RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 CCAR2Q8N163 923 aaKnown RBP13.14□□□□□ -0.31
USP35-207ENST00000530546 GPKOWQ92917 476 aaPredicted RBP eCLIP13.14□□□□□ -0.31
USP35-207ENST00000530546 CEP131Q9UPN4 1083 aa13.14□□□□□ -0.31
USP35-207ENST00000530546 PCDHA5Q9Y5H7 936 aa13.14□□□□□ -0.31
USP35-207ENST00000530546 USP27XA6NNY8 438 aa13.14□□□□□ -0.31
USP35-207ENST00000530546 SCG2P13521 617 aa13.14□□□□□ -0.31
USP35-207ENST00000530546 NOP2P46087 812 aaKnown RBP13.14□□□□□ -0.31
USP35-207ENST00000530546 PLA2G4AP47712 749 aa13.14□□□□□ -0.31
USP35-207ENST00000530546 PPEF1O14829 653 aaPredicted RBP13.14□□□□□ -0.31
USP35-207ENST00000530546 ZRANB2O95218 330 aaKnown RBP eCLIP13.14□□□□□ -0.31
USP35-207ENST00000530546 PIK3AP1Q6ZUJ8 805 aa13.14□□□□□ -0.31
USP35-207ENST00000530546 PRR29P0C7W0 189 aa13.13□□□□□ -0.31
USP35-207ENST00000530546 GOLGA8HP0CJ92 632 aa13.13□□□□□ -0.31
USP35-207ENST00000530546 IL1R1P14778 569 aa13.13□□□□□ -0.31
USP35-207ENST00000530546 KIF5BP33176 963 aa13.13□□□□□ -0.31
USP35-207ENST00000530546 PPP4CP60510 307 aa13.13□□□□□ -0.31
USP35-207ENST00000530546 ZNF827Q17R98 1081 aa13.13□□□□□ -0.31
USP35-207ENST00000530546 C15orf52Q6ZUT6 534 aaKnown RBP13.13□□□□□ -0.31
USP35-207ENST00000530546 RASGRP2Q7LDG7 609 aa13.13□□□□□ -0.31
USP35-207ENST00000530546 IFNKQ9P0W0 207 aa13.13□□□□□ -0.31
USP35-207ENST00000530546 TUBE1Q9UJT0 475 aa13.13□□□□□ -0.31
USP35-207ENST00000530546 SRPRBQ9Y5M8 271 aaKnown RBP13.13□□□□□ -0.31
USP35-207ENST00000530546 FAM237AA0A1B0GTK4 181 aa13.13□□□□□ -0.31
USP35-207ENST00000530546 PICALMQ13492 652 aa13.13□□□□□ -0.31
USP35-207ENST00000530546 MSL1Q68DK7 614 aa13.13□□□□□ -0.31
USP35-207ENST00000530546 MXD3Q9BW11 206 aa13.13□□□□□ -0.31
USP35-207ENST00000530546 CPVLQ9H3G5 476 aa13.13□□□□□ -0.31
USP35-207ENST00000530546 CCDC88AQ3V6T2 1871 aa13.12□□□□□ -0.31
USP35-207ENST00000530546 CASQ1P31415 396 aa13.12□□□□□ -0.31
USP35-207ENST00000530546 NPY5RQ15761 445 aa13.12□□□□□ -0.31
USP35-207ENST00000530546 DOK7Q18PE1 504 aa13.12□□□□□ -0.31
USP35-207ENST00000530546 HSP90AA4PQ58FG1 418 aa13.12□□□□□ -0.31
USP35-207ENST00000530546 TTC38Q5R3I4 469 aa13.12□□□□□ -0.31
USP35-207ENST00000530546 TMCO3Q6UWJ1 677 aa13.12□□□□□ -0.31
USP35-207ENST00000530546 DHX58Q96C10 678 aa13.12□□□□□ -0.31
USP35-207ENST00000530546 EPSTI1Q96J88 318 aa13.12□□□□□ -0.31
USP35-207ENST00000530546 RASA1P20936 1047 aa13.12□□□□□ -0.31
USP35-207ENST00000530546 HOXA10P31260 410 aaPredicted RBP13.12□□□□□ -0.31
USP35-207ENST00000530546 TMED8Q6PL24 325 aaPredicted RBP13.12□□□□□ -0.31
USP35-207ENST00000530546 SYT10Q6XYQ8 523 aa13.12□□□□□ -0.31
USP35-207ENST00000530546 DGKHQ86XP1 1220 aa13.12□□□□□ -0.31
USP35-207ENST00000530546 RASGRP4Q8TDF6 673 aa13.12□□□□□ -0.31
USP35-207ENST00000530546 SECISBP2LQ93073 1101 aaKnown RBP13.12□□□□□ -0.31
USP35-207ENST00000530546 CRAMP1Q96RY5 1269 aa13.12□□□□□ -0.31
USP35-207ENST00000530546 XPO4Q9C0E2 1151 aaKnown RBP13.12□□□□□ -0.31
USP35-207ENST00000530546 GPR75-ASB3A0A0A6YYF3 556 aa13.11□□□□□ -0.31
USP35-207ENST00000530546 APBA3O96018 575 aa13.11□□□□□ -0.31
USP35-207ENST00000530546 ATP1A3P13637 1013 aa13.11□□□□□ -0.31
USP35-207ENST00000530546 CCZ1BP86790 482 aa13.11□□□□□ -0.31
USP35-207ENST00000530546 CCZ1P86791 482 aaPredicted RBP13.11□□□□□ -0.31
USP35-207ENST00000530546 NCAPHQ15003 741 aa13.11□□□□□ -0.31
USP35-207ENST00000530546 POSTNQ15063 836 aa13.11□□□□□ -0.31
USP35-207ENST00000530546 PFKFB3Q16875 520 aaPredicted RBP13.11□□□□□ -0.31
USP35-207ENST00000530546 ERCC6LQ2NKX8 1250 aa13.11□□□□□ -0.31
USP35-207ENST00000530546 CCDC93Q567U6 631 aa13.11□□□□□ -0.31
USP35-207ENST00000530546 UBR3Q6ZT12 1888 aa13.11□□□□□ -0.31
USP35-207ENST00000530546 COL23A1Q86Y22 540 aaPredicted RBP13.11□□□□□ -0.31
USP35-207ENST00000530546 CERS3Q8IU89 383 aa13.11□□□□□ -0.31
USP35-207ENST00000530546 TMEM47Q9BQJ4 181 aa13.11□□□□□ -0.31
USP35-207ENST00000530546 UBXN6Q9BZV1 441 aa13.11□□□□□ -0.31
USP35-207ENST00000530546 VWA3AA6NCI4 1184 aa13.11□□□□□ -0.31
USP35-207ENST00000530546 MYO1CO00159 1063 aa13.11□□□□□ -0.31
USP35-207ENST00000530546 MCM7P33993 719 aa13.11□□□□□ -0.31
USP35-207ENST00000530546 AFMP43652 599 aa13.11□□□□□ -0.31
USP35-207ENST00000530546 CDK8P49336 464 aa13.11□□□□□ -0.31
USP35-207ENST00000530546 GSDMDP57764 484 aa13.11□□□□□ -0.31
USP35-207ENST00000530546 EYA3Q99504 573 aa13.11□□□□□ -0.31
USP35-207ENST00000530546 BPIFA3Q9BQP9 254 aa13.11□□□□□ -0.31
USP35-207ENST00000530546 FLT1P17948 1338 aa13.11□□□□□ -0.31
USP35-207ENST00000530546 MYH6P13533 1939 aa13.11□□□□□ -0.31
USP35-207ENST00000530546 TPM1P09493 284 aa13.11□□□□□ -0.31
USP35-207ENST00000530546 MMP14P50281 582 aa13.11□□□□□ -0.31
USP35-207ENST00000530546 PTGDRQ13258 359 aa13.11□□□□□ -0.31
USP35-207ENST00000530546 TMC6Q7Z403 805 aa13.11□□□□□ -0.31
USP35-207ENST00000530546 NEK11Q8NG66 645 aa13.11□□□□□ -0.31
USP35-207ENST00000530546 BCCIPQ9P287 314 aaKnown RBP eCLIP13.11□□□□□ -0.31
USP35-207ENST00000530546 HOOK1Q9UJC3 728 aaKnown RBP13.11□□□□□ -0.31
USP35-207ENST00000530546 CASP1P29466 404 aa13.1□□□□□ -0.31
USP35-207ENST00000530546 ZSCAN26Q16670 478 aa13.1□□□□□ -0.31
USP35-207ENST00000530546 PTPN21Q16825 1174 aa13.1□□□□□ -0.31
USP35-207ENST00000530546 GOLGA6L1Q8N7Z2 621 aa13.1□□□□□ -0.31
USP35-207ENST00000530546 TNFRSF25Q93038 417 aa13.1□□□□□ -0.31
USP35-207ENST00000530546 ZC3H12CQ9C0D7 883 aaKnown RBP13.1□□□□□ -0.31
USP35-207ENST00000530546 ZNF219Q9P2Y4 722 aaPredicted RBP13.1□□□□□ -0.31
USP35-207ENST00000530546 MAN1B1Q9UKM7 699 aa13.1□□□□□ -0.31
USP35-207ENST00000530546 MAST2Q6P0Q8 1798 aa13.1□□□□□ -0.31
USP35-207ENST00000530546 KIAA1551Q9HCM1 1747 aa13.1□□□□□ -0.31
USP35-207ENST00000530546 A0A087X0B3 334 aa13.1□□□□□ -0.31
USP35-207ENST00000530546 G3V3G9 751 aa13.1□□□□□ -0.31
USP35-207ENST00000530546 BMP6P22004 513 aa13.1□□□□□ -0.31
USP35-207ENST00000530546 KCNJ6P48051 423 aa13.1□□□□□ -0.31
USP35-207ENST00000530546 RHBDL3P58872 404 aa13.1□□□□□ -0.31
USP35-207ENST00000530546 ARHGAP29Q52LW3 1261 aa13.1□□□□□ -0.31
USP35-207ENST00000530546 DCAF8Q5TAQ9 597 aa13.1□□□□□ -0.31
USP35-207ENST00000530546 ICE2Q659A1 982 aa13.1□□□□□ -0.31
USP35-207ENST00000530546 HEATR3Q7Z4Q2 680 aa13.1□□□□□ -0.31
USP35-207ENST00000530546 SP8Q8IXZ3 490 aa13.1□□□□□ -0.31
USP35-207ENST00000530546 GOLGA5Q8TBA6 731 aa13.1□□□□□ -0.31
USP35-207ENST00000530546 SYMPKQ92797 1274 aaKnown RBP13.1□□□□□ -0.31
USP35-207ENST00000530546 SMARCE1Q969G3 411 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms