RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 GPATCH2Q9NW75 528 aa7.17□□□□□ -1.26
HMGB1P1-201ENST00000522557 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P1-201ENST00000522557 DNAJC25-GNG10A0A024R161 153 aa7.16□□□□□ -1.26
HMGB1P1-201ENST00000522557 SHISA3A0PJX4 238 aa7.16□□□□□ -1.26
HMGB1P1-201ENST00000522557 MEIS3P2A8K0S8 358 aa7.16□□□□□ -1.26
HMGB1P1-201ENST00000522557 SMARCA5O60264 1052 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P1-201ENST00000522557 TXKP42681 527 aa7.16□□□□□ -1.26
HMGB1P1-201ENST00000522557 RAB33AQ14088 237 aa7.16□□□□□ -1.26
HMGB1P1-201ENST00000522557 RASA3Q14644 834 aa7.16□□□□□ -1.26
HMGB1P1-201ENST00000522557 NLRC3Q7RTR2 1065 aa7.16□□□□□ -1.26
HMGB1P1-201ENST00000522557 TSPYL5Q86VY4 417 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P1-201ENST00000522557 FLAD1Q8NFF5 587 aa7.16□□□□□ -1.26
HMGB1P1-201ENST00000522557 FAM168AQ92567 244 aa7.16□□□□□ -1.26
HMGB1P1-201ENST00000522557 ASPNQ9BXN1 380 aa7.16□□□□□ -1.26
HMGB1P1-201ENST00000522557 SLAMF8Q9P0V8 285 aa7.16□□□□□ -1.26
HMGB1P1-201ENST00000522557 PPT2Q9UMR5 302 aa7.16□□□□□ -1.26
HMGB1P1-201ENST00000522557 NME1P15531 152 aaKnown RBP7.15□□□□□ -1.26
HMGB1P1-201ENST00000522557 CHMP4BP1P59074 171 aa7.15□□□□□ -1.26
HMGB1P1-201ENST00000522557 RALGPS1Q5JS13 557 aa7.15□□□□□ -1.26
HMGB1P1-201ENST00000522557 NBPF12Q5TAG4 269 aaPredicted RBP7.15□□□□□ -1.26
HMGB1P1-201ENST00000522557 TMEM40Q8WWA1 233 aa7.15□□□□□ -1.26
HMGB1P1-201ENST00000522557 ALPK1Q96QP1 1244 aa7.15□□□□□ -1.26
HMGB1P1-201ENST00000522557 ADAMTS10Q9H324 1103 aa7.15□□□□□ -1.26
HMGB1P1-201ENST00000522557 DUSP13Q9UII6 198 aa7.15□□□□□ -1.26
HMGB1P1-201ENST00000522557 GDNFP39905 211 aa7.14□□□□□ -1.27
HMGB1P1-201ENST00000522557 EGR3Q06889 387 aa7.14□□□□□ -1.27
HMGB1P1-201ENST00000522557 LRRFIP1Q32MZ4 808 aaKnown RBP7.14□□□□□ -1.27
HMGB1P1-201ENST00000522557 OGFOD2Q6N063 350 aa7.14□□□□□ -1.27
HMGB1P1-201ENST00000522557 TTC6Q86TZ1 520 aa7.14□□□□□ -1.27
HMGB1P1-201ENST00000522557 JAZF1Q86VZ6 243 aa7.14□□□□□ -1.27
HMGB1P1-201ENST00000522557 CKAP2LQ8IYA6 745 aa7.14□□□□□ -1.27
HMGB1P1-201ENST00000522557 ZNF512BQ96KM6 892 aaPredicted RBP7.14□□□□□ -1.27
HMGB1P1-201ENST00000522557 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.14□□□□□ -1.27
HMGB1P1-201ENST00000522557 TLDC2A0PJX2 215 aa7.13□□□□□ -1.27
HMGB1P1-201ENST00000522557 SSBP05455 408 aaKnown RBP eCLIP7.13□□□□□ -1.27
HMGB1P1-201ENST00000522557 CANXP27824 592 aaKnown RBP7.13□□□□□ -1.27
HMGB1P1-201ENST00000522557 AFMP43652 599 aa7.13□□□□□ -1.27
HMGB1P1-201ENST00000522557 ERVFC1P60507 584 aa7.13□□□□□ -1.27
HMGB1P1-201ENST00000522557 CCDC81Q6ZN84 652 aa7.13□□□□□ -1.27
HMGB1P1-201ENST00000522557 ANKS3Q6ZW76 656 aa7.13□□□□□ -1.27
HMGB1P1-201ENST00000522557 LSRQ86X29 649 aaPredicted RBP7.13□□□□□ -1.27
HMGB1P1-201ENST00000522557 TMEM192Q8IY95 271 aa7.13□□□□□ -1.27
HMGB1P1-201ENST00000522557 PMFBP1Q8TBY8 1022 aa7.13□□□□□ -1.27
HMGB1P1-201ENST00000522557 SLC9A7Q96T83 725 aa7.13□□□□□ -1.27
HMGB1P1-201ENST00000522557 KRTAP4-12Q9BQ66 201 aa7.13□□□□□ -1.27
HMGB1P1-201ENST00000522557 CDK11AQ9UQ88 783 aaPredicted RBP7.13□□□□□ -1.27
HMGB1P1-201ENST00000522557 PCDHA11Q9Y5I1 949 aa7.13□□□□□ -1.27
HMGB1P1-201ENST00000522557 FAM86C2PA6NEL3 165 aa7.12□□□□□ -1.27
HMGB1P1-201ENST00000522557 ACRP10323 421 aa7.12□□□□□ -1.27
HMGB1P1-201ENST00000522557 HK2P52789 917 aa7.12□□□□□ -1.27
HMGB1P1-201ENST00000522557 CASP7P55210 303 aa7.12□□□□□ -1.27
HMGB1P1-201ENST00000522557 SNW1Q13573 536 aaKnown RBP7.12□□□□□ -1.27
HMGB1P1-201ENST00000522557 CLEC16AQ2KHT3 1053 aa7.12□□□□□ -1.27
HMGB1P1-201ENST00000522557 NBPF9Q3BBW0 867 aa7.12□□□□□ -1.27
HMGB1P1-201ENST00000522557 LRP10Q7Z4F1 713 aa7.12□□□□□ -1.27
HMGB1P1-201ENST00000522557 TMC3Q7Z5M5 1100 aa7.12□□□□□ -1.27
HMGB1P1-201ENST00000522557 ZSWIM9Q86XI8 627 aa7.12□□□□□ -1.27
HMGB1P1-201ENST00000522557 C19orf47Q8N9M1 422 aaKnown RBP7.12□□□□□ -1.27
HMGB1P1-201ENST00000522557 OR6P1Q8NGX9 317 aa7.12□□□□□ -1.27
HMGB1P1-201ENST00000522557 HNRNPLLQ8WVV9 542 aaKnown RBP7.12□□□□□ -1.27
HMGB1P1-201ENST00000522557 SIRPGQ9P1W8 387 aa7.12□□□□□ -1.27
HMGB1P1-201ENST00000522557 MRVI1Q9Y6F6 885 aa7.12□□□□□ -1.27
HMGB1P1-201ENST00000522557 ZNF503-AS2A6NEH8 195 aa7.11□□□□□ -1.27
HMGB1P1-201ENST00000522557 TNFRSF10CO14798 259 aa7.11□□□□□ -1.27
HMGB1P1-201ENST00000522557 SMAD7O15105 426 aaKnown RBP7.11□□□□□ -1.27
HMGB1P1-201ENST00000522557 CLEC3AO75596 197 aa7.11□□□□□ -1.27
HMGB1P1-201ENST00000522557 IMPDH2P12268 514 aa7.11□□□□□ -1.27
HMGB1P1-201ENST00000522557 LTKP29376 864 aa7.11□□□□□ -1.27
HMGB1P1-201ENST00000522557 RNF4P78317 190 aa7.11□□□□□ -1.27
HMGB1P1-201ENST00000522557 NMIQ13287 307 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P1-201ENST00000522557 KCNMB1Q16558 191 aa7.11□□□□□ -1.27
HMGB1P1-201ENST00000522557 FBXW10Q5XX13 1052 aa7.11□□□□□ -1.27
HMGB1P1-201ENST00000522557 TAB3Q8N5C8 712 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P1-201ENST00000522557 KIRREL1Q96J84 757 aa7.11□□□□□ -1.27
HMGB1P1-201ENST00000522557 FERD3LQ96RJ6 166 aa7.11□□□□□ -1.27
HMGB1P1-201ENST00000522557 ZSWIM4Q9H7M6 989 aa7.11□□□□□ -1.27
HMGB1P1-201ENST00000522557 TMEM59LQ9UK28 342 aa7.11□□□□□ -1.27
HMGB1P1-201ENST00000522557 CCNFP41002 786 aa7.1□□□□□ -1.27
HMGB1P1-201ENST00000522557 TNNI3KQ59H18 835 aa7.1□□□□□ -1.27
HMGB1P1-201ENST00000522557 RUFY4Q6ZNE9 571 aa7.1□□□□□ -1.27
HMGB1P1-201ENST00000522557 USHBP1Q8N6Y0 703 aa7.1□□□□□ -1.27
HMGB1P1-201ENST00000522557 CELF2-AS1Q8N7Q2 184 aa7.1□□□□□ -1.27
HMGB1P1-201ENST00000522557 SLC6A18Q96N87 628 aa7.1□□□□□ -1.27
HMGB1P1-201ENST00000522557 PRDM14Q9GZV8 571 aa7.1□□□□□ -1.27
HMGB1P1-201ENST00000522557 ASCC2Q9H1I8 757 aaPredicted RBP7.1□□□□□ -1.27
HMGB1P1-201ENST00000522557 GOLGA2P5Q9HBQ8 144 aa7.1□□□□□ -1.27
HMGB1P1-201ENST00000522557 SNTG2Q9NY99 539 aa7.1□□□□□ -1.27
HMGB1P1-201ENST00000522557 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.1□□□□□ -1.27
HMGB1P1-201ENST00000522557 MINPP1Q9UNW1 487 aa7.1□□□□□ -1.27
HMGB1P1-201ENST00000522557 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.09□□□□□ -1.27
HMGB1P1-201ENST00000522557 EIF6P56537 245 aaKnown RBP7.09□□□□□ -1.27
HMGB1P1-201ENST00000522557 TEKQ02763 1124 aa7.09□□□□□ -1.27
HMGB1P1-201ENST00000522557 NFE2L2Q16236 605 aa7.09□□□□□ -1.27
HMGB1P1-201ENST00000522557 INTS3Q68E01 1043 aaKnown RBP7.09□□□□□ -1.27
HMGB1P1-201ENST00000522557 KRTAP19-1Q8IUB9 90 aa7.09□□□□□ -1.27
HMGB1P1-201ENST00000522557 ENOX1Q8TC92 643 aaKnown RBP7.09□□□□□ -1.27
HMGB1P1-201ENST00000522557 LIN37Q96GY3 246 aaPredicted RBP7.09□□□□□ -1.27
HMGB1P1-201ENST00000522557 CCDC120Q96HB5 630 aa7.09□□□□□ -1.27
HMGB1P1-201ENST00000522557 PUS7Q96PZ0 661 aaKnown RBP7.09□□□□□ -1.27
HMGB1P1-201ENST00000522557 HDAC8Q9BY41 377 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms