RNA–Protein interactions for RNA: ENST00000537068.5

SNHG1-204, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 629 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-204ENST00000537068 VCAM1P19320 739 aa6.39□□□□□ -1.39
SNHG1-204ENST00000537068 SHMT1P34896 483 aa6.39□□□□□ -1.39
SNHG1-204ENST00000537068 PLCD1P51178 756 aa6.39□□□□□ -1.39
SNHG1-204ENST00000537068 USP14P54578 494 aa6.39□□□□□ -1.39
SNHG1-204ENST00000537068 CCNA1P78396 465 aa6.39□□□□□ -1.39
SNHG1-204ENST00000537068 PDE3AQ14432 1141 aa6.39□□□□□ -1.39
SNHG1-204ENST00000537068 GRB14Q14449 540 aa6.39□□□□□ -1.39
SNHG1-204ENST00000537068 LRRC26Q2I0M4 334 aa6.39□□□□□ -1.39
SNHG1-204ENST00000537068 CERKLQ49MI3 558 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-204ENST00000537068 FAM109BQ6ICB4 259 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-204ENST00000537068 TYW1BQ6NUM6 668 aa6.39□□□□□ -1.39
SNHG1-204ENST00000537068 POTEBQ6S5H4 581 aa6.39□□□□□ -1.39
SNHG1-204ENST00000537068 TTC6Q86TZ1 520 aa6.39□□□□□ -1.39
SNHG1-204ENST00000537068 MAGEB6Q8N7X4 407 aa6.39□□□□□ -1.39
SNHG1-204ENST00000537068 NPLOC4Q8TAT6 608 aa6.39□□□□□ -1.39
SNHG1-204ENST00000537068 LPAR1Q92633 364 aa6.39□□□□□ -1.39
SNHG1-204ENST00000537068 REPIN1Q9BWE0 567 aaKnown RBP6.39□□□□□ -1.39
SNHG1-204ENST00000537068 CCDC8Q9H0W5 538 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-204ENST00000537068 ANTXR1Q9H6X2 564 aa6.39□□□□□ -1.39
SNHG1-204ENST00000537068 SAP30BPQ9UHR5 308 aaKnown RBP6.39□□□□□ -1.39
SNHG1-204ENST00000537068 STXBP5LQ9Y2K9 1186 aa6.39□□□□□ -1.39
SNHG1-204ENST00000537068 A0A1W2PRG0 241 aa6.38□□□□□ -1.39
SNHG1-204ENST00000537068 MSCO60682 206 aa6.38□□□□□ -1.39
SNHG1-204ENST00000537068 IDH1O75874 414 aaKnown RBP6.38□□□□□ -1.39
SNHG1-204ENST00000537068 CYBAP13498 195 aa6.38□□□□□ -1.39
SNHG1-204ENST00000537068 USP5P45974 858 aa6.38□□□□□ -1.39
SNHG1-204ENST00000537068 EMP3P54852 163 aa6.38□□□□□ -1.39
SNHG1-204ENST00000537068 MAP3K12Q12852 859 aa6.38□□□□□ -1.39
SNHG1-204ENST00000537068 ABCB5Q2M3G0 1257 aa6.38□□□□□ -1.39
SNHG1-204ENST00000537068 ARSIQ5FYB1 569 aa6.38□□□□□ -1.39
SNHG1-204ENST00000537068 CEP85Q6P2H3 762 aa6.38□□□□□ -1.39
SNHG1-204ENST00000537068 SIAH1Q8IUQ4 282 aa6.38□□□□□ -1.39
SNHG1-204ENST00000537068 DEFB123Q8N688 67 aa6.38□□□□□ -1.39
SNHG1-204ENST00000537068 ZNF454Q8N9F8 522 aa6.38□□□□□ -1.39
SNHG1-204ENST00000537068 MIGA1Q8NAN2 632 aa6.38□□□□□ -1.39
SNHG1-204ENST00000537068 TRPV1Q8NER1 839 aa6.38□□□□□ -1.39
SNHG1-204ENST00000537068 ACER1Q8TDN7 264 aa6.38□□□□□ -1.39
SNHG1-204ENST00000537068 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.38□□□□□ -1.39
SNHG1-204ENST00000537068 NLRP7Q8WX94 980 aa6.38□□□□□ -1.39
SNHG1-204ENST00000537068 PHOX2BQ99453 314 aa6.38□□□□□ -1.39
SNHG1-204ENST00000537068 PAGR1Q9BTK6 254 aa6.38□□□□□ -1.39
SNHG1-204ENST00000537068 TRIM34Q9BYJ4 488 aa6.38□□□□□ -1.39
SNHG1-204ENST00000537068 UBE2OQ9C0C9 1292 aaKnown RBP6.38□□□□□ -1.39
SNHG1-204ENST00000537068 CABP5Q9NP86 173 aa6.38□□□□□ -1.39
SNHG1-204ENST00000537068 DDX20Q9UHI6 824 aaKnown RBP6.38□□□□□ -1.39
SNHG1-204ENST00000537068 ADAMTS5Q9UNA0 930 aa6.38□□□□□ -1.39
SNHG1-204ENST00000537068 NDUFB9Q9Y6M9 179 aa6.38□□□□□ -1.39
SNHG1-204ENST00000537068 DNAH12Q6ZR08 3092 aa6.38□□□□□ -1.39
SNHG1-204ENST00000537068 TCRBV5S4A2TA0A5A2 114 aa6.37□□□□□ -1.39
SNHG1-204ENST00000537068 DNM1LO00429 736 aa6.37□□□□□ -1.39
SNHG1-204ENST00000537068 GLRX3O76003 335 aaKnown RBP6.37□□□□□ -1.39
SNHG1-204ENST00000537068 MS4A1P11836 297 aa6.37□□□□□ -1.39
SNHG1-204ENST00000537068 HOXB1P14653 301 aaPredicted RBP6.37□□□□□ -1.39
SNHG1-204ENST00000537068 FOSBP53539 338 aa6.37□□□□□ -1.39
SNHG1-204ENST00000537068 OS9Q13438 667 aaPredicted RBP6.37□□□□□ -1.39
SNHG1-204ENST00000537068 COG2Q14746 738 aa6.37□□□□□ -1.39
SNHG1-204ENST00000537068 SNX17Q15036 470 aa6.37□□□□□ -1.39
SNHG1-204ENST00000537068 RAB3GAP1Q15042 981 aa6.37□□□□□ -1.39
SNHG1-204ENST00000537068 TTF1Q15361 905 aaPredicted RBP6.37□□□□□ -1.39
SNHG1-204ENST00000537068 KIAA1755Q5JYT7 1200 aa6.37□□□□□ -1.39
SNHG1-204ENST00000537068 C1orf53Q5VUE5 145 aa6.37□□□□□ -1.39
SNHG1-204ENST00000537068 MFSD14CQ5VZR4 134 aa6.37□□□□□ -1.39
SNHG1-204ENST00000537068 OLFML2BQ68BL8 750 aa6.37□□□□□ -1.39
SNHG1-204ENST00000537068 Q7L0L9 218 aa6.37□□□□□ -1.39
SNHG1-204ENST00000537068 CCAR1Q8IX12 1150 aaKnown RBP6.37□□□□□ -1.39
SNHG1-204ENST00000537068 ABRAQ8N0Z2 381 aa6.37□□□□□ -1.39
SNHG1-204ENST00000537068 SHCBP1Q8NEM2 672 aa6.37□□□□□ -1.39
SNHG1-204ENST00000537068 DDRGK1Q96HY6 314 aa6.37□□□□□ -1.39
SNHG1-204ENST00000537068 MOV10L1Q9BXT6 1211 aaKnown RBP6.37□□□□□ -1.39
SNHG1-204ENST00000537068 KRTAP3-3Q9BYR6 98 aa6.37□□□□□ -1.39
SNHG1-204ENST00000537068 KRTAP3-2Q9BYR7 98 aa6.37□□□□□ -1.39
SNHG1-204ENST00000537068 RPAP3Q9H6T3 665 aaPredicted RBP6.37□□□□□ -1.39
SNHG1-204ENST00000537068 C1orf115Q9H7X2 142 aa6.37□□□□□ -1.39
SNHG1-204ENST00000537068 DCP1AQ9NPI6 582 aaPredicted RBP6.37□□□□□ -1.39
SNHG1-204ENST00000537068 HOXC10Q9NYD6 342 aa6.37□□□□□ -1.39
SNHG1-204ENST00000537068 DAXXQ9UER7 740 aaPredicted RBP6.37□□□□□ -1.39
SNHG1-204ENST00000537068 MAGEB6P1A0A0J9YX57 407 aa6.36□□□□□ -1.39
SNHG1-204ENST00000537068 COBLO75128 1261 aa6.36□□□□□ -1.39
SNHG1-204ENST00000537068 CYP2C19P33261 490 aa6.36□□□□□ -1.39
SNHG1-204ENST00000537068 MDM2Q00987 491 aaPredicted RBP6.36□□□□□ -1.39
SNHG1-204ENST00000537068 ATP2B2Q01814 1243 aa6.36□□□□□ -1.39
SNHG1-204ENST00000537068 SEPT2Q15019 361 aa6.36□□□□□ -1.39
SNHG1-204ENST00000537068 ZYXQ15942 572 aaKnown RBP6.36□□□□□ -1.39
SNHG1-204ENST00000537068 SLC9C2Q5TAH2 1124 aa6.36□□□□□ -1.39
SNHG1-204ENST00000537068 PADI6Q6TGC4 694 aa6.36□□□□□ -1.39
SNHG1-204ENST00000537068 SLC39A5Q6ZMH5 540 aa6.36□□□□□ -1.39
SNHG1-204ENST00000537068 ERC1Q8IUD2 1116 aa6.36□□□□□ -1.39
SNHG1-204ENST00000537068 MB21D1Q8N884 522 aa6.36□□□□□ -1.39
SNHG1-204ENST00000537068 RHPN1Q8TCX5 695 aa6.36□□□□□ -1.39
SNHG1-204ENST00000537068 HS3ST6Q96QI5 342 aa6.36□□□□□ -1.39
SNHG1-204ENST00000537068 SENP6Q9GZR1 1112 aaPredicted RBP6.36□□□□□ -1.39
SNHG1-204ENST00000537068 SPATC1LQ9H0A9 340 aa6.36□□□□□ -1.39
SNHG1-204ENST00000537068 EXOC6BQ9Y2D4 811 aa6.36□□□□□ -1.39
SNHG1-204ENST00000537068 TMX2Q9Y320 296 aa6.36□□□□□ -1.39
SNHG1-204ENST00000537068 IVNS1ABPQ9Y6Y0 642 aa6.36□□□□□ -1.39
SNHG1-204ENST00000537068 MYH4Q9Y623 1939 aa6.36□□□□□ -1.39
SNHG1-204ENST00000537068 ZNF532Q9HCE3 1301 aa6.35□□□□□ -1.39
SNHG1-204ENST00000537068 SEPT4O43236 478 aa6.35□□□□□ -1.39
SNHG1-204ENST00000537068 POLR3DP05423 398 aaPredicted RBP6.35□□□□□ -1.39
SNHG1-204ENST00000537068 PDE6AP16499 860 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms