RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-231ENST00000529540 LARP1BQ659C4 914 aaKnown RBP16.79■□□□□ 0.28
NR1H3-231ENST00000529540 SCYL3Q8IZE3 742 aa16.79■□□□□ 0.28
NR1H3-231ENST00000529540 ANKRD7Q92527 254 aa16.79■□□□□ 0.28
NR1H3-231ENST00000529540 ARHGEF10LQ9HCE6 1279 aa16.79■□□□□ 0.28
NR1H3-231ENST00000529540 PICK1Q9NRD5 415 aa16.79■□□□□ 0.28
NR1H3-231ENST00000529540 SSC5DA1L4H1 1573 aa16.79■□□□□ 0.28
NR1H3-231ENST00000529540 GREB1LQ9C091 1923 aaPredicted RBP16.79■□□□□ 0.28
NR1H3-231ENST00000529540 POLR2AP24928 1970 aaKnown RBP16.79■□□□□ 0.28
NR1H3-231ENST00000529540 DHX16O60231 1041 aaKnown RBP16.78■□□□□ 0.28
NR1H3-231ENST00000529540 DDAH1O94760 285 aa16.78■□□□□ 0.28
NR1H3-231ENST00000529540 GDF11O95390 407 aa16.78■□□□□ 0.28
NR1H3-231ENST00000529540 DMTNQ08495 405 aa16.78■□□□□ 0.28
NR1H3-231ENST00000529540 MAP3K14Q99558 947 aa16.78■□□□□ 0.28
NR1H3-231ENST00000529540 AS3MTQ9HBK9 375 aa16.78■□□□□ 0.28
NR1H3-231ENST00000529540 CSADQ9Y600 493 aa16.78■□□□□ 0.28
NR1H3-231ENST00000529540 KLF18A0A0U1RQI7 1052 aa16.78■□□□□ 0.28
NR1H3-231ENST00000529540 CCDC196A0A1B0GTZ2 297 aa16.78■□□□□ 0.28
NR1H3-231ENST00000529540 LIG1P18858 919 aa16.78■□□□□ 0.28
NR1H3-231ENST00000529540 MAP3K9P80192 1104 aa16.78■□□□□ 0.28
NR1H3-231ENST00000529540 ANKRD13AQ8IZ07 590 aa16.78■□□□□ 0.28
NR1H3-231ENST00000529540 NECAB1Q8N987 351 aa16.78■□□□□ 0.28
NR1H3-231ENST00000529540 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.78■□□□□ 0.28
NR1H3-231ENST00000529540 MKL1Q969V6 931 aa16.78■□□□□ 0.28
NR1H3-231ENST00000529540 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.78■□□□□ 0.28
NR1H3-231ENST00000529540 CLSTN2Q9H4D0 955 aa16.78■□□□□ 0.28
NR1H3-231ENST00000529540 RIOK3O14730 519 aaKnown RBP16.77■□□□□ 0.28
NR1H3-231ENST00000529540 ZBTB43O43298 467 aa16.77■□□□□ 0.28
NR1H3-231ENST00000529540 USP2O75604 605 aaPredicted RBP16.77■□□□□ 0.28
NR1H3-231ENST00000529540 YY1P25490 414 aa16.77■□□□□ 0.28
NR1H3-231ENST00000529540 APOBRQ0VD83 1088 aa16.77■□□□□ 0.28
NR1H3-231ENST00000529540 COL9A3Q14050 684 aaPredicted RBP16.77■□□□□ 0.28
NR1H3-231ENST00000529540 TTLL12Q14166 644 aaPredicted RBP16.77■□□□□ 0.28
NR1H3-231ENST00000529540 SEPT2Q15019 361 aa16.77■□□□□ 0.28
NR1H3-231ENST00000529540 RCSD1Q6JBY9 416 aa16.77■□□□□ 0.28
NR1H3-231ENST00000529540 APOA5Q6Q788 366 aa16.77■□□□□ 0.28
NR1H3-231ENST00000529540 PNMA1Q8ND90 353 aa16.77■□□□□ 0.28
NR1H3-231ENST00000529540 SMC1BQ8NDV3 1235 aa16.77■□□□□ 0.28
NR1H3-231ENST00000529540 GOLGA8BA8MQT2 603 aa16.76■□□□□ 0.27
NR1H3-231ENST00000529540 USP17L5A8MUK1 530 aa16.76■□□□□ 0.27
NR1H3-231ENST00000529540 NMT2O60551 498 aa16.76■□□□□ 0.27
NR1H3-231ENST00000529540 CAVIN2O95810 425 aa16.76■□□□□ 0.27
NR1H3-231ENST00000529540 PLA2G4DQ86XP0 818 aa16.76■□□□□ 0.27
NR1H3-231ENST00000529540 ZNF654Q8IZM8 581 aa16.76■□□□□ 0.27
NR1H3-231ENST00000529540 NKX2-3Q8TAU0 364 aa16.76■□□□□ 0.27
NR1H3-231ENST00000529540 TSC1Q92574 1164 aa16.76■□□□□ 0.27
NR1H3-231ENST00000529540 NID2Q14112 1375 aa16.76■□□□□ 0.27
NR1H3-231ENST00000529540 DOCK1Q14185 1865 aa16.76■□□□□ 0.27
NR1H3-231ENST00000529540 SLURP2P0DP57 97 aa16.75■□□□□ 0.27
NR1H3-231ENST00000529540 CDC25BP30305 580 aa16.75■□□□□ 0.27
NR1H3-231ENST00000529540 KIF5BP33176 963 aa16.75■□□□□ 0.27
NR1H3-231ENST00000529540 METAP2P50579 478 aaKnown RBP eCLIP16.75■□□□□ 0.27
NR1H3-231ENST00000529540 PLCB2Q00722 1185 aa16.75■□□□□ 0.27
NR1H3-231ENST00000529540 CPLX2Q6PUV4 134 aaKnown RBP16.75■□□□□ 0.27
NR1H3-231ENST00000529540 C2orf69Q8N8R5 385 aa16.75■□□□□ 0.27
NR1H3-231ENST00000529540 TMEM47Q9BQJ4 181 aa16.75■□□□□ 0.27
NR1H3-231ENST00000529540 TNMDQ9H2S6 317 aa16.75■□□□□ 0.27
NR1H3-231ENST00000529540 CBX8Q9HC52 389 aa16.75■□□□□ 0.27
NR1H3-231ENST00000529540 RBM28Q9NW13 759 aaKnown RBP16.75■□□□□ 0.27
NR1H3-231ENST00000529540 CLIP2Q9UDT6 1046 aa16.75■□□□□ 0.27
NR1H3-231ENST00000529540 NAP1L2Q9ULW6 460 aaPredicted RBP16.75■□□□□ 0.27
NR1H3-231ENST00000529540 PAPPA2Q9BXP8 1791 aa16.75■□□□□ 0.27
NR1H3-231ENST00000529540 KIF3CO14782 793 aa16.75■□□□□ 0.27
NR1H3-231ENST00000529540 PFKFB2O60825 505 aa16.75■□□□□ 0.27
NR1H3-231ENST00000529540 TOMM70O94826 608 aa16.75■□□□□ 0.27
NR1H3-231ENST00000529540 EEF2P13639 858 aaKnown RBP16.75■□□□□ 0.27
NR1H3-231ENST00000529540 PTGS1P23219 599 aa16.75■□□□□ 0.27
NR1H3-231ENST00000529540 PDIA3P30101 505 aaKnown RBP16.75■□□□□ 0.27
NR1H3-231ENST00000529540 INPP5BP32019 993 aa16.75■□□□□ 0.27
NR1H3-231ENST00000529540 GUCY1A2P33402 732 aa16.75■□□□□ 0.27
NR1H3-231ENST00000529540 ZNF75DP51815 510 aa16.75■□□□□ 0.27
NR1H3-231ENST00000529540 RRP1BQ14684 758 aaKnown RBP16.75■□□□□ 0.27
NR1H3-231ENST00000529540 SPC24Q8NBT2 197 aa16.75■□□□□ 0.27
NR1H3-231ENST00000529540 CTCFLQ8NI51 663 aaPredicted RBP16.75■□□□□ 0.27
NR1H3-231ENST00000529540 RBM46Q8TBY0 533 aaKnown RBP16.75■□□□□ 0.27
NR1H3-231ENST00000529540 LEO1Q8WVC0 666 aaPredicted RBP16.75■□□□□ 0.27
NR1H3-231ENST00000529540 GTPBP4Q9BZE4 634 aaKnown RBP16.75■□□□□ 0.27
NR1H3-231ENST00000529540 GOPCQ9HD26 462 aa16.75■□□□□ 0.27
NR1H3-231ENST00000529540 CDKL5O76039 1030 aa16.74■□□□□ 0.27
NR1H3-231ENST00000529540 ITGBL1O95965 494 aaPredicted RBP16.74■□□□□ 0.27
NR1H3-231ENST00000529540 GNAQP50148 359 aa16.74■□□□□ 0.27
NR1H3-231ENST00000529540 USP14P54578 494 aa16.74■□□□□ 0.27
NR1H3-231ENST00000529540 ATP2B2Q01814 1243 aa16.74■□□□□ 0.27
NR1H3-231ENST00000529540 TPRNQ4KMQ1 711 aa16.74■□□□□ 0.27
NR1H3-231ENST00000529540 MICU3Q86XE3 530 aa16.74■□□□□ 0.27
NR1H3-231ENST00000529540 PDCL2Q8N4E4 241 aa16.74■□□□□ 0.27
NR1H3-231ENST00000529540 GMCL1P1Q8NEA9 526 aa16.74■□□□□ 0.27
NR1H3-231ENST00000529540 SPATA32Q96LK8 384 aa16.74■□□□□ 0.27
NR1H3-231ENST00000529540 WDR18Q9BV38 432 aa16.74■□□□□ 0.27
NR1H3-231ENST00000529540 GBA2Q9HCG7 927 aaPredicted RBP16.74■□□□□ 0.27
NR1H3-231ENST00000529540 GPHNQ9NQX3 736 aaPredicted RBP16.74■□□□□ 0.27
NR1H3-231ENST00000529540 GOLGA8AA7E2F4 631 aa16.73■□□□□ 0.27
NR1H3-231ENST00000529540 ZSCAN20P17040 1043 aaPredicted RBP16.73■□□□□ 0.27
NR1H3-231ENST00000529540 TROAPQ12815 778 aa16.73■□□□□ 0.27
NR1H3-231ENST00000529540 ANO6Q4KMQ2 910 aa16.73■□□□□ 0.27
NR1H3-231ENST00000529540 GTF3C6Q969F1 213 aa16.73■□□□□ 0.27
NR1H3-231ENST00000529540 ZNF408Q9H9D4 720 aa16.73■□□□□ 0.27
NR1H3-231ENST00000529540 DACT1Q9NYF0 836 aa16.73■□□□□ 0.27
NR1H3-231ENST00000529540 TMX2Q9Y320 296 aa16.73■□□□□ 0.27
NR1H3-231ENST00000529540 ATAD5Q96QE3 1844 aa16.73■□□□□ 0.27
NR1H3-231ENST00000529540 SMTNL1A8MU46 457 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms