RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 CCDC171Q6TFL3 1326 aa14.27□□□□□ -0.13
DDX55-206ENST00000539934 IFIT1P09914 478 aaKnown RBP14.26□□□□□ -0.13
DDX55-206ENST00000539934 MCM2P49736 904 aa14.26□□□□□ -0.13
DDX55-206ENST00000539934 PTH1RQ03431 593 aa14.26□□□□□ -0.13
DDX55-206ENST00000539934 AKNAD1Q5T1N1 836 aa14.26□□□□□ -0.13
DDX55-206ENST00000539934 TCP11Q8WWU5 503 aa14.26□□□□□ -0.13
DDX55-206ENST00000539934 IL17RAQ96F46 866 aa14.26□□□□□ -0.13
DDX55-206ENST00000539934 NACA2Q9H009 215 aa14.26□□□□□ -0.13
DDX55-206ENST00000539934 RFX7Q2KHR2 1363 aa14.26□□□□□ -0.13
DDX55-206ENST00000539934 EIF3CLB5ME19 914 aaKnown RBP14.26□□□□□ -0.13
DDX55-206ENST00000539934 HCLS1P14317 486 aaPredicted RBP14.26□□□□□ -0.13
DDX55-206ENST00000539934 DDIT3P35638 169 aa14.26□□□□□ -0.13
DDX55-206ENST00000539934 MRPL12P52815 198 aaKnown RBP14.26□□□□□ -0.13
DDX55-206ENST00000539934 HUNKP57058 714 aa14.26□□□□□ -0.13
DDX55-206ENST00000539934 PREPLQ4J6C6 727 aaPredicted RBP14.26□□□□□ -0.13
DDX55-206ENST00000539934 CCDC158Q5M9N0 1113 aa14.26□□□□□ -0.13
DDX55-206ENST00000539934 USP48Q86UV5 1035 aa14.26□□□□□ -0.13
DDX55-206ENST00000539934 EIF3CQ99613 913 aaKnown RBP14.26□□□□□ -0.13
DDX55-206ENST00000539934 UPF3BQ9BZI7 483 aaKnown RBP14.26□□□□□ -0.13
DDX55-206ENST00000539934 PCDH10Q9P2E7 1040 aa14.26□□□□□ -0.13
DDX55-206ENST00000539934 SNX14Q9Y5W7 946 aa14.26□□□□□ -0.13
DDX55-206ENST00000539934 HTTP42858 3142 aa14.26□□□□□ -0.13
DDX55-206ENST00000539934 DDX60Q8IY21 1712 aaKnown RBP14.26□□□□□ -0.13
DDX55-206ENST00000539934 LAMB2P55268 1798 aa14.25□□□□□ -0.13
DDX55-206ENST00000539934 RIC1Q4ADV7 1423 aa14.25□□□□□ -0.13
DDX55-206ENST00000539934 HARSP12081 509 aaKnown RBP14.25□□□□□ -0.13
DDX55-206ENST00000539934 ARL10Q8N8L6 244 aa14.25□□□□□ -0.13
DDX55-206ENST00000539934 MRFAP1L1Q96HT8 127 aa14.25□□□□□ -0.13
DDX55-206ENST00000539934 FAM81BQ96LP2 452 aa14.25□□□□□ -0.13
DDX55-206ENST00000539934 NYXQ9GZU5 481 aa14.25□□□□□ -0.13
DDX55-206ENST00000539934 PAG1Q9NWQ8 432 aa14.25□□□□□ -0.13
DDX55-206ENST00000539934 MCM8Q9UJA3 840 aa14.25□□□□□ -0.13
DDX55-206ENST00000539934 IQCB1Q15051 598 aa14.25□□□□□ -0.13
DDX55-206ENST00000539934 TTC39AQ5SRH9 613 aa14.25□□□□□ -0.13
DDX55-206ENST00000539934 FILIP1Q7Z7B0 1213 aa14.25□□□□□ -0.13
DDX55-206ENST00000539934 KBTBD3Q8NAB2 608 aa14.25□□□□□ -0.13
DDX55-206ENST00000539934 XAGE2Q96GT9 111 aa14.25□□□□□ -0.13
DDX55-206ENST00000539934 DUSP9Q99956 384 aaKnown RBP14.25□□□□□ -0.13
DDX55-206ENST00000539934 SPEF2Q9C093 1822 aa14.24□□□□□ -0.13
DDX55-206ENST00000539934 MED23Q9ULK4 1368 aa14.24□□□□□ -0.13
DDX55-206ENST00000539934 BICDL2A1A5D9 508 aa14.24□□□□□ -0.13
DDX55-206ENST00000539934 EGFRP00533 1210 aa14.24□□□□□ -0.13
DDX55-206ENST00000539934 MNAT1P51948 309 aa14.24□□□□□ -0.13
DDX55-206ENST00000539934 PPP4CP60510 307 aa14.24□□□□□ -0.13
DDX55-206ENST00000539934 ZBED6P86452 979 aa14.24□□□□□ -0.13
DDX55-206ENST00000539934 PTK7Q13308 1070 aa14.24□□□□□ -0.13
DDX55-206ENST00000539934 ARMC3Q5W041 872 aa14.24□□□□□ -0.13
DDX55-206ENST00000539934 CCDC80Q76M96 950 aa14.24□□□□□ -0.13
DDX55-206ENST00000539934 SAMD7Q7Z3H4 446 aa14.24□□□□□ -0.13
DDX55-206ENST00000539934 C3orf20Q8ND61 904 aa14.24□□□□□ -0.13
DDX55-206ENST00000539934 KCNN1Q92952 543 aa14.24□□□□□ -0.13
DDX55-206ENST00000539934 RSPH9Q9H1X1 276 aaPredicted RBP14.24□□□□□ -0.13
DDX55-206ENST00000539934 SNRKQ9NRH2 765 aa14.24□□□□□ -0.13
DDX55-206ENST00000539934 ZNRF3Q9ULT6 936 aa14.24□□□□□ -0.13
DDX55-206ENST00000539934 ATP8A1Q9Y2Q0 1164 aa14.24□□□□□ -0.13
DDX55-206ENST00000539934 EME2A4GXA9 379 aaPredicted RBP14.23□□□□□ -0.13
DDX55-206ENST00000539934 TRPA1O75762 1119 aa14.23□□□□□ -0.13
DDX55-206ENST00000539934 NTSR2O95665 410 aa14.23□□□□□ -0.13
DDX55-206ENST00000539934 ADORA1P30542 326 aa14.23□□□□□ -0.13
DDX55-206ENST00000539934 MYSM1Q5VVJ2 828 aa14.23□□□□□ -0.13
DDX55-206ENST00000539934 RASEFQ8IZ41 740 aa14.23□□□□□ -0.13
DDX55-206ENST00000539934 TBC1D7Q9P0N9 293 aa14.23□□□□□ -0.13
DDX55-206ENST00000539934 RABL2AQ9UBK7 228 aaPredicted RBP14.23□□□□□ -0.13
DDX55-206ENST00000539934 RBM8AQ9Y5S9 174 aaKnown RBP14.23□□□□□ -0.13
DDX55-206ENST00000539934 E2F6O75461 281 aa14.23□□□□□ -0.13
DDX55-206ENST00000539934 ZKSCAN1P17029 563 aaPredicted RBP14.23□□□□□ -0.13
DDX55-206ENST00000539934 CYP11B2P19099 503 aa14.23□□□□□ -0.13
DDX55-206ENST00000539934 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.23□□□□□ -0.13
DDX55-206ENST00000539934 MAP4K1Q92918 833 aa14.23□□□□□ -0.13
DDX55-206ENST00000539934 HOMER3Q9NSC5 361 aa14.23□□□□□ -0.13
DDX55-206ENST00000539934 RTN3O95197 1032 aaPredicted RBP14.22□□□□□ -0.13
DDX55-206ENST00000539934 CCDC152Q4G0S7 254 aa14.22□□□□□ -0.13
DDX55-206ENST00000539934 SDCCAG8Q86SQ7 713 aaPredicted RBP14.22□□□□□ -0.13
DDX55-206ENST00000539934 ZNF589Q86UQ0 364 aaPredicted RBP14.22□□□□□ -0.13
DDX55-206ENST00000539934 TMX3Q96JJ7 454 aa14.22□□□□□ -0.13
DDX55-206ENST00000539934 CNOT7Q9UIV1 285 aaKnown RBP14.22□□□□□ -0.13
DDX55-206ENST00000539934 SMTNL1A8MU46 457 aa14.22□□□□□ -0.13
DDX55-206ENST00000539934 CA12O43570 354 aa14.22□□□□□ -0.13
DDX55-206ENST00000539934 NECTIN1Q15223 517 aa14.22□□□□□ -0.13
DDX55-206ENST00000539934 CTCFLQ8NI51 663 aaPredicted RBP14.22□□□□□ -0.13
DDX55-206ENST00000539934 MPHOSPH8Q99549 860 aa14.22□□□□□ -0.13
DDX55-206ENST00000539934 N6AMT1Q9Y5N5 214 aa14.22□□□□□ -0.13
DDX55-206ENST00000539934 POLR2AP24928 1970 aaKnown RBP14.22□□□□□ -0.13
DDX55-206ENST00000539934 YDJCA8MPS7 323 aa14.21□□□□□ -0.13
DDX55-206ENST00000539934 RPS6KA5O75582 802 aa14.21□□□□□ -0.13
DDX55-206ENST00000539934 MCMDC2Q4G0Z9 681 aa14.21□□□□□ -0.13
DDX55-206ENST00000539934 RNF20Q5VTR2 975 aa14.21□□□□□ -0.13
DDX55-206ENST00000539934 DPP8Q6V1X1 898 aaPredicted RBP14.21□□□□□ -0.13
DDX55-206ENST00000539934 MICALL2Q8IY33 904 aa14.21□□□□□ -0.13
DDX55-206ENST00000539934 CCDC82Q8N4S0 544 aa14.21□□□□□ -0.13
DDX55-206ENST00000539934 EZH1Q92800 747 aaPredicted RBP14.21□□□□□ -0.13
DDX55-206ENST00000539934 CRAMP1Q96RY5 1269 aa14.21□□□□□ -0.13
DDX55-206ENST00000539934 ATP6V0A2Q9Y487 856 aa14.21□□□□□ -0.13
DDX55-206ENST00000539934 TAF1P21675 1872 aa14.21□□□□□ -0.13
DDX55-206ENST00000539934 ADM5C9JUS6 153 aa14.21□□□□□ -0.14
DDX55-206ENST00000539934 PDE8BO95263 885 aa14.21□□□□□ -0.14
DDX55-206ENST00000539934 MMEP08473 750 aa14.21□□□□□ -0.14
DDX55-206ENST00000539934 CASTP20810 708 aaKnown RBP14.21□□□□□ -0.14
DDX55-206ENST00000539934 NOGQ13253 232 aa14.21□□□□□ -0.14
DDX55-206ENST00000539934 RAB3GAP1Q15042 981 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms