RNA–Protein interactions for RNA: ENST00000537400.1

PRKAB1-203, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 3

Gene PRKAB1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-203ENST00000537400 SENP2Q9HC62 589 aa16.46■□□□□ 0.23
PRKAB1-203ENST00000537400 PTPRFP10586 1907 aa16.46■□□□□ 0.23
PRKAB1-203ENST00000537400 LOC285556D6RIA3 1793 aa16.46■□□□□ 0.22
PRKAB1-203ENST00000537400 WDR33Q9C0J8 1336 aaKnown RBP16.45■□□□□ 0.22
PRKAB1-203ENST00000537400 USP17L15C9J2P7 530 aa16.45■□□□□ 0.22
PRKAB1-203ENST00000537400 USP17L13C9JLJ4 530 aa16.45■□□□□ 0.22
PRKAB1-203ENST00000537400 USP17L11C9JVI0 530 aa16.45■□□□□ 0.22
PRKAB1-203ENST00000537400 USP17L18D6R9N7 530 aa16.45■□□□□ 0.22
PRKAB1-203ENST00000537400 USP17L22D6RA61 530 aa16.45■□□□□ 0.22
PRKAB1-203ENST00000537400 USP17L17D6RBQ6 530 aa16.45■□□□□ 0.22
PRKAB1-203ENST00000537400 USP17L19D6RCP7 530 aa16.45■□□□□ 0.22
PRKAB1-203ENST00000537400 USP17L20D6RJB6 530 aa16.45■□□□□ 0.22
PRKAB1-203ENST00000537400 ZBTB43O43298 467 aa16.45■□□□□ 0.22
PRKAB1-203ENST00000537400 TM4SF4P48230 202 aa16.45■□□□□ 0.22
PRKAB1-203ENST00000537400 APOBRQ0VD83 1088 aa16.45■□□□□ 0.22
PRKAB1-203ENST00000537400 USP17L24Q0WX57 530 aa16.45■□□□□ 0.22
PRKAB1-203ENST00000537400 MKRN3Q13064 507 aaKnown RBP16.45■□□□□ 0.22
PRKAB1-203ENST00000537400 KIAA1755Q5JYT7 1200 aa16.45■□□□□ 0.22
PRKAB1-203ENST00000537400 OTUD7BQ6GQQ9 843 aa16.45■□□□□ 0.22
PRKAB1-203ENST00000537400 GADL1Q6ZQY3 521 aa16.45■□□□□ 0.22
PRKAB1-203ENST00000537400 CTCFLQ8NI51 663 aaPredicted RBP16.45■□□□□ 0.22
PRKAB1-203ENST00000537400 BRI3BPQ8WY22 251 aa16.45■□□□□ 0.22
PRKAB1-203ENST00000537400 CHMP4CQ96CF2 233 aa16.45■□□□□ 0.22
PRKAB1-203ENST00000537400 BRPF3Q9ULD4 1205 aa16.45■□□□□ 0.22
PRKAB1-203ENST00000537400 NID2Q14112 1375 aa16.45■□□□□ 0.22
PRKAB1-203ENST00000537400 CCDC196A0A1B0GTZ2 297 aa16.44■□□□□ 0.22
PRKAB1-203ENST00000537400 RAD21O60216 631 aa16.44■□□□□ 0.22
PRKAB1-203ENST00000537400 PARP1P09874 1014 aaKnown RBP16.44■□□□□ 0.22
PRKAB1-203ENST00000537400 GNAQP50148 359 aa16.44■□□□□ 0.22
PRKAB1-203ENST00000537400 ZNF543Q08ER8 600 aa16.44■□□□□ 0.22
PRKAB1-203ENST00000537400 GRM4Q14833 912 aa16.44■□□□□ 0.22
PRKAB1-203ENST00000537400 SPICE1Q8N0Z3 855 aa16.44■□□□□ 0.22
PRKAB1-203ENST00000537400 FANCBQ8NB91 859 aa16.44■□□□□ 0.22
PRKAB1-203ENST00000537400 ZSCAN31Q96LW9 406 aaPredicted RBP16.44■□□□□ 0.22
PRKAB1-203ENST00000537400 RBM28Q9NW13 759 aaKnown RBP16.44■□□□□ 0.22
PRKAB1-203ENST00000537400 FEM1BQ9UK73 627 aa16.44■□□□□ 0.22
PRKAB1-203ENST00000537400 PNMA3Q9UL41 463 aa16.44■□□□□ 0.22
PRKAB1-203ENST00000537400 LIMCH1Q9UPQ0 1083 aa16.44■□□□□ 0.22
PRKAB1-203ENST00000537400 MYPNQ86TC9 1320 aa16.44■□□□□ 0.22
PRKAB1-203ENST00000537400 PALM3A6NDB9 673 aaPredicted RBP16.43■□□□□ 0.22
PRKAB1-203ENST00000537400 GOLGA8BA8MQT2 603 aa16.43■□□□□ 0.22
PRKAB1-203ENST00000537400 BTBD19C9JJ37 291 aa16.43■□□□□ 0.22
PRKAB1-203ENST00000537400 SMARCA1P28370 1054 aa16.43■□□□□ 0.22
PRKAB1-203ENST00000537400 PDIA3P30101 505 aaKnown RBP16.43■□□□□ 0.22
PRKAB1-203ENST00000537400 VEGFBP49765 207 aa16.43■□□□□ 0.22
PRKAB1-203ENST00000537400 KIF23Q02241 960 aaPredicted RBP16.43■□□□□ 0.22
PRKAB1-203ENST00000537400 CCDC96Q2M329 555 aa16.43■□□□□ 0.22
PRKAB1-203ENST00000537400 FAM83BQ5T0W9 1011 aa16.43■□□□□ 0.22
PRKAB1-203ENST00000537400 GPAT2Q6NUI2 795 aa16.43■□□□□ 0.22
PRKAB1-203ENST00000537400 BTNL9Q6UXG8 535 aa16.43■□□□□ 0.22
PRKAB1-203ENST00000537400 CATSPERGQ6ZRH7 1159 aa16.43■□□□□ 0.22
PRKAB1-203ENST00000537400 FAM160B2Q86V87 743 aa16.43■□□□□ 0.22
PRKAB1-203ENST00000537400 MICU3Q86XE3 530 aa16.43■□□□□ 0.22
PRKAB1-203ENST00000537400 CHURC1Q8WUH1 139 aa16.43■□□□□ 0.22
PRKAB1-203ENST00000537400 NUP133Q8WUM0 1156 aa16.43■□□□□ 0.22
PRKAB1-203ENST00000537400 LZTS2Q9BRK4 669 aa16.43■□□□□ 0.22
PRKAB1-203ENST00000537400 RPAP3Q9H6T3 665 aaPredicted RBP16.43■□□□□ 0.22
PRKAB1-203ENST00000537400 ALDH1A1P00352 501 aa16.42■□□□□ 0.22
PRKAB1-203ENST00000537400 FDX1P10109 184 aa16.42■□□□□ 0.22
PRKAB1-203ENST00000537400 OSBPP22059 807 aa16.42■□□□□ 0.22
PRKAB1-203ENST00000537400 METAP2P50579 478 aaKnown RBP eCLIP16.42■□□□□ 0.22
PRKAB1-203ENST00000537400 STAT2P52630 851 aa16.42■□□□□ 0.22
PRKAB1-203ENST00000537400 TREML2Q5T2D2 321 aa16.42■□□□□ 0.22
PRKAB1-203ENST00000537400 IFNL1Q8IU54 200 aa16.42■□□□□ 0.22
PRKAB1-203ENST00000537400 GTF3C2Q8WUA4 911 aaPredicted RBP16.42■□□□□ 0.22
PRKAB1-203ENST00000537400 SH2B1Q9NRF2 756 aaPredicted RBP16.42■□□□□ 0.22
PRKAB1-203ENST00000537400 HOXC10Q9NYD6 342 aa16.42■□□□□ 0.22
PRKAB1-203ENST00000537400 MAD2L2Q9UI95 211 aa16.42■□□□□ 0.22
PRKAB1-203ENST00000537400 TPCN1Q9ULQ1 816 aa16.42■□□□□ 0.22
PRKAB1-203ENST00000537400 THSD7BQ9C0I4 1608 aa16.41■□□□□ 0.22
PRKAB1-203ENST00000537400 GOLGA8AA7E2F4 631 aa16.41■□□□□ 0.22
PRKAB1-203ENST00000537400 DHX16O60231 1041 aaKnown RBP16.41■□□□□ 0.22
PRKAB1-203ENST00000537400 GRM1Q13255 1194 aa16.41■□□□□ 0.22
PRKAB1-203ENST00000537400 DGKZQ13574 1117 aa16.41■□□□□ 0.22
PRKAB1-203ENST00000537400 COG2Q14746 738 aa16.41■□□□□ 0.22
PRKAB1-203ENST00000537400 RTN1Q16799 776 aa16.41■□□□□ 0.22
PRKAB1-203ENST00000537400 PRPF38AQ8NAV1 312 aaKnown RBP16.41■□□□□ 0.22
PRKAB1-203ENST00000537400 SNX21Q969T3 373 aa16.41■□□□□ 0.22
PRKAB1-203ENST00000537400 PTPN18Q99952 460 aa16.41■□□□□ 0.22
PRKAB1-203ENST00000537400 MYL10Q9BUA6 226 aa16.41■□□□□ 0.22
PRKAB1-203ENST00000537400 TANGO6Q9C0B7 1094 aa16.41■□□□□ 0.22
PRKAB1-203ENST00000537400 NAP1L2Q9ULW6 460 aaPredicted RBP16.41■□□□□ 0.22
PRKAB1-203ENST00000537400 HPS5Q9UPZ3 1129 aa16.41■□□□□ 0.22
PRKAB1-203ENST00000537400 MTMR7Q9Y216 660 aa16.41■□□□□ 0.22
PRKAB1-203ENST00000537400 TMEM232C9JQI7 657 aa16.4■□□□□ 0.22
PRKAB1-203ENST00000537400 KLRF2D3W0D1 207 aa16.4■□□□□ 0.22
PRKAB1-203ENST00000537400 PDHXO00330 501 aa16.4■□□□□ 0.22
PRKAB1-203ENST00000537400 PFKFB2O60825 505 aa16.4■□□□□ 0.22
PRKAB1-203ENST00000537400 AOC2O75106 756 aa16.4■□□□□ 0.22
PRKAB1-203ENST00000537400 CAPN15O75808 1086 aa16.4■□□□□ 0.22
PRKAB1-203ENST00000537400 FLOT1O75955 427 aa16.4■□□□□ 0.22
PRKAB1-203ENST00000537400 IRX3P78415 501 aaPredicted RBP16.4■□□□□ 0.22
PRKAB1-203ENST00000537400 LBX2Q6XYB7 198 aa16.4■□□□□ 0.22
PRKAB1-203ENST00000537400 KCTD1Q719H9 257 aa16.4■□□□□ 0.22
PRKAB1-203ENST00000537400 PARK7Q99497 189 aaKnown RBP16.4■□□□□ 0.22
PRKAB1-203ENST00000537400 NUP88Q99567 741 aaPredicted RBP16.4■□□□□ 0.22
PRKAB1-203ENST00000537400 SLF1Q9BQI6 1058 aa16.4■□□□□ 0.22
PRKAB1-203ENST00000537400 ASCC2Q9H1I8 757 aaPredicted RBP16.4■□□□□ 0.22
PRKAB1-203ENST00000537400 SLKQ9H2G2 1235 aaPredicted RBP16.4■□□□□ 0.22
PRKAB1-203ENST00000537400 PPP1R9AQ9ULJ8 1098 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms