RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 KIAA1755Q5JYT7 1200 aa11.2□□□□□ -0.62
VPS26B-207ENST00000532160 TMED8Q6PL24 325 aaPredicted RBP11.2□□□□□ -0.62
VPS26B-207ENST00000532160 CWC27Q6UX04 472 aaKnown RBP11.2□□□□□ -0.62
VPS26B-207ENST00000532160 TDHQ8IZJ6 230 aa11.2□□□□□ -0.62
VPS26B-207ENST00000532160 LCORLQ8N3X6 602 aa11.2□□□□□ -0.62
VPS26B-207ENST00000532160 TRPV1Q8NER1 839 aa11.2□□□□□ -0.62
VPS26B-207ENST00000532160 APPBP2Q92624 585 aa11.2□□□□□ -0.62
VPS26B-207ENST00000532160 IL25Q9H293 177 aa11.2□□□□□ -0.62
VPS26B-207ENST00000532160 ARMT1Q9H993 441 aa11.2□□□□□ -0.62
VPS26B-207ENST00000532160 MCM9Q9NXL9 1143 aa11.2□□□□□ -0.62
VPS26B-207ENST00000532160 ZNF236Q9UL36 1845 aa11.2□□□□□ -0.62
VPS26B-207ENST00000532160 PARP14Q460N5 1801 aa11.19□□□□□ -0.62
VPS26B-207ENST00000532160 SMIM22K7EJ46 135 aa11.19□□□□□ -0.62
VPS26B-207ENST00000532160 MPHOSPH10O00566 681 aaKnown RBP11.19□□□□□ -0.62
VPS26B-207ENST00000532160 PRKAB2O43741 272 aa11.19□□□□□ -0.62
VPS26B-207ENST00000532160 IGHA2P01877 340 aa11.19□□□□□ -0.62
VPS26B-207ENST00000532160 ZFYP08048 801 aaPredicted RBP11.19□□□□□ -0.62
VPS26B-207ENST00000532160 HOXC6P09630 235 aa11.19□□□□□ -0.62
VPS26B-207ENST00000532160 CYP2C19P33261 490 aa11.19□□□□□ -0.62
VPS26B-207ENST00000532160 MDM2Q00987 491 aaPredicted RBP11.19□□□□□ -0.62
VPS26B-207ENST00000532160 LRIT3Q3SXY7 679 aa11.19□□□□□ -0.62
VPS26B-207ENST00000532160 ZMYM1Q5SVZ6 1142 aa11.19□□□□□ -0.62
VPS26B-207ENST00000532160 MFSD14CQ5VZR4 134 aa11.19□□□□□ -0.62
VPS26B-207ENST00000532160 CLEC10AQ8IUN9 316 aa11.19□□□□□ -0.62
VPS26B-207ENST00000532160 SLC17A8Q8NDX2 589 aa11.19□□□□□ -0.62
VPS26B-207ENST00000532160 DYNLL2Q96FJ2 89 aa11.19□□□□□ -0.62
VPS26B-207ENST00000532160 MOV10L1Q9BXT6 1211 aaKnown RBP11.19□□□□□ -0.62
VPS26B-207ENST00000532160 CRNKL1Q9BZJ0 848 aaKnown RBP11.19□□□□□ -0.62
VPS26B-207ENST00000532160 UBE2OQ9C0C9 1292 aaKnown RBP11.19□□□□□ -0.62
VPS26B-207ENST00000532160 DCP1AQ9NPI6 582 aaPredicted RBP11.19□□□□□ -0.62
VPS26B-207ENST00000532160 DIAPH3Q9NSV4 1193 aa11.19□□□□□ -0.62
VPS26B-207ENST00000532160 DDX20Q9UHI6 824 aaKnown RBP11.19□□□□□ -0.62
VPS26B-207ENST00000532160 IVNS1ABPQ9Y6Y0 642 aa11.19□□□□□ -0.62
VPS26B-207ENST00000532160 MYH7P12883 1935 aa11.19□□□□□ -0.62
VPS26B-207ENST00000532160 ZNFX1Q9P2E3 1918 aaKnown RBP11.18□□□□□ -0.62
VPS26B-207ENST00000532160 GPAA1O43292 621 aa11.18□□□□□ -0.62
VPS26B-207ENST00000532160 CHMLP26374 656 aa11.18□□□□□ -0.62
VPS26B-207ENST00000532160 ATP2B2Q01814 1243 aa11.18□□□□□ -0.62
VPS26B-207ENST00000532160 LRRFIP1Q32MZ4 808 aaKnown RBP11.18□□□□□ -0.62
VPS26B-207ENST00000532160 ZNF589Q86UQ0 364 aaPredicted RBP11.18□□□□□ -0.62
VPS26B-207ENST00000532160 DEFB123Q8N688 67 aa11.18□□□□□ -0.62
VPS26B-207ENST00000532160 TANGO6Q9C0B7 1094 aa11.18□□□□□ -0.62
VPS26B-207ENST00000532160 SENP6Q9GZR1 1112 aaPredicted RBP11.18□□□□□ -0.62
VPS26B-207ENST00000532160 SPATC1LQ9H0A9 340 aa11.18□□□□□ -0.62
VPS26B-207ENST00000532160 COL11A1P12107 1806 aaPredicted RBP11.18□□□□□ -0.62
VPS26B-207ENST00000532160 EYSQ5T1H1 3165 aa11.17□□□□□ -0.62
VPS26B-207ENST00000532160 LTBP2Q14767 1821 aa11.17□□□□□ -0.62
VPS26B-207ENST00000532160 CDH23Q9H251 3354 aa11.17□□□□□ -0.62
VPS26B-207ENST00000532160 CYP2D7A0A087X1C5 515 aa11.17□□□□□ -0.62
VPS26B-207ENST00000532160 CYBAP13498 195 aa11.17□□□□□ -0.62
VPS26B-207ENST00000532160 AKR1B1P15121 316 aa11.17□□□□□ -0.62
VPS26B-207ENST00000532160 ERCC3P19447 782 aa11.17□□□□□ -0.62
VPS26B-207ENST00000532160 ADORA2AP29274 412 aa11.17□□□□□ -0.62
VPS26B-207ENST00000532160 CNGA1P29973 690 aa11.17□□□□□ -0.62
VPS26B-207ENST00000532160 ATN1P54259 1190 aaPredicted RBP11.17□□□□□ -0.62
VPS26B-207ENST00000532160 COG2Q14746 738 aa11.17□□□□□ -0.62
VPS26B-207ENST00000532160 GPR153Q6NV75 609 aa11.17□□□□□ -0.62
VPS26B-207ENST00000532160 SIAH1Q8IUQ4 282 aa11.17□□□□□ -0.62
VPS26B-207ENST00000532160 SPICE1Q8N0Z3 855 aa11.17□□□□□ -0.62
VPS26B-207ENST00000532160 LPAR1Q92633 364 aa11.17□□□□□ -0.62
VPS26B-207ENST00000532160 BACH2Q9BYV9 841 aa11.17□□□□□ -0.62
VPS26B-207ENST00000532160 SMCHD1A6NHR9 2005 aa11.17□□□□□ -0.62
VPS26B-207ENST00000532160 COBLO75128 1261 aa11.16□□□□□ -0.62
VPS26B-207ENST00000532160 CDC45O75419 566 aa11.16□□□□□ -0.62
VPS26B-207ENST00000532160 MCMDC2Q4G0Z9 681 aa11.16□□□□□ -0.62
VPS26B-207ENST00000532160 VPS53Q5VIR6 699 aa11.16□□□□□ -0.62
VPS26B-207ENST00000532160 ANO1Q5XXA6 986 aa11.16□□□□□ -0.62
VPS26B-207ENST00000532160 TMEM179Q6ZVK1 233 aa11.16□□□□□ -0.62
VPS26B-207ENST00000532160 DPP9Q86TI2 863 aa11.16□□□□□ -0.62
VPS26B-207ENST00000532160 ATG4CQ96DT6 458 aa11.16□□□□□ -0.62
VPS26B-207ENST00000532160 STRBPQ96SI9 672 aaKnown RBP11.16□□□□□ -0.62
VPS26B-207ENST00000532160 HELLSQ9NRZ9 838 aa11.16□□□□□ -0.62
VPS26B-207ENST00000532160 SLC4A4Q9Y6R1 1079 aa11.16□□□□□ -0.62
VPS26B-207ENST00000532160 HIP1O00291 1037 aa11.15□□□□□ -0.62
VPS26B-207ENST00000532160 DNM1LO00429 736 aa11.15□□□□□ -0.62
VPS26B-207ENST00000532160 DLL1O00548 723 aa11.15□□□□□ -0.62
VPS26B-207ENST00000532160 MSCO60682 206 aa11.15□□□□□ -0.62
VPS26B-207ENST00000532160 FLOT1O75955 427 aa11.15□□□□□ -0.62
VPS26B-207ENST00000532160 RTP1P59025 263 aa11.15□□□□□ -0.62
VPS26B-207ENST00000532160 ICA1Q05084 483 aa11.15□□□□□ -0.62
VPS26B-207ENST00000532160 PLS1Q14651 629 aa11.15□□□□□ -0.62
VPS26B-207ENST00000532160 GJC2Q5T442 439 aaPredicted RBP11.15□□□□□ -0.62
VPS26B-207ENST00000532160 OLFML2BQ68BL8 750 aa11.15□□□□□ -0.62
VPS26B-207ENST00000532160 VCPKMTQ9H867 229 aa11.15□□□□□ -0.62
VPS26B-207ENST00000532160 MTMR10Q9NXD2 777 aa11.15□□□□□ -0.62
VPS26B-207ENST00000532160 HOXC10Q9NYD6 342 aa11.15□□□□□ -0.62
VPS26B-207ENST00000532160 SWAP70Q9UH65 585 aa11.15□□□□□ -0.62
VPS26B-207ENST00000532160 VCANP13611 3396 aa11.15□□□□□ -0.62
VPS26B-207ENST00000532160 PLXNA1Q9UIW2 1896 aa11.15□□□□□ -0.63
VPS26B-207ENST00000532160 CCDC171Q6TFL3 1326 aa11.14□□□□□ -0.63
VPS26B-207ENST00000532160 FOXP2O15409 715 aa11.14□□□□□ -0.63
VPS26B-207ENST00000532160 APPP05067 770 aa11.14□□□□□ -0.63
VPS26B-207ENST00000532160 CDK8P49336 464 aa11.14□□□□□ -0.63
VPS26B-207ENST00000532160 PRAMEF19Q5SWL8 479 aa11.14□□□□□ -0.63
VPS26B-207ENST00000532160 C12orf60Q5U649 245 aa11.14□□□□□ -0.63
VPS26B-207ENST00000532160 MB21D1Q8N884 522 aa11.14□□□□□ -0.63
VPS26B-207ENST00000532160 SHCBP1Q8NEM2 672 aa11.14□□□□□ -0.63
VPS26B-207ENST00000532160 ARHGEF10LQ9HCE6 1279 aa11.14□□□□□ -0.63
VPS26B-207ENST00000532160 EPB41L4AQ9HCS5 686 aaPredicted RBP11.14□□□□□ -0.63
VPS26B-207ENST00000532160 FBXO28Q9NVF7 368 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms