RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 SERPINB4P48594 390 aa1.93□□□□□ -2.1
COPB1-212ENST00000534771 SLURP1P55000 103 aa1.93□□□□□ -2.1
COPB1-212ENST00000534771 SRSF3P84103 164 aaKnown RBP1.93□□□□□ -2.1
COPB1-212ENST00000534771 PLCB3Q01970 1234 aa1.93□□□□□ -2.1
COPB1-212ENST00000534771 CHRNEQ04844 493 aa1.93□□□□□ -2.1
COPB1-212ENST00000534771 EGR3Q06889 387 aa1.93□□□□□ -2.1
COPB1-212ENST00000534771 LARP7Q4G0J3 582 aaKnown RBP eCLIP1.93□□□□□ -2.1
COPB1-212ENST00000534771 PRAMEF13Q5VWM6 474 aa1.93□□□□□ -2.1
COPB1-212ENST00000534771 TTC9BQ8N6N2 239 aa1.93□□□□□ -2.1
COPB1-212ENST00000534771 PLPPR2Q96GM1 343 aa1.93□□□□□ -2.1
COPB1-212ENST00000534771 GPR62Q9BZJ7 368 aa1.93□□□□□ -2.1
COPB1-212ENST00000534771 SIRT5Q9NXA8 310 aa1.93□□□□□ -2.1
COPB1-212ENST00000534771 DUSP13Q9UII6 198 aa1.93□□□□□ -2.1
COPB1-212ENST00000534771 GPR160Q9UJ42 338 aa1.93□□□□□ -2.1
COPB1-212ENST00000534771 KCNH3Q9ULD8 1083 aa1.93□□□□□ -2.1
COPB1-212ENST00000534771 DUSP10Q9Y6W6 482 aa1.93□□□□□ -2.1
COPB1-212ENST00000534771 OR14I1A6ND48 311 aa1.92□□□□□ -2.1
COPB1-212ENST00000534771 RBAK-RBAKDNI3L0D1 243 aa1.92□□□□□ -2.1
COPB1-212ENST00000534771 N4BP3O15049 544 aa1.92□□□□□ -2.1
COPB1-212ENST00000534771 FBLN1P23142 703 aa1.92□□□□□ -2.1
COPB1-212ENST00000534771 GRK4P32298 578 aa1.92□□□□□ -2.1
COPB1-212ENST00000534771 CNR2P34972 360 aa1.92□□□□□ -2.1
COPB1-212ENST00000534771 ETV3P41162 512 aa1.92□□□□□ -2.1
COPB1-212ENST00000534771 EPHB3P54753 998 aa1.92□□□□□ -2.1
COPB1-212ENST00000534771 PTPN11Q06124 597 aaPredicted RBP1.92□□□□□ -2.1
COPB1-212ENST00000534771 GAB4Q2WGN9 574 aa1.92□□□□□ -2.1
COPB1-212ENST00000534771 KRTAP15-1Q3LI76 137 aa1.92□□□□□ -2.1
COPB1-212ENST00000534771 NT5DC1Q5TFE4 455 aa1.92□□□□□ -2.1
COPB1-212ENST00000534771 RASIP1Q5U651 963 aa1.92□□□□□ -2.1
COPB1-212ENST00000534771 SLC6A19Q695T7 634 aa1.92□□□□□ -2.1
COPB1-212ENST00000534771 B4GALNT3Q6L9W6 998 aa1.92□□□□□ -2.1
COPB1-212ENST00000534771 TSPYL5Q86VY4 417 aaPredicted RBP1.92□□□□□ -2.1
COPB1-212ENST00000534771 SIRT2Q8IXJ6 389 aa1.92□□□□□ -2.1
COPB1-212ENST00000534771 ANKS4BQ8N8V4 417 aa1.92□□□□□ -2.1
COPB1-212ENST00000534771 C3orf58Q8NDZ4 430 aa1.92□□□□□ -2.1
COPB1-212ENST00000534771 PPP1R13LQ8WUF5 828 aa1.92□□□□□ -2.1
COPB1-212ENST00000534771 Q96M66 194 aa1.92□□□□□ -2.1
COPB1-212ENST00000534771 RBCK1Q9BYM8 510 aa1.92□□□□□ -2.1
COPB1-212ENST00000534771 SRCIN1Q9C0H9 1055 aa1.92□□□□□ -2.1
COPB1-212ENST00000534771 ST6GALNAC2Q9UJ37 374 aa1.92□□□□□ -2.1
COPB1-212ENST00000534771 CEP131Q9UPN4 1083 aa1.92□□□□□ -2.1
COPB1-212ENST00000534771 TSC22D4Q9Y3Q8 395 aa1.92□□□□□ -2.1
COPB1-212ENST00000534771 HRKO00198 91 aa1.91□□□□□ -2.1
COPB1-212ENST00000534771 GFRA2O00451 464 aa1.91□□□□□ -2.1
COPB1-212ENST00000534771 FBXO24O75426 580 aa1.91□□□□□ -2.1
COPB1-212ENST00000534771 CTGFP29279 349 aa1.91□□□□□ -2.1
COPB1-212ENST00000534771 LTKP29376 864 aa1.91□□□□□ -2.1
COPB1-212ENST00000534771 GALK1P51570 392 aa1.91□□□□□ -2.1
COPB1-212ENST00000534771 DUSP4Q13115 394 aa1.91□□□□□ -2.1
COPB1-212ENST00000534771 CDSNQ15517 529 aa1.91□□□□□ -2.1
COPB1-212ENST00000534771 CCDC142Q17RM4 750 aa1.91□□□□□ -2.1
COPB1-212ENST00000534771 ADGRF1Q5T601 910 aa1.91□□□□□ -2.1
COPB1-212ENST00000534771 PCNX4Q63HM2 1172 aa1.91□□□□□ -2.1
COPB1-212ENST00000534771 MCATQ8IVS2 390 aaKnown RBP1.91□□□□□ -2.1
COPB1-212ENST00000534771 MRPL41Q8IXM3 137 aaKnown RBP1.91□□□□□ -2.1
COPB1-212ENST00000534771 TMEFF1Q8IYR6 380 aa1.91□□□□□ -2.1
COPB1-212ENST00000534771 ANKRD24Q8TF21 1146 aa1.91□□□□□ -2.1
COPB1-212ENST00000534771 PWWP2AQ96N64 755 aa1.91□□□□□ -2.1
COPB1-212ENST00000534771 ZNF341Q9BYN7 854 aa1.91□□□□□ -2.1
COPB1-212ENST00000534771 MBD1Q9UIS9 605 aaPredicted RBP1.91□□□□□ -2.1
COPB1-212ENST00000534771 PPM1HQ9ULR3 514 aa1.91□□□□□ -2.1
COPB1-212ENST00000534771 TACC3Q9Y6A5 838 aa1.91□□□□□ -2.1
COPB1-212ENST00000534771 PNMA6FA0A0J9YX94 578 aa1.9□□□□□ -2.11
COPB1-212ENST00000534771 ARID3CA6NKF2 412 aa1.9□□□□□ -2.11
COPB1-212ENST00000534771 GIPC1O14908 333 aa1.9□□□□□ -2.11
COPB1-212ENST00000534771 PGRP06401 933 aa1.9□□□□□ -2.11
COPB1-212ENST00000534771 LMNB1P20700 586 aa1.9□□□□□ -2.11
COPB1-212ENST00000534771 CDK8P49336 464 aa1.9□□□□□ -2.11
COPB1-212ENST00000534771 PDE4BQ07343 736 aa1.9□□□□□ -2.11
COPB1-212ENST00000534771 SLC14A2Q15849 920 aa1.9□□□□□ -2.11
COPB1-212ENST00000534771 WIPI1Q5MNZ9 446 aaPredicted RBP1.9□□□□□ -2.11
COPB1-212ENST00000534771 PDZRN4Q6ZMN7 1036 aaPredicted RBP1.9□□□□□ -2.11
COPB1-212ENST00000534771 TMC7Q7Z402 723 aa1.9□□□□□ -2.11
COPB1-212ENST00000534771 DTWD2Q8NBA8 298 aa1.9□□□□□ -2.11
COPB1-212ENST00000534771 LINC01599Q8WXQ3 324 aa1.9□□□□□ -2.11
COPB1-212ENST00000534771 DPH2Q9BQC3 489 aaPredicted RBP1.9□□□□□ -2.11
COPB1-212ENST00000534771 KRTAP1-5Q9BYS1 174 aa1.9□□□□□ -2.11
COPB1-212ENST00000534771 OSBPL7Q9BZF2 842 aa1.9□□□□□ -2.11
COPB1-212ENST00000534771 CNTD2Q9H8S5 307 aa1.9□□□□□ -2.11
COPB1-212ENST00000534771 CRTAC1Q9NQ79 661 aa1.9□□□□□ -2.11
COPB1-212ENST00000534771 TJP2Q9UDY2 1190 aa1.9□□□□□ -2.11
COPB1-212ENST00000534771 EBF1Q9UH73 591 aa1.9□□□□□ -2.11
COPB1-212ENST00000534771 PCDHA11Q9Y5I1 949 aa1.9□□□□□ -2.11
COPB1-212ENST00000534771 ABLIM1O14639 778 aa1.89□□□□□ -2.11
COPB1-212ENST00000534771 LRRN2O75325 713 aa1.89□□□□□ -2.11
COPB1-212ENST00000534771 CELA3AP09093 270 aa1.89□□□□□ -2.11
COPB1-212ENST00000534771 VIPR1P32241 457 aa1.89□□□□□ -2.11
COPB1-212ENST00000534771 TEKQ02763 1124 aa1.89□□□□□ -2.11
COPB1-212ENST00000534771 DPTQ07507 201 aa1.89□□□□□ -2.11
COPB1-212ENST00000534771 DSC3Q14574 896 aa1.89□□□□□ -2.11
COPB1-212ENST00000534771 ENOX2Q16206 610 aaKnown RBP1.89□□□□□ -2.11
COPB1-212ENST00000534771 CLEC16AQ2KHT3 1053 aa1.89□□□□□ -2.11
COPB1-212ENST00000534771 LCE1AQ5T7P2 110 aa1.89□□□□□ -2.11
COPB1-212ENST00000534771 OLFML2BQ68BL8 750 aa1.89□□□□□ -2.11
COPB1-212ENST00000534771 TTBK2Q6IQ55 1244 aa1.89□□□□□ -2.11
COPB1-212ENST00000534771 SV2BQ7L1I2 683 aa1.89□□□□□ -2.11
COPB1-212ENST00000534771 NLRX1Q86UT6 975 aa1.89□□□□□ -2.11
COPB1-212ENST00000534771 TXNDC2Q86VQ3 553 aa1.89□□□□□ -2.11
COPB1-212ENST00000534771 FAM129CQ86XR2 697 aa1.89□□□□□ -2.11
COPB1-212ENST00000534771 DNAJB8Q8NHS0 232 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms