RNA–Protein interactions for RNA: ENST00000524111.5

SREK1-215, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 4,074 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-215	ENST00000524111	PDE4D	Q08499	809 aa		9.82	□□□□□ -0.84
SREK1-215	ENST00000524111	SEC23A	Q15436	765 aa		9.82	□□□□□ -0.84
SREK1-215	ENST00000524111	TIGD1	Q96MW7	591 aa		9.82	□□□□□ -0.84
SREK1-215	ENST00000524111	TRPM3	Q9HCF6	1732 aa	Predicted RBP	9.82	□□□□□ -0.84
SREK1-215	ENST00000524111	TRIM49B	A6NDI0	452 aa		9.82	□□□□□ -0.84
SREK1-215	ENST00000524111	AKR1B15	C9JRZ8	316 aa	Predicted RBP	9.82	□□□□□ -0.84
SREK1-215	ENST00000524111	PSMA7	O14818	248 aa		9.82	□□□□□ -0.84
SREK1-215	ENST00000524111	CCZ1B	P86790	482 aa		9.82	□□□□□ -0.84
SREK1-215	ENST00000524111	CCZ1	P86791	482 aa	Predicted RBP	9.82	□□□□□ -0.84
SREK1-215	ENST00000524111	USH1G	Q495M9	461 aa		9.82	□□□□□ -0.84
SREK1-215	ENST00000524111	ARGLU1	Q9NWB6	273 aa	Predicted RBP	9.82	□□□□□ -0.84
SREK1-215	ENST00000524111	ZNHIT6	Q9NWK9	470 aa	Known RBP	9.82	□□□□□ -0.84
SREK1-215	ENST00000524111	GUCA1B	Q9UMX6	200 aa		9.82	□□□□□ -0.84
SREK1-215	ENST00000524111	ERICH4	A6NGS2	130 aa		9.82	□□□□□ -0.84
SREK1-215	ENST00000524111	KIF2A	O00139	706 aa	Predicted RBP	9.82	□□□□□ -0.84
SREK1-215	ENST00000524111	ARID5A	Q03989	594 aa		9.82	□□□□□ -0.84
SREK1-215	ENST00000524111	PAK1	Q13153	545 aa		9.82	□□□□□ -0.84
SREK1-215	ENST00000524111	MTF1	Q14872	753 aa		9.82	□□□□□ -0.84
SREK1-215	ENST00000524111	PPP2R5B	Q15173	497 aa		9.82	□□□□□ -0.84
SREK1-215	ENST00000524111	ZNF569	Q5MCW4	686 aa		9.82	□□□□□ -0.84
SREK1-215	ENST00000524111	REXO1	Q8N1G1	1221 aa	Known RBP	9.82	□□□□□ -0.84
SREK1-215	ENST00000524111	CEP95	Q96GE4	821 aa		9.82	□□□□□ -0.84
SREK1-215	ENST00000524111	IRX2	Q9BZI1	471 aa	Predicted RBP	9.82	□□□□□ -0.84
SREK1-215	ENST00000524111	IMPACT	Q9P2X3	320 aa		9.82	□□□□□ -0.84
SREK1-215	ENST00000524111	STK36	Q9NRP7	1315 aa		9.82	□□□□□ -0.84
SREK1-215	ENST00000524111	KRT9	P35527	623 aa		9.82	□□□□□ -0.84
SREK1-215	ENST00000524111	TERF1	P54274	439 aa		9.82	□□□□□ -0.84
SREK1-215	ENST00000524111	NONO	Q15233	471 aa	Known RBP eCLIP	9.82	□□□□□ -0.84
SREK1-215	ENST00000524111	WWC2	Q6AWC2	1192 aa		9.82	□□□□□ -0.84
SREK1-215	ENST00000524111	GJD4	Q96KN9	370 aa	Predicted RBP	9.82	□□□□□ -0.84
SREK1-215	ENST00000524111	HINFP	Q9BQA5	517 aa		9.82	□□□□□ -0.84
SREK1-215	ENST00000524111	SLF1	Q9BQI6	1058 aa		9.82	□□□□□ -0.84
SREK1-215	ENST00000524111	SRRT	Q9BXP5	876 aa	Known RBP	9.82	□□□□□ -0.84
SREK1-215	ENST00000524111	EPC1	Q9H2F5	836 aa		9.82	□□□□□ -0.84
SREK1-215	ENST00000524111	POLD4	Q9HCU8	107 aa		9.82	□□□□□ -0.84
SREK1-215	ENST00000524111	LEMD3	Q9Y2U8	911 aa		9.82	□□□□□ -0.84
SREK1-215	ENST00000524111	SOWAHD	A6NJG2	315 aa		9.81	□□□□□ -0.84
SREK1-215	ENST00000524111	USP17L5	A8MUK1	530 aa		9.81	□□□□□ -0.84
SREK1-215	ENST00000524111	IKBKB	O14920	756 aa		9.81	□□□□□ -0.84
SREK1-215	ENST00000524111	SEMA3E	O15041	775 aa		9.81	□□□□□ -0.84
SREK1-215	ENST00000524111	UBE2S	Q16763	222 aa		9.81	□□□□□ -0.84
SREK1-215	ENST00000524111	TMEM266	Q2M3C6	531 aa		9.81	□□□□□ -0.84
SREK1-215	ENST00000524111	FCHSD1	Q86WN1	690 aa		9.81	□□□□□ -0.84
SREK1-215	ENST00000524111	SPICE1	Q8N0Z3	855 aa		9.81	□□□□□ -0.84
SREK1-215	ENST00000524111	ZNF384	Q8TF68	577 aa		9.81	□□□□□ -0.84
SREK1-215	ENST00000524111	HPS3	Q969F9	1004 aa		9.81	□□□□□ -0.84
SREK1-215	ENST00000524111	GJA10	Q969M2	543 aa		9.81	□□□□□ -0.84
SREK1-215	ENST00000524111	TMEM260	Q9NX78	707 aa		9.81	□□□□□ -0.84
SREK1-215	ENST00000524111	PLCG2	P16885	1265 aa		9.81	□□□□□ -0.84
SREK1-215	ENST00000524111	GNA11	P29992	359 aa		9.81	□□□□□ -0.84
SREK1-215	ENST00000524111	CDC25B	P30305	580 aa		9.81	□□□□□ -0.84
SREK1-215	ENST00000524111	CASP14	P31944	242 aa		9.81	□□□□□ -0.84
SREK1-215	ENST00000524111	VPS72	Q15906	364 aa		9.81	□□□□□ -0.84
SREK1-215	ENST00000524111	PKN1	Q16512	942 aa		9.81	□□□□□ -0.84
SREK1-215	ENST00000524111	C12orf60	Q5U649	245 aa		9.81	□□□□□ -0.84
SREK1-215	ENST00000524111	E4F1	Q66K89	784 aa	Predicted RBP	9.81	□□□□□ -0.84
SREK1-215	ENST00000524111	BARGIN	Q6ZT62	677 aa		9.81	□□□□□ -0.84
SREK1-215	ENST00000524111	CABP7	Q86V35	215 aa		9.81	□□□□□ -0.84
SREK1-215	ENST00000524111	ZFP91	Q96JP5	570 aa	Predicted RBP	9.81	□□□□□ -0.84
SREK1-215	ENST00000524111	ZMYND15	Q9H091	742 aa		9.81	□□□□□ -0.84
SREK1-215	ENST00000524111	MMRN2	Q9H8L6	949 aa		9.81	□□□□□ -0.84
SREK1-215	ENST00000524111	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	9.81	□□□□□ -0.84
SREK1-215	ENST00000524111	CCDC175	P0C221	793 aa		9.81	□□□□□ -0.84
SREK1-215	ENST00000524111	CSGALNACT2	Q8N6G5	542 aa		9.81	□□□□□ -0.84
SREK1-215	ENST00000524111	VEZT	Q9HBM0	779 aa		9.81	□□□□□ -0.84
SREK1-215	ENST00000524111	SLC39A2	Q9NP94	309 aa		9.81	□□□□□ -0.84
SREK1-215	ENST00000524111	PPP2R2C	Q9Y2T4	447 aa		9.81	□□□□□ -0.84
SREK1-215	ENST00000524111	ZNF142	P52746	1687 aa	Predicted RBP	9.8	□□□□□ -0.84
SREK1-215	ENST00000524111	ALS2	Q96Q42	1657 aa		9.8	□□□□□ -0.84
SREK1-215	ENST00000524111		A0A087X0B3	334 aa		9.8	□□□□□ -0.84
SREK1-215	ENST00000524111	ETF1	P62495	437 aa	Known RBP	9.8	□□□□□ -0.84
SREK1-215	ENST00000524111	CACNB1	Q02641	598 aa	Predicted RBP	9.8	□□□□□ -0.84
SREK1-215	ENST00000524111	NCAPH	Q15003	741 aa		9.8	□□□□□ -0.84
SREK1-215	ENST00000524111	TBCK	Q8TEA7	893 aa		9.8	□□□□□ -0.84
SREK1-215	ENST00000524111	PHF20	Q9BVI0	1012 aa		9.8	□□□□□ -0.84
SREK1-215	ENST00000524111	PARP3	Q9Y6F1	533 aa		9.8	□□□□□ -0.84
SREK1-215	ENST00000524111	ARFGEF2	Q9Y6D5	1785 aa		9.8	□□□□□ -0.84
SREK1-215	ENST00000524111	RPN1	P04843	607 aa	Known RBP	9.8	□□□□□ -0.84
SREK1-215	ENST00000524111	MMP10	P09238	476 aa		9.8	□□□□□ -0.84
SREK1-215	ENST00000524111	ATP2B4	P23634	1241 aa		9.8	□□□□□ -0.84
SREK1-215	ENST00000524111	RBL2	Q08999	1139 aa		9.8	□□□□□ -0.84
SREK1-215	ENST00000524111	PFKFB3	Q16875	520 aa	Predicted RBP	9.8	□□□□□ -0.84
SREK1-215	ENST00000524111	TDRD12	Q587J7	1177 aa	Known RBP	9.8	□□□□□ -0.84
SREK1-215	ENST00000524111	RBM26	Q5T8P6	1007 aa	Known RBP	9.8	□□□□□ -0.84
SREK1-215	ENST00000524111	VSTM4	Q8IW00	320 aa		9.8	□□□□□ -0.84
SREK1-215	ENST00000524111	TMEM60	Q9H2L4	133 aa		9.8	□□□□□ -0.84
SREK1-215	ENST00000524111	LRWD1	Q9UFC0	647 aa		9.8	□□□□□ -0.84
SREK1-215	ENST00000524111	ARHGAP6	O43182	974 aa		9.8	□□□□□ -0.84
SREK1-215	ENST00000524111	GDF11	O95390	407 aa		9.8	□□□□□ -0.84
SREK1-215	ENST00000524111	BMP6	P22004	513 aa		9.8	□□□□□ -0.84
SREK1-215	ENST00000524111	NCBP1	Q09161	790 aa	Known RBP	9.8	□□□□□ -0.84
SREK1-215	ENST00000524111	MORC3	Q14149	939 aa		9.8	□□□□□ -0.84
SREK1-215	ENST00000524111	TMCO3	Q6UWJ1	677 aa		9.8	□□□□□ -0.84
SREK1-215	ENST00000524111	TOGARAM2	Q6ZUX3	1019 aa		9.8	□□□□□ -0.84
SREK1-215	ENST00000524111	CAPZA3	Q96KX2	299 aa		9.8	□□□□□ -0.84
SREK1-215	ENST00000524111	CCDC94	Q9BW85	323 aa	Predicted RBP	9.8	□□□□□ -0.84
SREK1-215	ENST00000524111	BMP2K	Q9NSY1	1161 aa	Predicted RBP	9.8	□□□□□ -0.84
SREK1-215	ENST00000524111	RMND1	Q9NWS8	449 aa		9.8	□□□□□ -0.84
SREK1-215	ENST00000524111	PKD2L1	Q9P0L9	805 aa		9.8	□□□□□ -0.84
SREK1-215	ENST00000524111	PCDHA4	Q9UN74	947 aa		9.8	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms