H5N1 569 aa9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 NLRC4Q9NPP4 1024 aa9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 ATP8A2Q9NTI2 1148 aa9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 RTCBQ9Y3I0 505 aaKnown RBP9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 UBN2Q6ZU65 1347 aa9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 FER1L4A9Z1Z3 1794 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms