RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 STXBP3O00186 592 aa19.32■□□□□ 0.68
SREK1-212ENST00000522912 TTLL1O95922 423 aa19.32■□□□□ 0.68
SREK1-212ENST00000522912 CALML3P27482 149 aa19.32■□□□□ 0.68
SREK1-212ENST00000522912 SPECC1Q5M775 1068 aa19.32■□□□□ 0.68
SREK1-212ENST00000522912 BLIDQ8IZY5 108 aa19.32■□□□□ 0.68
SREK1-212ENST00000522912 SRPRBQ9Y5M8 271 aaKnown RBP19.32■□□□□ 0.68
SREK1-212ENST00000522912 BRCA1P38398 1863 aaKnown RBP19.32■□□□□ 0.68
SREK1-212ENST00000522912 MPHOSPH10O00566 681 aaKnown RBP19.32■□□□□ 0.68
SREK1-212ENST00000522912 SMARCA1P28370 1054 aa19.32■□□□□ 0.68
SREK1-212ENST00000522912 PIK3AP1Q6ZUJ8 805 aa19.32■□□□□ 0.68
SREK1-212ENST00000522912 HEATR3Q7Z4Q2 680 aa19.32■□□□□ 0.68
SREK1-212ENST00000522912 ZSCAN29Q8IWY8 852 aaPredicted RBP19.32■□□□□ 0.68
SREK1-212ENST00000522912 TRIM44Q96DX7 344 aaPredicted RBP19.32■□□□□ 0.68
SREK1-212ENST00000522912 CCDC17Q96LX7 622 aa19.32■□□□□ 0.68
SREK1-212ENST00000522912 TIGD1Q96MW7 591 aa19.32■□□□□ 0.68
SREK1-212ENST00000522912 BARHL2Q9NY43 387 aa19.32■□□□□ 0.68
SREK1-212ENST00000522912 NOL7Q9UMY1 257 aaKnown RBP19.32■□□□□ 0.68
SREK1-212ENST00000522912 PCDHA4Q9UN74 947 aa19.32■□□□□ 0.68
SREK1-212ENST00000522912 MORC2Q9Y6X9 1032 aaPredicted RBP19.32■□□□□ 0.68
SREK1-212ENST00000522912 A0A087WWV3 80 aa19.31■□□□□ 0.68
SREK1-212ENST00000522912 SNHG28P0DPA3 235 aa19.31■□□□□ 0.68
SREK1-212ENST00000522912 SHROOM1Q2M3G4 852 aaPredicted RBP19.31■□□□□ 0.68
SREK1-212ENST00000522912 LUZP1Q86V48 1076 aa19.31■□□□□ 0.68
SREK1-212ENST00000522912 VPS33BQ9H267 617 aa19.31■□□□□ 0.68
SREK1-212ENST00000522912 FRMPD2Q68DX3 1309 aaPredicted RBP19.31■□□□□ 0.68
SREK1-212ENST00000522912 M0R2N6 131 aa19.3■□□□□ 0.68
SREK1-212ENST00000522912 AP5Z1O43299 807 aa19.3■□□□□ 0.68
SREK1-212ENST00000522912 ZNF174Q15697 407 aa19.3■□□□□ 0.68
SREK1-212ENST00000522912 TTC38Q5R3I4 469 aa19.3■□□□□ 0.68
SREK1-212ENST00000522912 UBA5Q9GZZ9 404 aa19.3■□□□□ 0.68
SREK1-212ENST00000522912 MTFR1LQ9H019 292 aa19.3■□□□□ 0.68
SREK1-212ENST00000522912 KIAA1468Q9P260 1216 aa19.3■□□□□ 0.68
SREK1-212ENST00000522912 ZBTB12Q9Y330 459 aaPredicted RBP19.3■□□□□ 0.68
SREK1-212ENST00000522912 FER1L6Q2WGJ9 1857 aa19.3■□□□□ 0.68
SREK1-212ENST00000522912 ENTPD3O75355 529 aa19.3■□□□□ 0.68
SREK1-212ENST00000522912 STX1AQ16623 288 aa19.3■□□□□ 0.68
SREK1-212ENST00000522912 SOGA3Q5TF21 947 aa19.3■□□□□ 0.68
SREK1-212ENST00000522912 C11orf57Q6ZUT1 292 aaPredicted RBP19.3■□□□□ 0.68
SREK1-212ENST00000522912 ZNF579Q8NAF0 562 aaKnown RBP19.3■□□□□ 0.68
SREK1-212ENST00000522912 RIOX1Q9H6W3 641 aa19.3■□□□□ 0.68
SREK1-212ENST00000522912 VAT1LQ9HCJ6 419 aa19.3■□□□□ 0.68
SREK1-212ENST00000522912 KCNH3Q9ULD8 1083 aa19.3■□□□□ 0.68
SREK1-212ENST00000522912 ATRNL1Q5VV63 1379 aa19.3■□□□□ 0.68
SREK1-212ENST00000522912 POLD1P28340 1107 aa19.29■□□□□ 0.68
SREK1-212ENST00000522912 ZNF165P49910 485 aa19.29■□□□□ 0.68
SREK1-212ENST00000522912 CERKLQ49MI3 558 aaPredicted RBP19.29■□□□□ 0.68
SREK1-212ENST00000522912 TATDN1Q6P1N9 297 aa19.29■□□□□ 0.68
SREK1-212ENST00000522912 METTL16Q86W50 562 aaKnown RBP19.29■□□□□ 0.68
SREK1-212ENST00000522912 FOXP4Q8IVH2 680 aaPredicted RBP19.29■□□□□ 0.68
SREK1-212ENST00000522912 DAGLBQ8NCG7 672 aa19.29■□□□□ 0.68
SREK1-212ENST00000522912 CCDC148Q8NFR7 591 aa19.29■□□□□ 0.68
SREK1-212ENST00000522912 RASGRP4Q8TDF6 673 aa19.29■□□□□ 0.68
SREK1-212ENST00000522912 RRP36Q96EU6 259 aaKnown RBP19.29■□□□□ 0.68
SREK1-212ENST00000522912 PIGSQ96S52 555 aa19.29■□□□□ 0.68
SREK1-212ENST00000522912 ZNRF3Q9ULT6 936 aa19.29■□□□□ 0.68
SREK1-212ENST00000522912 SPDYE2BA6NHP3 402 aa19.29■□□□□ 0.68
SREK1-212ENST00000522912 ADCY5O95622 1261 aa19.29■□□□□ 0.68
SREK1-212ENST00000522912 SPDYE6P0CI01 402 aa19.29■□□□□ 0.68
SREK1-212ENST00000522912 TRAPPC10P48553 1259 aa19.29■□□□□ 0.68
SREK1-212ENST00000522912 ASPRV1Q53RT3 343 aa19.29■□□□□ 0.68
SREK1-212ENST00000522912 HOMER1Q86YM7 354 aa19.29■□□□□ 0.68
SREK1-212ENST00000522912 ATP2B2Q01814 1243 aa19.28■□□□□ 0.68
SREK1-212ENST00000522912 LONRF3Q496Y0 759 aa19.28■□□□□ 0.68
SREK1-212ENST00000522912 DALRD3Q5D0E6 543 aaKnown RBP19.28■□□□□ 0.68
SREK1-212ENST00000522912 NIM1KQ8IY84 436 aa19.28■□□□□ 0.68
SREK1-212ENST00000522912 CSRNP2Q9H175 543 aa19.28■□□□□ 0.68
SREK1-212ENST00000522912 PCDHA6Q9UN73 950 aa19.28■□□□□ 0.68
SREK1-212ENST00000522912 PCDHA8Q9Y5H6 950 aa19.28■□□□□ 0.68
SREK1-212ENST00000522912 CAVIN2O95810 425 aa19.27■□□□□ 0.68
SREK1-212ENST00000522912 BMP15O95972 392 aa19.27■□□□□ 0.68
SREK1-212ENST00000522912 ZNF543Q08ER8 600 aa19.27■□□□□ 0.68
SREK1-212ENST00000522912 GALNT17Q6IS24 598 aa19.27■□□□□ 0.68
SREK1-212ENST00000522912 USP49Q70CQ1 688 aa19.27■□□□□ 0.68
SREK1-212ENST00000522912 FAM177A1Q8N128 213 aaPredicted RBP19.27■□□□□ 0.68
SREK1-212ENST00000522912 GPCPD1Q9NPB8 672 aa19.27■□□□□ 0.68
SREK1-212ENST00000522912 ANO10Q9NW15 660 aa19.27■□□□□ 0.68
SREK1-212ENST00000522912 COL2A1P02458 1487 aaPredicted RBP19.27■□□□□ 0.68
SREK1-212ENST00000522912 IQCB1Q15051 598 aa19.27■□□□□ 0.67
SREK1-212ENST00000522912 TRIM34Q9BYJ4 488 aa19.27■□□□□ 0.67
SREK1-212ENST00000522912 ZMYND12Q9H0C1 365 aa19.27■□□□□ 0.67
SREK1-212ENST00000522912 FAM13BQ9NYF5 915 aa19.27■□□□□ 0.67
SREK1-212ENST00000522912 HDAC9Q9UKV0 1011 aa19.27■□□□□ 0.67
SREK1-212ENST00000522912 CLRN2A0PK11 232 aa19.26■□□□□ 0.67
SREK1-212ENST00000522912 TCP10L2B9ZVM9 353 aa19.26■□□□□ 0.67
SREK1-212ENST00000522912 NAPAP54920 295 aa19.26■□□□□ 0.67
SREK1-212ENST00000522912 ATP2C1P98194 919 aaPredicted RBP19.26■□□□□ 0.67
SREK1-212ENST00000522912 PTGDRQ13258 359 aa19.26■□□□□ 0.67
SREK1-212ENST00000522912 R3HDM1Q15032 1099 aaKnown RBP19.26■□□□□ 0.67
SREK1-212ENST00000522912 DLGAP5Q15398 846 aa19.26■□□□□ 0.67
SREK1-212ENST00000522912 KRBA2Q6ZNG9 492 aa19.26■□□□□ 0.67
SREK1-212ENST00000522912 ZNF70Q9UC06 446 aaPredicted RBP19.26■□□□□ 0.67
SREK1-212ENST00000522912 SEC63Q9UGP8 760 aaKnown RBP19.26■□□□□ 0.67
SREK1-212ENST00000522912 EEF2P13639 858 aaKnown RBP19.25■□□□□ 0.67
SREK1-212ENST00000522912 CXCL9Q07325 125 aa19.25■□□□□ 0.67
SREK1-212ENST00000522912 TTBK2Q6IQ55 1244 aa19.25■□□□□ 0.67
SREK1-212ENST00000522912 SIAH1Q8IUQ4 282 aa19.25■□□□□ 0.67
SREK1-212ENST00000522912 FAM43AQ8N2R8 423 aa19.25■□□□□ 0.67
SREK1-212ENST00000522912 MKL1Q969V6 931 aa19.25■□□□□ 0.67
SREK1-212ENST00000522912 RRAGDQ9NQL2 400 aaPredicted RBP19.25■□□□□ 0.67
SREK1-212ENST00000522912 PPP1R1BQ9UD71 204 aaPredicted RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms