RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 PSPNO60542 156 aa8.37□□□□□ -1.07
VBP1-203ENST00000535916 GREM1O60565 184 aa8.37□□□□□ -1.07
VBP1-203ENST00000535916 POLR2BP30876 1174 aaKnown RBP8.37□□□□□ -1.07
VBP1-203ENST00000535916 ITGAEP38570 1179 aa8.37□□□□□ -1.07
VBP1-203ENST00000535916 CRKP46108 304 aa8.37□□□□□ -1.07
VBP1-203ENST00000535916 LINC00310P59036 64 aa8.37□□□□□ -1.07
VBP1-203ENST00000535916 RNF4P78317 190 aa8.37□□□□□ -1.07
VBP1-203ENST00000535916 OVOS1Q6IE37 1185 aa8.37□□□□□ -1.07
VBP1-203ENST00000535916 TMC3Q7Z5M5 1100 aa8.37□□□□□ -1.07
VBP1-203ENST00000535916 USHBP1Q8N6Y0 703 aa8.37□□□□□ -1.07
VBP1-203ENST00000535916 SYTL5Q8TDW5 730 aaPredicted RBP8.37□□□□□ -1.07
VBP1-203ENST00000535916 SHISA4Q96DD7 197 aa8.37□□□□□ -1.07
VBP1-203ENST00000535916 GZF1Q9H116 711 aaPredicted RBP8.37□□□□□ -1.07
VBP1-203ENST00000535916 GMIPQ9P107 970 aa8.37□□□□□ -1.07
VBP1-203ENST00000535916 ROBO2Q9HCK4 1378 aa8.36□□□□□ -1.07
VBP1-203ENST00000535916 NOTOA8MTQ0 251 aa8.36□□□□□ -1.07
VBP1-203ENST00000535916 ATE1O95260 518 aa8.36□□□□□ -1.07
VBP1-203ENST00000535916 EFEMP2O95967 443 aa8.36□□□□□ -1.07
VBP1-203ENST00000535916 RPL10P27635 214 aaKnown RBP8.36□□□□□ -1.07
VBP1-203ENST00000535916 CIAPIN1Q6FI81 312 aa8.36□□□□□ -1.07
VBP1-203ENST00000535916 RNF111Q6ZNA4 994 aa8.36□□□□□ -1.07
VBP1-203ENST00000535916 ENOX1Q8TC92 643 aaKnown RBP8.36□□□□□ -1.07
VBP1-203ENST00000535916 FOXP3Q9BZS1 431 aa8.36□□□□□ -1.07
VBP1-203ENST00000535916 USP2O75604 605 aaPredicted RBP8.35□□□□□ -1.07
VBP1-203ENST00000535916 PDE6BP35913 854 aa8.35□□□□□ -1.07
VBP1-203ENST00000535916 SNW1Q13573 536 aaKnown RBP8.35□□□□□ -1.07
VBP1-203ENST00000535916 SNX17Q15036 470 aa8.35□□□□□ -1.07
VBP1-203ENST00000535916 NBPF12Q5TAG4 269 aaPredicted RBP8.35□□□□□ -1.07
VBP1-203ENST00000535916 AMIGO3Q86WK7 504 aa8.35□□□□□ -1.07
VBP1-203ENST00000535916 DAGLBQ8NCG7 672 aa8.35□□□□□ -1.07
VBP1-203ENST00000535916 ZNF296Q8WUU4 475 aaPredicted RBP8.35□□□□□ -1.07
VBP1-203ENST00000535916 TCTN2Q96GX1 697 aa8.35□□□□□ -1.07
VBP1-203ENST00000535916 KRTAP9-8Q9BYQ0 159 aa8.35□□□□□ -1.07
VBP1-203ENST00000535916 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.35□□□□□ -1.07
VBP1-203ENST00000535916 NUAK1O60285 661 aa8.34□□□□□ -1.07
VBP1-203ENST00000535916 DLG4P78352 724 aa8.34□□□□□ -1.07
VBP1-203ENST00000535916 NBPF9Q3BBW0 867 aa8.34□□□□□ -1.07
VBP1-203ENST00000535916 WAPLQ7Z5K2 1190 aa8.34□□□□□ -1.07
VBP1-203ENST00000535916 SIRT2Q8IXJ6 389 aa8.34□□□□□ -1.07
VBP1-203ENST00000535916 ADAMTS1Q9UHI8 967 aa8.34□□□□□ -1.07
VBP1-203ENST00000535916 GGT7Q9UJ14 662 aa8.34□□□□□ -1.07
VBP1-203ENST00000535916 ZMYM5Q9UJ78 669 aa8.34□□□□□ -1.07
VBP1-203ENST00000535916 PEX10O60683 326 aa8.33□□□□□ -1.08
VBP1-203ENST00000535916 SEZ6Q53EL9 994 aa8.33□□□□□ -1.08
VBP1-203ENST00000535916 CDCP2Q5VXM1 449 aa8.33□□□□□ -1.08
VBP1-203ENST00000535916 NLRX1Q86UT6 975 aa8.33□□□□□ -1.08
VBP1-203ENST00000535916 ZNF655Q8N720 491 aaPredicted RBP8.33□□□□□ -1.08
VBP1-203ENST00000535916 ZNF512BQ96KM6 892 aaPredicted RBP8.33□□□□□ -1.08
VBP1-203ENST00000535916 ZNF552Q9H707 407 aaPredicted RBP8.33□□□□□ -1.08
VBP1-203ENST00000535916 CNNM2Q9H8M5 875 aa8.33□□□□□ -1.08
VBP1-203ENST00000535916 EHMT1Q9H9B1 1298 aa8.33□□□□□ -1.08
VBP1-203ENST00000535916 UBP1Q9NZI7 540 aa8.33□□□□□ -1.08
VBP1-203ENST00000535916 TCFL5Q9UL49 500 aa8.33□□□□□ -1.08
VBP1-203ENST00000535916 TMEM82A0PJX8 343 aa8.32□□□□□ -1.08
VBP1-203ENST00000535916 FKTNO75072 461 aa8.32□□□□□ -1.08
VBP1-203ENST00000535916 SEMA7AO75326 666 aa8.32□□□□□ -1.08
VBP1-203ENST00000535916 CLCQ05315 142 aa8.32□□□□□ -1.08
VBP1-203ENST00000535916 ZPBP2Q6X784 338 aa8.32□□□□□ -1.08
VBP1-203ENST00000535916 GIPC2Q8TF65 315 aa8.32□□□□□ -1.08
VBP1-203ENST00000535916 ATG4CQ96DT6 458 aa8.32□□□□□ -1.08
VBP1-203ENST00000535916 MAP6Q96JE9 813 aa8.32□□□□□ -1.08
VBP1-203ENST00000535916 SGPP1Q9BX95 441 aa8.32□□□□□ -1.08
VBP1-203ENST00000535916 BCL2L13Q9BXK5 485 aa8.32□□□□□ -1.08
VBP1-203ENST00000535916 IRF2BPLQ9H1B7 796 aa8.32□□□□□ -1.08
VBP1-203ENST00000535916 MINPP1Q9UNW1 487 aa8.32□□□□□ -1.08
VBP1-203ENST00000535916 PRAMEF1O95521 474 aa8.31□□□□□ -1.08
VBP1-203ENST00000535916 PCBP3P57721 371 aaKnown RBP8.31□□□□□ -1.08
VBP1-203ENST00000535916 MRPL58Q14197 206 aaKnown RBP8.31□□□□□ -1.08
VBP1-203ENST00000535916 BBS9Q3SYG4 887 aa8.31□□□□□ -1.08
VBP1-203ENST00000535916 GK5Q6ZS86 529 aa8.31□□□□□ -1.08
VBP1-203ENST00000535916 TTLL10Q6ZVT0 673 aa8.31□□□□□ -1.08
VBP1-203ENST00000535916 HS2ST1Q7LGA3 356 aa8.31□□□□□ -1.08
VBP1-203ENST00000535916 NLRC3Q7RTR2 1065 aa8.31□□□□□ -1.08
VBP1-203ENST00000535916 ANTXR1Q9H6X2 564 aa8.31□□□□□ -1.08
VBP1-203ENST00000535916 GCM1Q9NP62 436 aa8.31□□□□□ -1.08
VBP1-203ENST00000535916 TEX51A0A1B0GUA7 166 aa8.3□□□□□ -1.08
VBP1-203ENST00000535916 SSU72P8A0A1W2PR75 194 aa8.3□□□□□ -1.08
VBP1-203ENST00000535916 CLEC3AO75596 197 aa8.3□□□□□ -1.08
VBP1-203ENST00000535916 SYPP08247 313 aa8.3□□□□□ -1.08
VBP1-203ENST00000535916 ADGRF1Q5T601 910 aa8.3□□□□□ -1.08
VBP1-203ENST00000535916 TMEM132EQ6IEE7 984 aa8.3□□□□□ -1.08
VBP1-203ENST00000535916 LILRA6Q6PI73 481 aa8.3□□□□□ -1.08
VBP1-203ENST00000535916 CEP128Q6ZU80 1094 aa8.3□□□□□ -1.08
VBP1-203ENST00000535916 LINC00116Q8NCU8 138 aa8.3□□□□□ -1.08
VBP1-203ENST00000535916 HHIPL1Q96JK4 782 aa8.3□□□□□ -1.08
VBP1-203ENST00000535916 PRDM14Q9GZV8 571 aa8.3□□□□□ -1.08
VBP1-203ENST00000535916 OR14I1A6ND48 311 aa8.29□□□□□ -1.08
VBP1-203ENST00000535916 SIGLEC6O43699 453 aa8.29□□□□□ -1.08
VBP1-203ENST00000535916 NRDCO43847 1150 aa8.29□□□□□ -1.08
VBP1-203ENST00000535916 KIR2DL1P43626 348 aaPredicted RBP8.29□□□□□ -1.08
VBP1-203ENST00000535916 KIR2DL2P43627 348 aaPredicted RBP8.29□□□□□ -1.08
VBP1-203ENST00000535916 RAD51AP2Q09MP3 1159 aa8.29□□□□□ -1.08
VBP1-203ENST00000535916 APOBRQ0VD83 1088 aa8.29□□□□□ -1.08
VBP1-203ENST00000535916 SLC14A2Q15849 920 aa8.29□□□□□ -1.08
VBP1-203ENST00000535916 INHBBP09529 407 aa8.28□□□□□ -1.08
VBP1-203ENST00000535916 MCM4P33991 863 aa8.28□□□□□ -1.08
VBP1-203ENST00000535916 TMEM192Q8IY95 271 aa8.28□□□□□ -1.08
VBP1-203ENST00000535916 REXO1Q8N1G1 1221 aaKnown RBP8.28□□□□□ -1.08
VBP1-203ENST00000535916 NME1P15531 152 aaKnown RBP8.27□□□□□ -1.09
VBP1-203ENST00000535916 ZNF326Q5BKZ1 582 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms