RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 NR5A1Q13285 461 aa19.62■□□□□ 0.73
PCDHB17P-201ENST00000539533 SAFBQ15424 915 aaKnown RBP eCLIP19.62■□□□□ 0.73
PCDHB17P-201ENST00000539533 SHROOM1Q2M3G4 852 aaPredicted RBP19.62■□□□□ 0.73
PCDHB17P-201ENST00000539533 ZNF70Q9UC06 446 aaPredicted RBP19.62■□□□□ 0.73
PCDHB17P-201ENST00000539533 USP17L2Q6R6M4 530 aa19.61■□□□□ 0.73
PCDHB17P-201ENST00000539533 LINC00301Q8NCQ3 95 aa19.61■□□□□ 0.73
PCDHB17P-201ENST00000539533 CPVLQ9H3G5 476 aa19.61■□□□□ 0.73
PCDHB17P-201ENST00000539533 CLIP2Q9UDT6 1046 aa19.61■□□□□ 0.73
PCDHB17P-201ENST00000539533 CYTH3O43739 400 aa19.61■□□□□ 0.73
PCDHB17P-201ENST00000539533 TYRO3Q06418 890 aa19.61■□□□□ 0.73
PCDHB17P-201ENST00000539533 NOSTRINQ8IVI9 506 aa19.61■□□□□ 0.73
PCDHB17P-201ENST00000539533 LRRC47Q8N1G4 583 aaKnown RBP19.61■□□□□ 0.73
PCDHB17P-201ENST00000539533 POLR3EQ9NVU0 708 aa19.61■□□□□ 0.73
PCDHB17P-201ENST00000539533 MRVI1Q9Y6F6 885 aa19.61■□□□□ 0.73
PCDHB17P-201ENST00000539533 SCG2P13521 617 aa19.6■□□□□ 0.73
PCDHB17P-201ENST00000539533 XBP1P17861 261 aa19.6■□□□□ 0.73
PCDHB17P-201ENST00000539533 CBX1P83916 185 aa19.6■□□□□ 0.73
PCDHB17P-201ENST00000539533 CAMK4Q16566 473 aa19.6■□□□□ 0.73
PCDHB17P-201ENST00000539533 ANO1Q5XXA6 986 aa19.6■□□□□ 0.73
PCDHB17P-201ENST00000539533 FOXP4Q8IVH2 680 aaPredicted RBP19.6■□□□□ 0.73
PCDHB17P-201ENST00000539533 BICD2Q8TD16 824 aa19.6■□□□□ 0.73
PCDHB17P-201ENST00000539533 PHF20Q9BVI0 1012 aa19.6■□□□□ 0.73
PCDHB17P-201ENST00000539533 TMOD2Q9NZR1 351 aa19.6■□□□□ 0.73
PCDHB17P-201ENST00000539533 ATRNL1Q5VV63 1379 aa19.6■□□□□ 0.73
PCDHB17P-201ENST00000539533 USP17L5A8MUK1 530 aa19.59■□□□□ 0.73
PCDHB17P-201ENST00000539533 ME1P48163 572 aa19.59■□□□□ 0.73
PCDHB17P-201ENST00000539533 GNAQP50148 359 aa19.59■□□□□ 0.73
PCDHB17P-201ENST00000539533 STK38Q15208 465 aa19.59■□□□□ 0.73
PCDHB17P-201ENST00000539533 PFKFB3Q16875 520 aaPredicted RBP19.59■□□□□ 0.73
PCDHB17P-201ENST00000539533 TRIM34Q9BYJ4 488 aa19.59■□□□□ 0.73
PCDHB17P-201ENST00000539533 FOXP1Q9H334 677 aaPredicted RBP19.59■□□□□ 0.73
PCDHB17P-201ENST00000539533 KLRF2D3W0D1 207 aa19.59■□□□□ 0.73
PCDHB17P-201ENST00000539533 TTLL1O95922 423 aa19.59■□□□□ 0.73
PCDHB17P-201ENST00000539533 PARP1P09874 1014 aaKnown RBP19.59■□□□□ 0.73
PCDHB17P-201ENST00000539533 SPDYE2Q495Y8 402 aa19.59■□□□□ 0.73
PCDHB17P-201ENST00000539533 CERKLQ49MI3 558 aaPredicted RBP19.59■□□□□ 0.73
PCDHB17P-201ENST00000539533 CSRNP1Q96S65 589 aa19.59■□□□□ 0.73
PCDHB17P-201ENST00000539533 PCDHA7Q9UN72 937 aa19.59■□□□□ 0.73
PCDHB17P-201ENST00000539533 SF3A1Q15459 793 aaKnown RBP19.58■□□□□ 0.73
PCDHB17P-201ENST00000539533 TATDN1Q6P1N9 297 aa19.58■□□□□ 0.73
PCDHB17P-201ENST00000539533 CCDC17Q96LX7 622 aa19.58■□□□□ 0.73
PCDHB17P-201ENST00000539533 VEZTQ9HBM0 779 aa19.58■□□□□ 0.73
PCDHB17P-201ENST00000539533 ATP2B2Q01814 1243 aa19.58■□□□□ 0.72
PCDHB17P-201ENST00000539533 TNIP1Q15025 636 aa19.58■□□□□ 0.72
PCDHB17P-201ENST00000539533 NBPF9Q3BBW0 867 aa19.58■□□□□ 0.72
PCDHB17P-201ENST00000539533 LUZP1Q86V48 1076 aa19.58■□□□□ 0.72
PCDHB17P-201ENST00000539533 METTL16Q86W50 562 aaKnown RBP19.58■□□□□ 0.72
PCDHB17P-201ENST00000539533 TNMDQ9H2S6 317 aa19.58■□□□□ 0.72
PCDHB17P-201ENST00000539533 DACT1Q9NYF0 836 aa19.58■□□□□ 0.72
PCDHB17P-201ENST00000539533 LTBP3Q9NS15 1303 aa19.58■□□□□ 0.72
PCDHB17P-201ENST00000539533 YEATS4O95619 227 aa19.57■□□□□ 0.72
PCDHB17P-201ENST00000539533 PDHBP11177 359 aa19.57■□□□□ 0.72
PCDHB17P-201ENST00000539533 NPY5RQ15761 445 aa19.57■□□□□ 0.72
PCDHB17P-201ENST00000539533 MTMR14Q8NCE2 650 aa19.57■□□□□ 0.72
PCDHB17P-201ENST00000539533 GPKOWQ92917 476 aaPredicted RBP eCLIP19.57■□□□□ 0.72
PCDHB17P-201ENST00000539533 SPON1Q9HCB6 807 aa19.57■□□□□ 0.72
PCDHB17P-201ENST00000539533 CNTNAP1P78357 1384 aa19.57■□□□□ 0.72
PCDHB17P-201ENST00000539533 WNT10BO00744 389 aa19.57■□□□□ 0.72
PCDHB17P-201ENST00000539533 SPTLC2O15270 562 aa19.57■□□□□ 0.72
PCDHB17P-201ENST00000539533 NR1I2O75469 434 aa19.57■□□□□ 0.72
PCDHB17P-201ENST00000539533 TOB1P50616 345 aaPredicted RBP19.57■□□□□ 0.72
PCDHB17P-201ENST00000539533 PPP4R3BQ5MIZ7 849 aa19.57■□□□□ 0.72
PCDHB17P-201ENST00000539533 CKAP2LQ8IYA6 745 aa19.57■□□□□ 0.72
PCDHB17P-201ENST00000539533 MYOZ2Q9NPC6 264 aa19.57■□□□□ 0.72
PCDHB17P-201ENST00000539533 GREB1LQ9C091 1923 aaPredicted RBP19.56■□□□□ 0.72
PCDHB17P-201ENST00000539533 FRMPD2Q68DX3 1309 aaPredicted RBP19.56■□□□□ 0.72
PCDHB17P-201ENST00000539533 GDF11O95390 407 aa19.56■□□□□ 0.72
PCDHB17P-201ENST00000539533 PTGS1P23219 599 aa19.56■□□□□ 0.72
PCDHB17P-201ENST00000539533 CCAR1Q8IX12 1150 aaKnown RBP19.56■□□□□ 0.72
PCDHB17P-201ENST00000539533 FAM151AQ8WW52 585 aa19.56■□□□□ 0.72
PCDHB17P-201ENST00000539533 ZBED3Q96IU2 234 aaPredicted RBP19.56■□□□□ 0.72
PCDHB17P-201ENST00000539533 LZTS2Q9BRK4 669 aa19.56■□□□□ 0.72
PCDHB17P-201ENST00000539533 CABP5Q9NP86 173 aa19.56■□□□□ 0.72
PCDHB17P-201ENST00000539533 EGFRP00533 1210 aa19.56■□□□□ 0.72
PCDHB17P-201ENST00000539533 KRT2P35908 639 aa19.56■□□□□ 0.72
PCDHB17P-201ENST00000539533 RRP1BQ14684 758 aaKnown RBP19.56■□□□□ 0.72
PCDHB17P-201ENST00000539533 SLC39A14Q15043 492 aa19.56■□□□□ 0.72
PCDHB17P-201ENST00000539533 EARS2Q5JPH6 523 aaKnown RBP19.56■□□□□ 0.72
PCDHB17P-201ENST00000539533 CDAN1Q8IWY9 1227 aa19.56■□□□□ 0.72
PCDHB17P-201ENST00000539533 KCNG4Q8TDN1 519 aa19.56■□□□□ 0.72
PCDHB17P-201ENST00000539533 UBA5Q9GZZ9 404 aa19.56■□□□□ 0.72
PCDHB17P-201ENST00000539533 CBX8Q9HC52 389 aa19.56■□□□□ 0.72
PCDHB17P-201ENST00000539533 DDX19AQ9NUU7 478 aaKnown RBP19.56■□□□□ 0.72
PCDHB17P-201ENST00000539533 FAM205CA6NFA0 338 aa19.55■□□□□ 0.72
PCDHB17P-201ENST00000539533 RIOK3O14730 519 aaKnown RBP19.55■□□□□ 0.72
PCDHB17P-201ENST00000539533 ADAMTS3O15072 1205 aa19.55■□□□□ 0.72
PCDHB17P-201ENST00000539533 MARCKSP29966 332 aaPredicted RBP19.55■□□□□ 0.72
PCDHB17P-201ENST00000539533 JAG1P78504 1218 aa19.55■□□□□ 0.72
PCDHB17P-201ENST00000539533 ANO6Q4KMQ2 910 aa19.55■□□□□ 0.72
PCDHB17P-201ENST00000539533 RBM26Q5T8P6 1007 aaKnown RBP19.55■□□□□ 0.72
PCDHB17P-201ENST00000539533 GOLPH3LQ9H4A5 285 aa19.55■□□□□ 0.72
PCDHB17P-201ENST00000539533 VAT1LQ9HCJ6 419 aa19.55■□□□□ 0.72
PCDHB17P-201ENST00000539533 SCAF8Q9UPN6 1271 aaKnown RBP19.55■□□□□ 0.72
PCDHB17P-201ENST00000539533 NLRP5P59047 1200 aa19.55■□□□□ 0.72
PCDHB17P-201ENST00000539533 SEPT2Q15019 361 aa19.55■□□□□ 0.72
PCDHB17P-201ENST00000539533 PTPAQ15257 358 aa19.55■□□□□ 0.72
PCDHB17P-201ENST00000539533 RBM43Q6ZSC3 357 aaKnown RBP19.55■□□□□ 0.72
PCDHB17P-201ENST00000539533 TMEM39BQ9GZU3 492 aa19.55■□□□□ 0.72
PCDHB17P-201ENST00000539533 GJA3Q9Y6H8 435 aa19.55■□□□□ 0.72
PCDHB17P-201ENST00000539533 COL2A1P02458 1487 aaPredicted RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms