RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 ZBTB38Q8NAP3 1195 aaPredicted RBP14.51□□□□□ -0.09
MSH6-210ENST00000540021 TEX13AQ9BXU3 409 aaPredicted RBP14.51□□□□□ -0.09
MSH6-210ENST00000540021 HAUS4Q9H6D7 363 aa14.51□□□□□ -0.09
MSH6-210ENST00000540021 HPSEQ9Y251 543 aa14.51□□□□□ -0.09
MSH6-210ENST00000540021 PARP1P09874 1014 aaKnown RBP14.51□□□□□ -0.09
MSH6-210ENST00000540021 CFAP58Q5T655 872 aa14.51□□□□□ -0.09
MSH6-210ENST00000540021 TAX1BP1Q86VP1 789 aa14.51□□□□□ -0.09
MSH6-210ENST00000540021 ASAP1Q9ULH1 1129 aa14.51□□□□□ -0.09
MSH6-210ENST00000540021 BAZ2BQ9UIF8 2168 aaKnown RBP14.51□□□□□ -0.09
MSH6-210ENST00000540021 IL2RBP14784 551 aa14.51□□□□□ -0.09
MSH6-210ENST00000540021 KIF5BP33176 963 aa14.51□□□□□ -0.09
MSH6-210ENST00000540021 VAV2P52735 878 aa14.51□□□□□ -0.09
MSH6-210ENST00000540021 SEPT11Q9NVA2 429 aaKnown RBP14.51□□□□□ -0.09
MSH6-210ENST00000540021 JRKLQ9Y4A0 524 aa14.51□□□□□ -0.09
MSH6-210ENST00000540021 BUB1O43683 1085 aa14.5□□□□□ -0.09
MSH6-210ENST00000540021 PEAK1Q9H792 1746 aa14.5□□□□□ -0.09
MSH6-210ENST00000540021 A0A1B0GTH6 734 aa14.5□□□□□ -0.09
MSH6-210ENST00000540021 DZIP1Q86YF9 867 aaKnown RBP14.5□□□□□ -0.09
MSH6-210ENST00000540021 TTLL11Q8NHH1 800 aa14.5□□□□□ -0.09
MSH6-210ENST00000540021 GIMAP7Q8NHV1 300 aa14.5□□□□□ -0.09
MSH6-210ENST00000540021 PYM1Q9BRP8 204 aaKnown RBP14.5□□□□□ -0.09
MSH6-210ENST00000540021 IFIH1Q9BYX4 1025 aaKnown RBP14.5□□□□□ -0.09
MSH6-210ENST00000540021 CCDC113Q9H0I3 377 aa14.5□□□□□ -0.09
MSH6-210ENST00000540021 NLRC4Q9NPP4 1024 aa14.5□□□□□ -0.09
MSH6-210ENST00000540021 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.5□□□□□ -0.09
MSH6-210ENST00000540021 PCDH11XQ9BZA7 1347 aa14.5□□□□□ -0.09
MSH6-210ENST00000540021 PCDH11YQ9BZA8 1340 aa14.5□□□□□ -0.09
MSH6-210ENST00000540021 PCCAP05165 728 aaPredicted RBP14.5□□□□□ -0.09
MSH6-210ENST00000540021 GGCXP38435 758 aa14.5□□□□□ -0.09
MSH6-210ENST00000540021 LIFRP42702 1097 aa14.5□□□□□ -0.09
MSH6-210ENST00000540021 RASGRF1Q13972 1273 aa14.5□□□□□ -0.09
MSH6-210ENST00000540021 DYMQ7RTS9 669 aa14.5□□□□□ -0.09
MSH6-210ENST00000540021 FAM114A1Q8IWE2 563 aa14.5□□□□□ -0.09
MSH6-210ENST00000540021 IGDCC4Q8TDY8 1250 aa14.5□□□□□ -0.09
MSH6-210ENST00000540021 MAP3K14Q99558 947 aa14.5□□□□□ -0.09
MSH6-210ENST00000540021 SOS2Q07890 1332 aaPredicted RBP14.49□□□□□ -0.09
MSH6-210ENST00000540021 GOLGA6L7A0A1B0GV03 622 aa14.49□□□□□ -0.09
MSH6-210ENST00000540021 USP17L12C9JPN9 530 aa14.49□□□□□ -0.09
MSH6-210ENST00000540021 USP17L21D6R901 530 aa14.49□□□□□ -0.09
MSH6-210ENST00000540021 GYPCP04921 128 aa14.49□□□□□ -0.09
MSH6-210ENST00000540021 ATP1A1P05023 1023 aaKnown RBP14.49□□□□□ -0.09
MSH6-210ENST00000540021 CD44P16070 742 aaKnown RBP14.49□□□□□ -0.09
MSH6-210ENST00000540021 HLFQ16534 295 aa14.49□□□□□ -0.09
MSH6-210ENST00000540021 BEND6Q5SZJ8 279 aaPredicted RBP14.49□□□□□ -0.09
MSH6-210ENST00000540021 CEP57Q86XR8 500 aa14.49□□□□□ -0.09
MSH6-210ENST00000540021 SEC31BQ9NQW1 1179 aa14.49□□□□□ -0.09
MSH6-210ENST00000540021 MCM9Q9NXL9 1143 aa14.49□□□□□ -0.09
MSH6-210ENST00000540021 ZNF185O15231 689 aa14.49□□□□□ -0.09
MSH6-210ENST00000540021 GYG1P46976 350 aa14.49□□□□□ -0.09
MSH6-210ENST00000540021 ZNF444Q8N0Y2 327 aaPredicted RBP14.49□□□□□ -0.09
MSH6-210ENST00000540021 CALML4Q96GE6 196 aa14.49□□□□□ -0.09
MSH6-210ENST00000540021 CAPS2Q9BXY5 557 aa14.49□□□□□ -0.09
MSH6-210ENST00000540021 UBA5Q9GZZ9 404 aa14.49□□□□□ -0.09
MSH6-210ENST00000540021 GOPCQ9HD26 462 aa14.49□□□□□ -0.09
MSH6-210ENST00000540021 TTC26A0AVF1 554 aa14.49□□□□□ -0.09
MSH6-210ENST00000540021 PDE8AO60658 829 aa14.49□□□□□ -0.09
MSH6-210ENST00000540021 PRPF4BQ13523 1007 aaKnown RBP14.49□□□□□ -0.09
MSH6-210ENST00000540021 RSRC2Q7L4I2 434 aaKnown RBP14.49□□□□□ -0.09
MSH6-210ENST00000540021 MMS19Q96T76 1030 aa14.49□□□□□ -0.09
MSH6-210ENST00000540021 AATFQ9NY61 560 aaKnown RBP eCLIP14.49□□□□□ -0.09
MSH6-210ENST00000540021 ADD3Q9UEY8 706 aaKnown RBP14.49□□□□□ -0.09
MSH6-210ENST00000540021 MAGEA1P43355 309 aa14.48□□□□□ -0.09
MSH6-210ENST00000540021 TOB1P50616 345 aaPredicted RBP14.48□□□□□ -0.09
MSH6-210ENST00000540021 RRAGAQ7L523 313 aa14.48□□□□□ -0.09
MSH6-210ENST00000540021 ANKZF1Q9H8Y5 726 aa14.48□□□□□ -0.09
MSH6-210ENST00000540021 NIP7Q9Y221 180 aaKnown RBP eCLIP14.48□□□□□ -0.09
MSH6-210ENST00000540021 CAPN7Q9Y6W3 813 aa14.48□□□□□ -0.09
MSH6-210ENST00000540021 HEG1Q9ULI3 1381 aa14.48□□□□□ -0.09
MSH6-210ENST00000540021 IFFO1Q0D2I5 559 aa14.48□□□□□ -0.09
MSH6-210ENST00000540021 TCP11X2Q5H9J9 407 aa14.48□□□□□ -0.09
MSH6-210ENST00000540021 SPTY2D1Q68D10 685 aaPredicted RBP14.48□□□□□ -0.09
MSH6-210ENST00000540021 KLHL7Q8IXQ5 586 aa14.48□□□□□ -0.09
MSH6-210ENST00000540021 ZSCAN10Q96SZ4 725 aaPredicted RBP14.48□□□□□ -0.09
MSH6-210ENST00000540021 NCAPD2Q15021 1401 aa14.48□□□□□ -0.09
MSH6-210ENST00000540021 GTPBP6O43824 516 aaPredicted RBP14.48□□□□□ -0.09
MSH6-210ENST00000540021 ABL1P00519 1130 aa14.48□□□□□ -0.09
MSH6-210ENST00000540021 NAPAP54920 295 aa14.48□□□□□ -0.09
MSH6-210ENST00000540021 INF2Q27J81 1249 aa14.48□□□□□ -0.09
MSH6-210ENST00000540021 CCDC152Q4G0S7 254 aa14.48□□□□□ -0.09
MSH6-210ENST00000540021 TUBGCP2Q9BSJ2 902 aa14.48□□□□□ -0.09
MSH6-210ENST00000540021 LRWD1Q9UFC0 647 aa14.48□□□□□ -0.09
MSH6-210ENST00000540021 CPDO75976 1380 aa14.48□□□□□ -0.09
MSH6-210ENST00000540021 SPATA31D1Q6ZQQ2 1576 aa14.48□□□□□ -0.09
MSH6-210ENST00000540021 DYNLL1P63167 89 aaKnown RBP14.47□□□□□ -0.09
MSH6-210ENST00000540021 TCERG1LQ5VWI1 586 aa14.47□□□□□ -0.09
MSH6-210ENST00000540021 SMCR8Q8TEV9 937 aaPredicted RBP14.47□□□□□ -0.09
MSH6-210ENST00000540021 KIFC2Q96AC6 838 aa14.47□□□□□ -0.09
MSH6-210ENST00000540021 SEC63Q9UGP8 760 aaKnown RBP14.47□□□□□ -0.09
MSH6-210ENST00000540021 NUTM2BA6NNL0 878 aaPredicted RBP14.47□□□□□ -0.09
MSH6-210ENST00000540021 LRRIQ3A6PVS8 624 aaPredicted RBP14.47□□□□□ -0.09
MSH6-210ENST00000540021 NUTM2EB1AL46 878 aaPredicted RBP14.47□□□□□ -0.09
MSH6-210ENST00000540021 SELENOOQ9BVL4 669 aa14.47□□□□□ -0.09
MSH6-210ENST00000540021 PP2D1A8MPX8 630 aa14.47□□□□□ -0.09
MSH6-210ENST00000540021 H7C1D1 291 aa14.47□□□□□ -0.09
MSH6-210ENST00000540021 ACTN4O43707 911 aaKnown RBP14.47□□□□□ -0.09
MSH6-210ENST00000540021 CALM1P0DP23 149 aa14.47□□□□□ -0.09
MSH6-210ENST00000540021 CALM2P0DP24 149 aa14.47□□□□□ -0.09
MSH6-210ENST00000540021 CALM3P0DP25 149 aa14.47□□□□□ -0.09
MSH6-210ENST00000540021 CALML3P27482 149 aa14.47□□□□□ -0.09
MSH6-210ENST00000540021 PRCPP42785 496 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms