RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 TMC7Q7Z402 723 aa3.91□□□□□ -1.78
CBX3P4-201ENST00000538909 DDX1Q92499 740 aaKnown RBP3.91□□□□□ -1.78
CBX3P4-201ENST00000538909 MAP6Q96JE9 813 aa3.91□□□□□ -1.78
CBX3P4-201ENST00000538909 MRIQ9BWK5 157 aa3.91□□□□□ -1.78
CBX3P4-201ENST00000538909 RBCK1Q9BYM8 510 aa3.91□□□□□ -1.78
CBX3P4-201ENST00000538909 OSBPL7Q9BZF2 842 aa3.91□□□□□ -1.78
CBX3P4-201ENST00000538909 PCDHB5Q9Y5E4 795 aa3.91□□□□□ -1.78
CBX3P4-201ENST00000538909 PCDHA5Q9Y5H7 936 aa3.91□□□□□ -1.78
CBX3P4-201ENST00000538909 RBM47A0AV96 593 aaKnown RBP3.9□□□□□ -1.79
CBX3P4-201ENST00000538909 UPK3BL1B0FP48 263 aa3.9□□□□□ -1.79
CBX3P4-201ENST00000538909 UPK3BL2E5RIL1 263 aa3.9□□□□□ -1.79
CBX3P4-201ENST00000538909 FKTNO75072 461 aa3.9□□□□□ -1.79
CBX3P4-201ENST00000538909 MPOP05164 745 aa3.9□□□□□ -1.79
CBX3P4-201ENST00000538909 C6P13671 934 aa3.9□□□□□ -1.79
CBX3P4-201ENST00000538909 LMNB1P20700 586 aa3.9□□□□□ -1.79
CBX3P4-201ENST00000538909 CNR2P34972 360 aa3.9□□□□□ -1.79
CBX3P4-201ENST00000538909 TNNI2P48788 182 aa3.9□□□□□ -1.79
CBX3P4-201ENST00000538909 MCATQ8IVS2 390 aaKnown RBP3.9□□□□□ -1.79
CBX3P4-201ENST00000538909 CYB5D2Q8WUJ1 264 aa3.9□□□□□ -1.79
CBX3P4-201ENST00000538909 RNF141Q8WVD5 230 aa3.9□□□□□ -1.79
CBX3P4-201ENST00000538909 ACSF2Q96CM8 615 aaPredicted RBP3.9□□□□□ -1.79
CBX3P4-201ENST00000538909 HHIPL1Q96JK4 782 aa3.9□□□□□ -1.79
CBX3P4-201ENST00000538909 FOXP3Q9BZS1 431 aa3.9□□□□□ -1.79
CBX3P4-201ENST00000538909 TACC3Q9Y6A5 838 aa3.9□□□□□ -1.79
CBX3P4-201ENST00000538909 SLPIP03973 132 aa3.89□□□□□ -1.79
CBX3P4-201ENST00000538909 KIR2DL1P43626 348 aaPredicted RBP3.89□□□□□ -1.79
CBX3P4-201ENST00000538909 KIR2DL2P43627 348 aaPredicted RBP3.89□□□□□ -1.79
CBX3P4-201ENST00000538909 ERVFRD-1P60508 538 aa3.89□□□□□ -1.79
CBX3P4-201ENST00000538909 PDE4BQ07343 736 aa3.89□□□□□ -1.79
CBX3P4-201ENST00000538909 ENOX2Q16206 610 aaKnown RBP3.89□□□□□ -1.79
CBX3P4-201ENST00000538909 CRB2Q5IJ48 1285 aa3.89□□□□□ -1.79
CBX3P4-201ENST00000538909 ZPBP2Q6X784 338 aa3.89□□□□□ -1.79
CBX3P4-201ENST00000538909 ZFPM1Q8IX07 1006 aa3.89□□□□□ -1.79
CBX3P4-201ENST00000538909 FAM13CQ8NE31 585 aa3.89□□□□□ -1.79
CBX3P4-201ENST00000538909 SETDB2Q96T68 719 aa3.89□□□□□ -1.79
CBX3P4-201ENST00000538909 SUSD2Q9UGT4 822 aa3.89□□□□□ -1.79
CBX3P4-201ENST00000538909 ZNF281Q9Y2X9 895 aa3.89□□□□□ -1.79
CBX3P4-201ENST00000538909 DUSP10Q9Y6W6 482 aa3.89□□□□□ -1.79
CBX3P4-201ENST00000538909 ARID3CA6NKF2 412 aa3.88□□□□□ -1.79
CBX3P4-201ENST00000538909 GDF5P43026 501 aa3.88□□□□□ -1.79
CBX3P4-201ENST00000538909 RTP1P59025 263 aa3.88□□□□□ -1.79
CBX3P4-201ENST00000538909 CPZQ66K79 652 aa3.88□□□□□ -1.79
CBX3P4-201ENST00000538909 RNF111Q6ZNA4 994 aa3.88□□□□□ -1.79
CBX3P4-201ENST00000538909 C8orf49Q96NF6 230 aa3.88□□□□□ -1.79
CBX3P4-201ENST00000538909 SRCIN1Q9C0H9 1055 aa3.88□□□□□ -1.79
CBX3P4-201ENST00000538909 TTF2Q9UNY4 1162 aaKnown RBP3.88□□□□□ -1.79
CBX3P4-201ENST00000538909 SSU72P8A0A1W2PR75 194 aa3.87□□□□□ -1.79
CBX3P4-201ENST00000538909 ITGB3P05106 788 aa3.87□□□□□ -1.79
CBX3P4-201ENST00000538909 USP17L7P0C7H9 530 aa3.87□□□□□ -1.79
CBX3P4-201ENST00000538909 ZNF20P17024 532 aa3.87□□□□□ -1.79
CBX3P4-201ENST00000538909 ARL4AP40617 200 aa3.87□□□□□ -1.79
CBX3P4-201ENST00000538909 B4GALNT3Q6L9W6 998 aa3.87□□□□□ -1.79
CBX3P4-201ENST00000538909 LIPIQ6XZB0 460 aa3.87□□□□□ -1.79
CBX3P4-201ENST00000538909 NLGN1Q8N2Q7 840 aa3.87□□□□□ -1.79
CBX3P4-201ENST00000538909 USHBP1Q8N6Y0 703 aa3.87□□□□□ -1.79
CBX3P4-201ENST00000538909 LOXL4Q96JB6 756 aa3.87□□□□□ -1.79
CBX3P4-201ENST00000538909 KREMEN1Q96MU8 473 aa3.87□□□□□ -1.79
CBX3P4-201ENST00000538909 ASCC2Q9H1I8 757 aaPredicted RBP3.87□□□□□ -1.79
CBX3P4-201ENST00000538909 CORINQ9Y5Q5 1042 aa3.87□□□□□ -1.79
CBX3P4-201ENST00000538909 TAF6LQ9Y6J9 622 aa3.87□□□□□ -1.79
CBX3P4-201ENST00000538909 TMEM82A0PJX8 343 aa3.86□□□□□ -1.79
CBX3P4-201ENST00000538909 PPP1R15AO75807 674 aaPredicted RBP3.86□□□□□ -1.79
CBX3P4-201ENST00000538909 PLA2G1BP04054 148 aaKnown RBP3.86□□□□□ -1.79
CBX3P4-201ENST00000538909 PFKLP17858 780 aa3.86□□□□□ -1.79
CBX3P4-201ENST00000538909 PLCG1P19174 1290 aa3.86□□□□□ -1.79
CBX3P4-201ENST00000538909 TACR2P21452 398 aa3.86□□□□□ -1.79
CBX3P4-201ENST00000538909 ZNF200P98182 395 aaPredicted RBP3.86□□□□□ -1.79
CBX3P4-201ENST00000538909 TMEM62Q0P6H9 643 aa3.86□□□□□ -1.79
CBX3P4-201ENST00000538909 NMIQ13287 307 aaPredicted RBP3.86□□□□□ -1.79
CBX3P4-201ENST00000538909 MAP3K11Q16584 847 aa3.86□□□□□ -1.79
CBX3P4-201ENST00000538909 HSF5Q4G112 596 aaPredicted RBP3.86□□□□□ -1.79
CBX3P4-201ENST00000538909 VWA3BQ502W6 1294 aa3.86□□□□□ -1.79
CBX3P4-201ENST00000538909 RPTNQ6XPR3 784 aa3.86□□□□□ -1.79
CBX3P4-201ENST00000538909 SV2BQ7L1I2 683 aa3.86□□□□□ -1.79
CBX3P4-201ENST00000538909 ANKRD24Q8TF21 1146 aa3.86□□□□□ -1.79
CBX3P4-201ENST00000538909 KRTAP3-1Q9BYR8 98 aa3.86□□□□□ -1.79
CBX3P4-201ENST00000538909 PRDM14Q9GZV8 571 aa3.86□□□□□ -1.79
CBX3P4-201ENST00000538909 SLITRK6Q9H5Y7 841 aa3.86□□□□□ -1.79
CBX3P4-201ENST00000538909 ADAM30Q9UKF2 790 aa3.86□□□□□ -1.79
CBX3P4-201ENST00000538909 TCFL5Q9UL49 500 aa3.86□□□□□ -1.79
CBX3P4-201ENST00000538909 GPR55Q9Y2T6 319 aaPredicted RBP3.86□□□□□ -1.79
CBX3P4-201ENST00000538909 SYPP08247 313 aa3.85□□□□□ -1.79
CBX3P4-201ENST00000538909 PRKCAP17252 672 aa3.85□□□□□ -1.79
CBX3P4-201ENST00000538909 IGFBP6P24592 240 aaPredicted RBP3.85□□□□□ -1.79
CBX3P4-201ENST00000538909 MAPK8P45983 427 aa3.85□□□□□ -1.79
CBX3P4-201ENST00000538909 YARSP54577 528 aaKnown RBP3.85□□□□□ -1.79
CBX3P4-201ENST00000538909 PCBP3P57721 371 aaKnown RBP3.85□□□□□ -1.79
CBX3P4-201ENST00000538909 DSC3Q14574 896 aa3.85□□□□□ -1.79
CBX3P4-201ENST00000538909 PLEKHN1Q494U1 663 aaPredicted RBP3.85□□□□□ -1.79
CBX3P4-201ENST00000538909 GALNT18Q6P9A2 607 aa3.85□□□□□ -1.79
CBX3P4-201ENST00000538909 Q8N1X5 172 aa3.85□□□□□ -1.79
CBX3P4-201ENST00000538909 RETREG2Q8NC44 543 aa3.85□□□□□ -1.79
CBX3P4-201ENST00000538909 FNIP1Q8TF40 1166 aa3.85□□□□□ -1.79
CBX3P4-201ENST00000538909 ZNF526Q8TF50 670 aaPredicted RBP3.85□□□□□ -1.79
CBX3P4-201ENST00000538909 ASPNQ9BXN1 380 aa3.85□□□□□ -1.79
CBX3P4-201ENST00000538909 HDAC8Q9BY41 377 aa3.85□□□□□ -1.79
CBX3P4-201ENST00000538909 PMF1-BGLAPU3KQ54 211 aa3.85□□□□□ -1.79
CBX3P4-201ENST00000538909 C1QTNF3-AMACRE9PGA6 284 aa3.84□□□□□ -1.79
CBX3P4-201ENST00000538909 MSL3P1P0C860 447 aa3.84□□□□□ -1.79
CBX3P4-201ENST00000538909 GJA9P57773 515 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms