RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 IARSP41252 1262 aaKnown RBP4.92□□□□□ -1.62
SKP1-209ENST00000522552 TYRO3Q06418 890 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 GTF2H3Q13889 308 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 CCDC96Q2M329 555 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 ZKSCAN2Q63HK3 967 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 DIEXFQ68CQ4 756 aaKnown RBP4.92□□□□□ -1.62
SKP1-209ENST00000522552 BICDL1Q6ZP65 573 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 Q6ZVU0 165 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 BRAPQ7Z569 592 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 FGD2Q7Z6J4 655 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 SLC7A14Q8TBB6 771 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 AARSD1Q9BTE6 412 aaKnown RBP4.92□□□□□ -1.62
SKP1-209ENST00000522552 MENTQ9BUN1 341 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 SLC13A1Q9BZW2 595 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 SLC12A5Q9H2X9 1139 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 ZNF576Q9H609 170 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 IFT122Q9HBG6 1241 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 SENP2Q9HC62 589 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 TMEM39AQ9NV64 488 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 CYP8B1Q9UNU6 501 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 APOBEC2Q9Y235 224 aaKnown RBP4.92□□□□□ -1.62
SKP1-209ENST00000522552 PCDHGB3Q9Y5G1 929 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 A0A087WZG4 1122 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 F5H423 210 aaPredicted RBP4.92□□□□□ -1.62
SKP1-209ENST00000522552 hCG_1984214I3L0E3 225 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 HIP1RO75146 1068 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 TRPA1O75762 1119 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 JMJD7P0C870 316 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 TATP17735 454 aaPredicted RBP4.92□□□□□ -1.62
SKP1-209ENST00000522552 TNFAIP3P21580 790 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 PTGIRP43119 386 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 ZNF157P51786 506 aaPredicted RBP4.92□□□□□ -1.62
SKP1-209ENST00000522552 SUMO1P63165 101 aaKnown RBP4.92□□□□□ -1.62
SKP1-209ENST00000522552 ADCY1Q08828 1119 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 DDX10Q13206 875 aaKnown RBP4.92□□□□□ -1.62
SKP1-209ENST00000522552 CNGB1Q14028 1251 aaPredicted RBP4.92□□□□□ -1.62
SKP1-209ENST00000522552 HSP90AA2PQ14568 343 aaPredicted RBP4.92□□□□□ -1.62
SKP1-209ENST00000522552 ELF2Q15723 593 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 SV2CQ496J9 727 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 RPS26P11Q5JNZ5 115 aaPredicted RBP4.92□□□□□ -1.62
SKP1-209ENST00000522552 GNASQ5JWF2 1037 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 PPP4R3AQ6IN85 833 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 GET4Q7L5D6 327 aaPredicted RBP4.92□□□□□ -1.62
SKP1-209ENST00000522552 FCHSD1Q86WN1 690 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 CREBRFQ8IUR6 639 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 FAM186BQ8IYM0 893 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 TTC30BQ8N4P2 665 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 OR13H1Q8NG92 308 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 POF1BQ8WVV4 589 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 INSM2Q96T92 566 aaPredicted RBP4.92□□□□□ -1.62
SKP1-209ENST00000522552 TSEN34Q9BSV6 310 aaKnown RBP4.92□□□□□ -1.62
SKP1-209ENST00000522552 GSX2Q9BZM3 304 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 EFCC1Q9HA90 598 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 SLC52A2Q9HAB3 445 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 LGR6Q9HBX8 967 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 PGAP2Q9UHJ9 254 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 NOL7Q9UMY1 257 aaKnown RBP4.92□□□□□ -1.62
SKP1-209ENST00000522552 CTDP1Q9Y5B0 961 aaPredicted RBP4.92□□□□□ -1.62
SKP1-209ENST00000522552 FAM86C2PA6NEL3 165 aa4.91□□□□□ -1.62
SKP1-209ENST00000522552 FIGNL2A6NMB9 653 aa4.91□□□□□ -1.62
SKP1-209ENST00000522552 M0R2C6 588 aa4.91□□□□□ -1.62
SKP1-209ENST00000522552 FZD9O00144 591 aa4.91□□□□□ -1.62
SKP1-209ENST00000522552 MAP3K6O95382 1288 aa4.91□□□□□ -1.62
SKP1-209ENST00000522552 MT-CO1P00395 513 aa4.91□□□□□ -1.62
SKP1-209ENST00000522552 DDIT3P35638 169 aa4.91□□□□□ -1.62
SKP1-209ENST00000522552 PPP2R2AP63151 447 aa4.91□□□□□ -1.62
SKP1-209ENST00000522552 SLC7A5Q01650 507 aa4.91□□□□□ -1.62
SKP1-209ENST00000522552 PTPN11Q06124 597 aaPredicted RBP4.91□□□□□ -1.62
SKP1-209ENST00000522552 SKOR2Q2VWA4 1001 aaPredicted RBP4.91□□□□□ -1.62
SKP1-209ENST00000522552 INAVAQ3KP66 663 aa4.91□□□□□ -1.62
SKP1-209ENST00000522552 TUBB8Q3ZCM7 444 aa4.91□□□□□ -1.62
SKP1-209ENST00000522552 TMEM240Q5SV17 173 aa4.91□□□□□ -1.62
SKP1-209ENST00000522552 DACT2Q5SW24 774 aa4.91□□□□□ -1.62
SKP1-209ENST00000522552 C1QTNF12Q5T7M4 302 aa4.91□□□□□ -1.62
SKP1-209ENST00000522552 LCE3BQ5TA77 95 aa4.91□□□□□ -1.62
SKP1-209ENST00000522552 MZT2AQ6P582 158 aa4.91□□□□□ -1.62
SKP1-209ENST00000522552 PDXDC1Q6P996 788 aa4.91□□□□□ -1.62
SKP1-209ENST00000522552 MAATS1Q7Z4T9 603 aa4.91□□□□□ -1.62
SKP1-209ENST00000522552 NAA15Q9BXJ9 866 aaKnown RBP4.91□□□□□ -1.62
SKP1-209ENST00000522552 CSRNP2Q9H175 543 aa4.91□□□□□ -1.62
SKP1-209ENST00000522552 FNIP2Q9P278 1114 aa4.91□□□□□ -1.62
SKP1-209ENST00000522552 NDOR1Q9UHB4 597 aa4.91□□□□□ -1.62
SKP1-209ENST00000522552 GIT1Q9Y2X7 761 aa4.91□□□□□ -1.62
SKP1-209ENST00000522552 SAMM50Q9Y512 469 aa4.91□□□□□ -1.62
SKP1-209ENST00000522552 A0A096LPE4 126 aa4.9□□□□□ -1.62
SKP1-209ENST00000522552 KRTAP4-8A0A0G2JLE6 195 aa4.9□□□□□ -1.62
SKP1-209ENST00000522552 A0A1W2PPZ6 126 aa4.9□□□□□ -1.62
SKP1-209ENST00000522552 K7ESF4 209 aa4.9□□□□□ -1.62
SKP1-209ENST00000522552 FIBPO43427 364 aa4.9□□□□□ -1.62
SKP1-209ENST00000522552 MAN1A2O60476 641 aa4.9□□□□□ -1.62
SKP1-209ENST00000522552 SNX2O60749 519 aa4.9□□□□□ -1.62
SKP1-209ENST00000522552 MMP20O60882 483 aa4.9□□□□□ -1.62
SKP1-209ENST00000522552 HTR3BO95264 441 aa4.9□□□□□ -1.62
SKP1-209ENST00000522552 LTFP02788 710 aa4.9□□□□□ -1.62
SKP1-209ENST00000522552 ASLP04424 464 aa4.9□□□□□ -1.62
SKP1-209ENST00000522552 NEFMP07197 916 aa4.9□□□□□ -1.62
SKP1-209ENST00000522552 C6orf222P0C671 652 aaPredicted RBP4.9□□□□□ -1.62
SKP1-209ENST00000522552 RBP3P10745 1247 aa4.9□□□□□ -1.62
SKP1-209ENST00000522552 ATP4AP20648 1035 aa4.9□□□□□ -1.62
SKP1-209ENST00000522552 CTSOP43234 321 aaPredicted RBP4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms