RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 GOPCQ9HD26 462 aa16.94■□□□□ 0.3
SNHG1-213ENST00000540725 FBXO28Q9NVF7 368 aa16.94■□□□□ 0.3
SNHG1-213ENST00000540725 GSG1L2A8MUP6 293 aa16.93■□□□□ 0.3
SNHG1-213ENST00000540725 DNM1LO00429 736 aa16.93■□□□□ 0.3
SNHG1-213ENST00000540725 RAD21O60216 631 aa16.93■□□□□ 0.3
SNHG1-213ENST00000540725 SLC25A27O95847 323 aa16.93■□□□□ 0.3
SNHG1-213ENST00000540725 FCER1AP12319 257 aa16.93■□□□□ 0.3
SNHG1-213ENST00000540725 SBK1Q52WX2 424 aa16.93■□□□□ 0.3
SNHG1-213ENST00000540725 TDHQ8IZJ6 230 aa16.93■□□□□ 0.3
SNHG1-213ENST00000540725 APPBP2Q92624 585 aa16.93■□□□□ 0.3
SNHG1-213ENST00000540725 OSBP2Q969R2 916 aa16.93■□□□□ 0.3
SNHG1-213ENST00000540725 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.93■□□□□ 0.3
SNHG1-213ENST00000540725 UBE2OQ9C0C9 1292 aaKnown RBP16.93■□□□□ 0.3
SNHG1-213ENST00000540725 ADAMTS5Q9UNA0 930 aa16.93■□□□□ 0.3
SNHG1-213ENST00000540725 COL6A3P12111 3177 aa16.93■□□□□ 0.3
SNHG1-213ENST00000540725 RASA1P20936 1047 aa16.92■□□□□ 0.3
SNHG1-213ENST00000540725 FAM83BQ5T0W9 1011 aa16.92■□□□□ 0.3
SNHG1-213ENST00000540725 GIMAP6Q6P9H5 292 aa16.92■□□□□ 0.3
SNHG1-213ENST00000540725 MAML3Q96JK9 1138 aa16.92■□□□□ 0.3
SNHG1-213ENST00000540725 PPP1R9AQ9ULJ8 1098 aa16.92■□□□□ 0.3
SNHG1-213ENST00000540725 ROBO3Q96MS0 1386 aa16.92■□□□□ 0.3
SNHG1-213ENST00000540725 LTBP2Q14767 1821 aa16.91■□□□□ 0.3
SNHG1-213ENST00000540725 MINDY4BA8MYZ0 360 aa16.91■□□□□ 0.3
SNHG1-213ENST00000540725 RNF113AO15541 343 aaKnown RBP16.91■□□□□ 0.3
SNHG1-213ENST00000540725 SEPT4O43236 478 aa16.91■□□□□ 0.3
SNHG1-213ENST00000540725 ZFYP08048 801 aaPredicted RBP16.91■□□□□ 0.3
SNHG1-213ENST00000540725 ATN1P54259 1190 aaPredicted RBP16.91■□□□□ 0.3
SNHG1-213ENST00000540725 LRIT3Q3SXY7 679 aa16.91■□□□□ 0.3
SNHG1-213ENST00000540725 GJC2Q5T442 439 aaPredicted RBP16.91■□□□□ 0.3
SNHG1-213ENST00000540725 ANO1Q5XXA6 986 aa16.91■□□□□ 0.3
SNHG1-213ENST00000540725 RIOX2Q8IUF8 465 aa16.91■□□□□ 0.3
SNHG1-213ENST00000540725 STK11IPQ8N1F8 1099 aa16.91■□□□□ 0.3
SNHG1-213ENST00000540725 ARRDC4Q8NCT1 418 aa16.91■□□□□ 0.3
SNHG1-213ENST00000540725 MKNK2Q9HBH9 465 aa16.91■□□□□ 0.3
SNHG1-213ENST00000540725 VWA5AO00534 786 aa16.9■□□□□ 0.3
SNHG1-213ENST00000540725 GPAA1O43292 621 aa16.9■□□□□ 0.3
SNHG1-213ENST00000540725 MDM2Q00987 491 aaPredicted RBP16.9■□□□□ 0.3
SNHG1-213ENST00000540725 PRAMEF19Q5SWL8 479 aa16.9■□□□□ 0.3
SNHG1-213ENST00000540725 MMP19Q99542 508 aa16.9■□□□□ 0.3
SNHG1-213ENST00000540725 EPB41L4AQ9HCS5 686 aaPredicted RBP16.9■□□□□ 0.3
SNHG1-213ENST00000540725 CUL9Q8IWT3 2517 aa16.9■□□□□ 0.3
SNHG1-213ENST00000540725 LAMA2P24043 3122 aaKnown RBP16.9■□□□□ 0.3
SNHG1-213ENST00000540725 MCM3APO60318 1980 aa16.9■□□□□ 0.3
SNHG1-213ENST00000540725 KBTBD13C9JR72 458 aa16.89■□□□□ 0.3
SNHG1-213ENST00000540725 STAT3P40763 770 aa16.89■□□□□ 0.3
SNHG1-213ENST00000540725 RTP1P59025 263 aa16.89■□□□□ 0.3
SNHG1-213ENST00000540725 GPR153Q6NV75 609 aa16.89■□□□□ 0.3
SNHG1-213ENST00000540725 REPS2Q8NFH8 660 aa16.89■□□□□ 0.3
SNHG1-213ENST00000540725 NUP88Q99567 741 aaPredicted RBP16.89■□□□□ 0.3
SNHG1-213ENST00000540725 NYAP2Q9P242 653 aa16.89■□□□□ 0.3
SNHG1-213ENST00000540725 ZNF214Q9UL59 606 aaPredicted RBP16.89■□□□□ 0.3
SNHG1-213ENST00000540725 M0R2C6 588 aa16.89■□□□□ 0.29
SNHG1-213ENST00000540725 MYCNP04198 464 aaPredicted RBP16.89■□□□□ 0.29
SNHG1-213ENST00000540725 PGK2P07205 417 aa16.89■□□□□ 0.29
SNHG1-213ENST00000540725 GNAT2P19087 354 aa16.89■□□□□ 0.29
SNHG1-213ENST00000540725 COPB2P35606 906 aa16.89■□□□□ 0.29
SNHG1-213ENST00000540725 TDO2P48775 406 aa16.89■□□□□ 0.29
SNHG1-213ENST00000540725 KCTD2Q14681 263 aa16.89■□□□□ 0.29
SNHG1-213ENST00000540725 NDUFB10O96000 172 aa16.88■□□□□ 0.29
SNHG1-213ENST00000540725 APPP05067 770 aa16.88■□□□□ 0.29
SNHG1-213ENST00000540725 LRRFIP1Q32MZ4 808 aaKnown RBP16.88■□□□□ 0.29
SNHG1-213ENST00000540725 FAM47AQ5JRC9 791 aa16.88■□□□□ 0.29
SNHG1-213ENST00000540725 LBHD1Q9BQE6 289 aaPredicted RBP16.88■□□□□ 0.29
SNHG1-213ENST00000540725 SLF1Q9BQI6 1058 aa16.88■□□□□ 0.29
SNHG1-213ENST00000540725 NRBP1Q9UHY1 535 aa16.88■□□□□ 0.29
SNHG1-213ENST00000540725 ATP11BQ9Y2G3 1177 aa16.88■□□□□ 0.29
SNHG1-213ENST00000540725 TTC41PQ6P2S7 1318 aa16.87■□□□□ 0.29
SNHG1-213ENST00000540725 IGKV6D-41A0A0C4DH26 115 aa16.87■□□□□ 0.29
SNHG1-213ENST00000540725 F5H6K3 240 aa16.87■□□□□ 0.29
SNHG1-213ENST00000540725 PRDM1O75626 825 aa16.87■□□□□ 0.29
SNHG1-213ENST00000540725 KLRC3Q07444 240 aa16.87■□□□□ 0.29
SNHG1-213ENST00000540725 LRRC41Q15345 812 aa16.87■□□□□ 0.29
SNHG1-213ENST00000540725 ZNF792Q3KQV3 632 aa16.87■□□□□ 0.29
SNHG1-213ENST00000540725 SLC39A5Q6ZMH5 540 aa16.87■□□□□ 0.29
SNHG1-213ENST00000540725 DEFB123Q8N688 67 aa16.87■□□□□ 0.29
SNHG1-213ENST00000540725 TINF2Q9BSI4 451 aa16.87■□□□□ 0.29
SNHG1-213ENST00000540725 TEX13BQ9BXU2 312 aa16.87■□□□□ 0.29
SNHG1-213ENST00000540725 ZNF287Q9HBT7 754 aa16.87■□□□□ 0.29
SNHG1-213ENST00000540725 CLIP2Q9UDT6 1046 aa16.87■□□□□ 0.29
SNHG1-213ENST00000540725 PRKAG2Q9UGJ0 569 aa16.87■□□□□ 0.29
SNHG1-213ENST00000540725 DIS3Q9Y2L1 958 aaKnown RBP16.87■□□□□ 0.29
SNHG1-213ENST00000540725 PCDHB15Q9Y5E8 787 aa16.87■□□□□ 0.29
SNHG1-213ENST00000540725 ERC2O15083 957 aa16.86■□□□□ 0.29
SNHG1-213ENST00000540725 SNRNP48Q6IEG0 339 aaKnown RBP16.86■□□□□ 0.29
SNHG1-213ENST00000540725 Q7L0L9 218 aa16.86■□□□□ 0.29
SNHG1-213ENST00000540725 IFNL3Q8IZI9 196 aa16.86■□□□□ 0.29
SNHG1-213ENST00000540725 ZNF444Q8N0Y2 327 aaPredicted RBP16.86■□□□□ 0.29
SNHG1-213ENST00000540725 PI4K2BQ8TCG2 481 aa16.86■□□□□ 0.29
SNHG1-213ENST00000540725 A0A0C4DFX4 3053 aa16.86■□□□□ 0.29
SNHG1-213ENST00000540725 PATL2C9JE40 543 aaKnown RBP16.85■□□□□ 0.29
SNHG1-213ENST00000540725 RARBP10826 455 aa16.85■□□□□ 0.29
SNHG1-213ENST00000540725 ADCYAP1R1P41586 468 aa16.85■□□□□ 0.29
SNHG1-213ENST00000540725 PRPF38AQ8NAV1 312 aaKnown RBP16.85■□□□□ 0.29
SNHG1-213ENST00000540725 OTUD7AQ8TE49 926 aaPredicted RBP16.85■□□□□ 0.29
SNHG1-213ENST00000540725 FERMT2Q96AC1 680 aa16.85■□□□□ 0.29
SNHG1-213ENST00000540725 CEP95Q96GE4 821 aa16.85■□□□□ 0.29
SNHG1-213ENST00000540725 SEC62Q99442 399 aaKnown RBP16.85■□□□□ 0.29
SNHG1-213ENST00000540725 FSD1Q9BTV5 496 aa16.85■□□□□ 0.29
SNHG1-213ENST00000540725 NACAP1Q9BZK3 213 aa16.85■□□□□ 0.29
SNHG1-213ENST00000540725 XPNPEP3Q9NQH7 507 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 181.4 ms