RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 GMCL1P1Q8NEA9 526 aa20.65■□□□□ 0.9
PACSIN3-202ENST00000524509 ZSCAN10Q96SZ4 725 aaPredicted RBP20.65■□□□□ 0.9
PACSIN3-202ENST00000524509 USP26Q9BXU7 913 aa20.65■□□□□ 0.9
PACSIN3-202ENST00000524509 ZSWIM5Q9P217 1185 aa20.65■□□□□ 0.9
PACSIN3-202ENST00000524509 MYPNQ86TC9 1320 aa20.64■□□□□ 0.89
PACSIN3-202ENST00000524509 USP17L15C9J2P7 530 aa20.64■□□□□ 0.89
PACSIN3-202ENST00000524509 USP17L13C9JLJ4 530 aa20.64■□□□□ 0.89
PACSIN3-202ENST00000524509 USP17L11C9JVI0 530 aa20.64■□□□□ 0.89
PACSIN3-202ENST00000524509 USP17L18D6R9N7 530 aa20.64■□□□□ 0.89
PACSIN3-202ENST00000524509 USP17L22D6RA61 530 aa20.64■□□□□ 0.89
PACSIN3-202ENST00000524509 USP17L17D6RBQ6 530 aa20.64■□□□□ 0.89
PACSIN3-202ENST00000524509 USP17L19D6RCP7 530 aa20.64■□□□□ 0.89
PACSIN3-202ENST00000524509 USP17L20D6RJB6 530 aa20.64■□□□□ 0.89
PACSIN3-202ENST00000524509 WDR46O15213 610 aaKnown RBP20.64■□□□□ 0.89
PACSIN3-202ENST00000524509 ECM2O94769 699 aaPredicted RBP20.64■□□□□ 0.89
PACSIN3-202ENST00000524509 IRX3P78415 501 aaPredicted RBP20.64■□□□□ 0.89
PACSIN3-202ENST00000524509 USP17L24Q0WX57 530 aa20.64■□□□□ 0.89
PACSIN3-202ENST00000524509 SIAH1Q8IUQ4 282 aa20.64■□□□□ 0.89
PACSIN3-202ENST00000524509 KCNB2Q92953 911 aa20.64■□□□□ 0.89
PACSIN3-202ENST00000524509 RNF208Q9H0X6 261 aa20.64■□□□□ 0.89
PACSIN3-202ENST00000524509 UPF2Q9HAU5 1272 aaKnown RBP20.64■□□□□ 0.89
PACSIN3-202ENST00000524509 EMILIN3Q9NT22 766 aa20.64■□□□□ 0.89
PACSIN3-202ENST00000524509 COL6A3P12111 3177 aa20.63■□□□□ 0.89
PACSIN3-202ENST00000524509 A0A1W2PRG0 241 aa20.63■□□□□ 0.89
PACSIN3-202ENST00000524509 UBXN2AP68543 259 aa20.63■□□□□ 0.89
PACSIN3-202ENST00000524509 MOGSQ13724 837 aa20.63■□□□□ 0.89
PACSIN3-202ENST00000524509 GPAT2Q6NUI2 795 aa20.63■□□□□ 0.89
PACSIN3-202ENST00000524509 SLC17A8Q8NDX2 589 aa20.63■□□□□ 0.89
PACSIN3-202ENST00000524509 ANKS1AQ92625 1134 aa20.63■□□□□ 0.89
PACSIN3-202ENST00000524509 NEK1Q96PY6 1258 aa20.63■□□□□ 0.89
PACSIN3-202ENST00000524509 IL17RBQ9NRM6 502 aa20.63■□□□□ 0.89
PACSIN3-202ENST00000524509 WDR19Q8NEZ3 1342 aa20.62■□□□□ 0.89
PACSIN3-202ENST00000524509 A0A1W2PPC1 479 aa20.62■□□□□ 0.89
PACSIN3-202ENST00000524509 F5H6K3 240 aa20.62■□□□□ 0.89
PACSIN3-202ENST00000524509 DLL1O00548 723 aa20.62■□□□□ 0.89
PACSIN3-202ENST00000524509 VCAM1P19320 739 aa20.62■□□□□ 0.89
PACSIN3-202ENST00000524509 GCLCP48506 637 aaPredicted RBP20.62■□□□□ 0.89
PACSIN3-202ENST00000524509 KLRC3Q07444 240 aa20.62■□□□□ 0.89
PACSIN3-202ENST00000524509 ZYXQ15942 572 aaKnown RBP20.62■□□□□ 0.89
PACSIN3-202ENST00000524509 RCSD1Q6JBY9 416 aa20.62■□□□□ 0.89
PACSIN3-202ENST00000524509 SMCR8Q8TEV9 937 aaPredicted RBP20.62■□□□□ 0.89
PACSIN3-202ENST00000524509 TMEM87BQ96K49 555 aa20.62■□□□□ 0.89
PACSIN3-202ENST00000524509 KAT14Q9H8E8 782 aa20.62■□□□□ 0.89
PACSIN3-202ENST00000524509 HOXC10Q9NYD6 342 aa20.62■□□□□ 0.89
PACSIN3-202ENST00000524509 TACC3Q9Y6A5 838 aa20.62■□□□□ 0.89
PACSIN3-202ENST00000524509 A0A0C4DFX4 3053 aa20.62■□□□□ 0.89
PACSIN3-202ENST00000524509 RAD21O60216 631 aa20.61■□□□□ 0.89
PACSIN3-202ENST00000524509 ANAPC15P60006 121 aa20.61■□□□□ 0.89
PACSIN3-202ENST00000524509 IFIT1BQ5T764 474 aaKnown RBP20.61■□□□□ 0.89
PACSIN3-202ENST00000524509 BIN2Q9UBW5 565 aaPredicted RBP20.61■□□□□ 0.89
PACSIN3-202ENST00000524509 IFIT3O14879 490 aaKnown RBP20.6■□□□□ 0.89
PACSIN3-202ENST00000524509 FARP2O94887 1054 aaPredicted RBP20.6■□□□□ 0.89
PACSIN3-202ENST00000524509 FCGRTP55899 365 aa20.6■□□□□ 0.89
PACSIN3-202ENST00000524509 CATSPERGQ6ZRH7 1159 aa20.6■□□□□ 0.89
PACSIN3-202ENST00000524509 SLAIN1Q8ND83 568 aa20.6■□□□□ 0.89
PACSIN3-202ENST00000524509 U2AF1L4Q8WU68 220 aaKnown RBP20.6■□□□□ 0.89
PACSIN3-202ENST00000524509 GMCL1Q96IK5 515 aa20.6■□□□□ 0.89
PACSIN3-202ENST00000524509 RPAP3Q9H6T3 665 aaPredicted RBP20.6■□□□□ 0.89
PACSIN3-202ENST00000524509 MGAMO43451 1857 aa20.6■□□□□ 0.89
PACSIN3-202ENST00000524509 LAMA4Q16363 1823 aa20.6■□□□□ 0.89
PACSIN3-202ENST00000524509 ATAD5Q96QE3 1844 aa20.6■□□□□ 0.89
PACSIN3-202ENST00000524509 TNKSO95271 1327 aa20.59■□□□□ 0.89
PACSIN3-202ENST00000524509 MYH8P13535 1937 aa20.59■□□□□ 0.89
PACSIN3-202ENST00000524509 FDX1P10109 184 aa20.59■□□□□ 0.89
PACSIN3-202ENST00000524509 BCRP11274 1271 aa20.59■□□□□ 0.89
PACSIN3-202ENST00000524509 CAPN2P17655 700 aa20.59■□□□□ 0.89
PACSIN3-202ENST00000524509 PRKCZQ05513 592 aa20.59■□□□□ 0.89
PACSIN3-202ENST00000524509 COG2Q14746 738 aa20.59■□□□□ 0.89
PACSIN3-202ENST00000524509 WTAPQ15007 396 aa20.59■□□□□ 0.89
PACSIN3-202ENST00000524509 TREML2Q5T2D2 321 aa20.59■□□□□ 0.89
PACSIN3-202ENST00000524509 SLFN13Q68D06 897 aa20.59■□□□□ 0.89
PACSIN3-202ENST00000524509 DHX32Q7L7V1 743 aaKnown RBP20.59■□□□□ 0.89
PACSIN3-202ENST00000524509 CLEC10AQ8IUN9 316 aa20.59■□□□□ 0.89
PACSIN3-202ENST00000524509 MB21D2Q8IYB1 491 aaPredicted RBP20.59■□□□□ 0.89
PACSIN3-202ENST00000524509 DCAF4Q8WV16 495 aa20.59■□□□□ 0.89
PACSIN3-202ENST00000524509 TMEM47Q9BQJ4 181 aa20.59■□□□□ 0.89
PACSIN3-202ENST00000524509 TANGO6Q9C0B7 1094 aa20.59■□□□□ 0.89
PACSIN3-202ENST00000524509 LAMA3Q16787 3333 aa20.59■□□□□ 0.89
PACSIN3-202ENST00000524509 NMT2O60551 498 aa20.58■□□□□ 0.89
PACSIN3-202ENST00000524509 SGPL1O95470 568 aa20.58■□□□□ 0.89
PACSIN3-202ENST00000524509 NDUFB10O96000 172 aa20.58■□□□□ 0.89
PACSIN3-202ENST00000524509 SLC1A4P43007 532 aa20.58■□□□□ 0.89
PACSIN3-202ENST00000524509 C8orf34Q49A92 452 aa20.58■□□□□ 0.89
PACSIN3-202ENST00000524509 TMEM67Q5HYA8 995 aa20.58■□□□□ 0.89
PACSIN3-202ENST00000524509 STOX1Q6ZVD7 989 aa20.58■□□□□ 0.89
PACSIN3-202ENST00000524509 MB21D1Q8N884 522 aa20.58■□□□□ 0.89
PACSIN3-202ENST00000524509 ENAHQ8N8S7 591 aaPredicted RBP20.58■□□□□ 0.89
PACSIN3-202ENST00000524509 CHURC1Q8WUH1 139 aa20.58■□□□□ 0.89
PACSIN3-202ENST00000524509 TM6SF1Q9BZW5 370 aa20.58■□□□□ 0.89
PACSIN3-202ENST00000524509 ASCC2Q9H1I8 757 aaPredicted RBP20.58■□□□□ 0.89
PACSIN3-202ENST00000524509 PRC1O43663 620 aa20.57■□□□□ 0.88
PACSIN3-202ENST00000524509 PLA2G6O60733 806 aa20.57■□□□□ 0.88
PACSIN3-202ENST00000524509 BMP3P12645 472 aa20.57■□□□□ 0.88
PACSIN3-202ENST00000524509 GPATCH4Q5T3I0 446 aaKnown RBP20.57■□□□□ 0.88
PACSIN3-202ENST00000524509 BLOC1S2Q6QNY1 142 aa20.57■□□□□ 0.88
PACSIN3-202ENST00000524509 FAM160B2Q86V87 743 aa20.57■□□□□ 0.88
PACSIN3-202ENST00000524509 SPICE1Q8N0Z3 855 aa20.57■□□□□ 0.88
PACSIN3-202ENST00000524509 LRRC47Q8N1G4 583 aaKnown RBP20.57■□□□□ 0.88
PACSIN3-202ENST00000524509 IL27Q8NEV9 243 aa20.57■□□□□ 0.88
PACSIN3-202ENST00000524509 ZKSCAN3Q9BRR0 538 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms