RNA–Protein interactions for RNA: ENST00000526481.6

CTSB-211, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-211ENST00000526481 GRM4Q14833 912 aa16.95■□□□□ 0.3
CTSB-211ENST00000526481 CATIPQ7Z7H3 387 aa16.95■□□□□ 0.3
CTSB-211ENST00000526481 SAPCD2Q86UD0 394 aa16.95■□□□□ 0.3
CTSB-211ENST00000526481 RASAL3Q86YV0 1011 aa16.95■□□□□ 0.3
CTSB-211ENST00000526481 HSCBQ8IWL3 235 aa16.95■□□□□ 0.3
CTSB-211ENST00000526481 SPICE1Q8N0Z3 855 aa16.95■□□□□ 0.3
CTSB-211ENST00000526481 GMCL1P1Q8NEA9 526 aa16.95■□□□□ 0.3
CTSB-211ENST00000526481 TMX3Q96JJ7 454 aa16.95■□□□□ 0.3
CTSB-211ENST00000526481 KIAA1683Q9H0B3 1180 aa16.95■□□□□ 0.3
CTSB-211ENST00000526481 VCPKMTQ9H867 229 aa16.95■□□□□ 0.3
CTSB-211ENST00000526481 A0A0G2JMZ2 1700 aa16.95■□□□□ 0.3
CTSB-211ENST00000526481 FRMPD2Q68DX3 1309 aaPredicted RBP16.95■□□□□ 0.3
CTSB-211ENST00000526481 TMEM88BA6NKF7 163 aa16.94■□□□□ 0.3
CTSB-211ENST00000526481 USP17L10C9JJH3 530 aa16.94■□□□□ 0.3
CTSB-211ENST00000526481 K7ELQ4 463 aaPredicted RBP16.94■□□□□ 0.3
CTSB-211ENST00000526481 PFKFB2O60825 505 aa16.94■□□□□ 0.3
CTSB-211ENST00000526481 SNHG28P0DPA3 235 aa16.94■□□□□ 0.3
CTSB-211ENST00000526481 CHRM1P11229 460 aaPredicted RBP16.94■□□□□ 0.3
CTSB-211ENST00000526481 CDC27P30260 824 aa16.94■□□□□ 0.3
CTSB-211ENST00000526481 METAP2P50579 478 aaKnown RBP eCLIP16.94■□□□□ 0.32e-6■■□□□ 11.5
CTSB-211ENST00000526481 HMGCS2P54868 508 aa16.94■□□□□ 0.3
CTSB-211ENST00000526481 PPATQ06203 517 aa16.94■□□□□ 0.3
CTSB-211ENST00000526481 SCRN1Q12765 414 aa16.94■□□□□ 0.3
CTSB-211ENST00000526481 SLFN13Q68D06 897 aa16.94■□□□□ 0.3
CTSB-211ENST00000526481 TMTC2Q8N394 836 aa16.94■□□□□ 0.3
CTSB-211ENST00000526481 GTF3C6Q969F1 213 aa16.94■□□□□ 0.3
CTSB-211ENST00000526481 SLC10A4Q96EP9 437 aa16.94■□□□□ 0.3
CTSB-211ENST00000526481 SH2D4AQ9H788 454 aa16.94■□□□□ 0.3
CTSB-211ENST00000526481 FAM217BQ9NTX9 383 aaPredicted RBP16.94■□□□□ 0.3
CTSB-211ENST00000526481 ABT1Q9ULW3 272 aaKnown RBP16.94■□□□□ 0.3
CTSB-211ENST00000526481 UNCXA6NJT0 531 aa16.93■□□□□ 0.3
CTSB-211ENST00000526481 F5H6K3 240 aa16.93■□□□□ 0.3
CTSB-211ENST00000526481 PLEKHA8P1O95397 391 aa16.93■□□□□ 0.3
CTSB-211ENST00000526481 GOLGA8HP0CJ92 632 aa16.93■□□□□ 0.3
CTSB-211ENST00000526481 ANP32AP39687 249 aaKnown RBP16.93■□□□□ 0.3
CTSB-211ENST00000526481 MCM2P49736 904 aa16.93■□□□□ 0.3
CTSB-211ENST00000526481 BACE1P56817 501 aa16.93■□□□□ 0.3
CTSB-211ENST00000526481 KLRC3Q07444 240 aa16.93■□□□□ 0.3
CTSB-211ENST00000526481 RTN1Q16799 776 aa16.93■□□□□ 0.3
CTSB-211ENST00000526481 CCDC96Q2M329 555 aa16.93■□□□□ 0.3
CTSB-211ENST00000526481 SLC35G1Q2M3R5 365 aa16.93■□□□□ 0.3
CTSB-211ENST00000526481 USP17L2Q6R6M4 530 aa16.93■□□□□ 0.3
CTSB-211ENST00000526481 CCDC83Q8IWF9 413 aa16.93■□□□□ 0.3
CTSB-211ENST00000526481 STAG2Q8N3U4 1231 aa16.93■□□□□ 0.3
CTSB-211ENST00000526481 ZNF274Q96GC6 653 aaPredicted RBP16.93■□□□□ 0.3
CTSB-211ENST00000526481 CPVLQ9H3G5 476 aa16.93■□□□□ 0.3
CTSB-211ENST00000526481 GOPCQ9HD26 462 aa16.93■□□□□ 0.3
CTSB-211ENST00000526481 EMILIN3Q9NT22 766 aa16.93■□□□□ 0.3
CTSB-211ENST00000526481 SYNPO2Q9UMS6 1093 aa16.93■□□□□ 0.3
CTSB-211ENST00000526481 KCNH4Q9UQ05 1017 aa16.93■□□□□ 0.3
CTSB-211ENST00000526481 SMCHD1A6NHR9 2005 aa16.92■□□□□ 0.3
CTSB-211ENST00000526481 VCAM1P19320 739 aa16.92■□□□□ 0.3
CTSB-211ENST00000526481 RCAN1P53805 252 aa16.92■□□□□ 0.3
CTSB-211ENST00000526481 FAM83BQ5T0W9 1011 aa16.92■□□□□ 0.3
CTSB-211ENST00000526481 SPRYD7Q5W111 196 aa16.92■□□□□ 0.3
CTSB-211ENST00000526481 SYNE3Q6ZMZ3 975 aa16.92■□□□□ 0.3
CTSB-211ENST00000526481 KCTD1Q719H9 257 aa16.92■□□□□ 0.3
CTSB-211ENST00000526481 IFNL1Q8IU54 200 aa16.92■□□□□ 0.3
CTSB-211ENST00000526481 DCAF4Q8WV16 495 aa16.92■□□□□ 0.3
CTSB-211ENST00000526481 ZSCAN31Q96LW9 406 aaPredicted RBP16.92■□□□□ 0.3
CTSB-211ENST00000526481 SLKQ9H2G2 1235 aaPredicted RBP16.92■□□□□ 0.3
CTSB-211ENST00000526481 GPCPD1Q9NPB8 672 aa16.92■□□□□ 0.3
CTSB-211ENST00000526481 MAD2L2Q9UI95 211 aa16.92■□□□□ 0.3
CTSB-211ENST00000526481 A0A0G2JLL6 359 aaPredicted RBP16.91■□□□□ 0.3
CTSB-211ENST00000526481 PPFIA3O75145 1194 aa16.91■□□□□ 0.3
CTSB-211ENST00000526481 APLP1P51693 650 aa16.91■□□□□ 0.3
CTSB-211ENST00000526481 ZNF543Q08ER8 600 aa16.91■□□□□ 0.3
CTSB-211ENST00000526481 MOGSQ13724 837 aa16.91■□□□□ 0.3
CTSB-211ENST00000526481 SH3D19Q5HYK7 790 aa16.91■□□□□ 0.3
CTSB-211ENST00000526481 TTBK2Q6IQ55 1244 aa16.91■□□□□ 0.3
CTSB-211ENST00000526481 RGMBQ6NW40 437 aa16.91■□□□□ 0.3
CTSB-211ENST00000526481 PRRT2Q7Z6L0 340 aaPredicted RBP16.91■□□□□ 0.3
CTSB-211ENST00000526481 CMTR1Q8N1G2 835 aaKnown RBP16.91■□□□□ 0.3
CTSB-211ENST00000526481 IL27Q8NEV9 243 aa16.91■□□□□ 0.3
CTSB-211ENST00000526481 GMCL1Q96IK5 515 aa16.91■□□□□ 0.3
CTSB-211ENST00000526481 C12orf42Q96LP6 360 aa16.91■□□□□ 0.3
CTSB-211ENST00000526481 SH2B1Q9NRF2 756 aaPredicted RBP16.91■□□□□ 0.3
CTSB-211ENST00000526481 ISY1Q9ULR0 285 aaKnown RBP16.91■□□□□ 0.3
CTSB-211ENST00000526481 TRPC6Q9Y210 931 aa16.91■□□□□ 0.3
CTSB-211ENST00000526481 THSD7BQ9C0I4 1608 aa16.91■□□□□ 0.3
CTSB-211ENST00000526481 CNTNAP5Q8WYK1 1306 aa16.91■□□□□ 0.3
CTSB-211ENST00000526481 PALM3A6NDB9 673 aaPredicted RBP16.9■□□□□ 0.3
CTSB-211ENST00000526481 CTDNEP1O95476 244 aa16.9■□□□□ 0.3
CTSB-211ENST00000526481 SLC10A3P09131 477 aa16.9■□□□□ 0.3
CTSB-211ENST00000526481 PARP1P09874 1014 aaKnown RBP16.9■□□□□ 0.3
CTSB-211ENST00000526481 CALM1P0DP23 149 aa16.9■□□□□ 0.3
CTSB-211ENST00000526481 CALM2P0DP24 149 aa16.9■□□□□ 0.3
CTSB-211ENST00000526481 CALM3P0DP25 149 aa16.9■□□□□ 0.3
CTSB-211ENST00000526481 ADD1P35611 737 aaKnown RBP16.9■□□□□ 0.3
CTSB-211ENST00000526481 SLC1A4P43007 532 aa16.9■□□□□ 0.3
CTSB-211ENST00000526481 ZNF157P51786 506 aaPredicted RBP16.9■□□□□ 0.3
CTSB-211ENST00000526481 USP14P54578 494 aa16.9■□□□□ 0.3
CTSB-211ENST00000526481 TREML2Q5T2D2 321 aa16.9■□□□□ 0.3
CTSB-211ENST00000526481 GADL1Q6ZQY3 521 aa16.9■□□□□ 0.3
CTSB-211ENST00000526481 TMTC3Q6ZXV5 915 aa16.9■□□□□ 0.3
CTSB-211ENST00000526481 NBPF11Q86T75 865 aa16.9■□□□□ 0.3
CTSB-211ENST00000526481 FANCBQ8NB91 859 aa16.9■□□□□ 0.3
CTSB-211ENST00000526481 CTCFLQ8NI51 663 aaPredicted RBP16.9■□□□□ 0.3
CTSB-211ENST00000526481 FAM155AB1AL88 458 aaPredicted RBP16.89■□□□□ 0.29
CTSB-211ENST00000526481 C19orf81C9J6K1 198 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms