RNA–Protein interactions for RNA: ENST00000519295.5

AP3B1-204, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene AP3B1, Length 3,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-204ENST00000519295 ARHGAP45Q92619 1136 aa6.1□□□□□ -1.43
AP3B1-204ENST00000519295 DDX21Q9NR30 783 aaKnown RBP eCLIP6.1□□□□□ -1.43
AP3B1-204ENST00000519295 CALCOCO1Q9P1Z2 691 aa6.1□□□□□ -1.43
AP3B1-204ENST00000519295 TFIP11Q9UBB9 837 aaKnown RBP6.1□□□□□ -1.43
AP3B1-204ENST00000519295 ATP6V0A2Q9Y487 856 aa6.1□□□□□ -1.43
AP3B1-204ENST00000519295 HOXA2O43364 376 aa6.09□□□□□ -1.43
AP3B1-204ENST00000519295 OLFM2O95897 454 aa6.09□□□□□ -1.43
AP3B1-204ENST00000519295 POLD2P49005 469 aa6.09□□□□□ -1.43
AP3B1-204ENST00000519295 ZNF280AP59817 542 aaPredicted RBP6.09□□□□□ -1.43
AP3B1-204ENST00000519295 ZNF746Q6NUN9 644 aaPredicted RBP6.09□□□□□ -1.43
AP3B1-204ENST00000519295 MTMR14Q8NCE2 650 aa6.09□□□□□ -1.43
AP3B1-204ENST00000519295 DDX54Q8TDD1 881 aaKnown RBP6.09□□□□□ -1.43
AP3B1-204ENST00000519295 IQCGQ9H095 443 aaKnown RBP6.09□□□□□ -1.43
AP3B1-204ENST00000519295 ZNF652Q9Y2D9 606 aa6.09□□□□□ -1.43
AP3B1-204ENST00000519295 MAP3K15Q6ZN16 1313 aa6.09□□□□□ -1.43
AP3B1-204ENST00000519295 NBPF26B4DH59 902 aa6.09□□□□□ -1.43
AP3B1-204ENST00000519295 SERPINB2P05120 415 aa6.09□□□□□ -1.43
AP3B1-204ENST00000519295 TCF7P36402 384 aaPredicted RBP6.09□□□□□ -1.43
AP3B1-204ENST00000519295 RCAN1P53805 252 aa6.09□□□□□ -1.43
AP3B1-204ENST00000519295 PLOD1Q02809 727 aaPredicted RBP6.09□□□□□ -1.43
AP3B1-204ENST00000519295 ARHGEF6Q15052 776 aa6.09□□□□□ -1.43
AP3B1-204ENST00000519295 WWC2Q6AWC2 1192 aa6.09□□□□□ -1.43
AP3B1-204ENST00000519295 SPATA21Q7Z572 469 aa6.09□□□□□ -1.43
AP3B1-204ENST00000519295 UBE2Q1Q7Z7E8 422 aa6.09□□□□□ -1.43
AP3B1-204ENST00000519295 LRRC49Q8IUZ0 686 aa6.09□□□□□ -1.43
AP3B1-204ENST00000519295 CEP95Q96GE4 821 aa6.09□□□□□ -1.43
AP3B1-204ENST00000519295 PLA2G12BQ9BX93 195 aa6.09□□□□□ -1.43
AP3B1-204ENST00000519295 XPO4Q9C0E2 1151 aaKnown RBP6.09□□□□□ -1.43
AP3B1-204ENST00000519295 PCDHGC5Q9Y5F6 944 aa6.09□□□□□ -1.43
AP3B1-204ENST00000519295 SHTN1A0MZ66 631 aa6.09□□□□□ -1.43
AP3B1-204ENST00000519295 ZNF254O75437 659 aa6.09□□□□□ -1.43
AP3B1-204ENST00000519295 HSPA8P11142 646 aaKnown RBP6.09□□□□□ -1.43
AP3B1-204ENST00000519295 VEGFAP15692 232 aaPredicted RBP6.09□□□□□ -1.43
AP3B1-204ENST00000519295 PIK3CAP42336 1068 aa6.09□□□□□ -1.43
AP3B1-204ENST00000519295 EIF2B5Q13144 721 aaKnown RBP6.09□□□□□ -1.43
AP3B1-204ENST00000519295 SF3B3Q15393 1217 aaKnown RBP6.09□□□□□ -1.43
AP3B1-204ENST00000519295 C11orf74Q86VG3 221 aa6.09□□□□□ -1.43
AP3B1-204ENST00000519295 REXO1L1PQ8IX06 675 aa6.09□□□□□ -1.43
AP3B1-204ENST00000519295 USHBP1Q8N6Y0 703 aa6.09□□□□□ -1.43
AP3B1-204ENST00000519295 FAM81BQ96LP2 452 aa6.09□□□□□ -1.43
AP3B1-204ENST00000519295 GSDMAQ96QA5 445 aa6.09□□□□□ -1.43
AP3B1-204ENST00000519295 RASSF4Q9H2L5 321 aa6.09□□□□□ -1.43
AP3B1-204ENST00000519295 SPTLC3Q9NUV7 552 aa6.09□□□□□ -1.43
AP3B1-204ENST00000519295 TUBGCP4Q9UGJ1 667 aa6.09□□□□□ -1.43
AP3B1-204ENST00000519295 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.09□□□□□ -1.43
AP3B1-204ENST00000519295 LOC105371267A0A1B0GV96 52 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 ENO4A6NNW6 628 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 STXBP3O00186 592 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 MYO1BO43795 1136 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 KCNJ13O60928 360 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 GNALP38405 381 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 CABP4P57796 275 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 RAC1P63000 192 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 RASA2Q15283 850 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 WLSQ5T9L3 541 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 TBC1D9BQ66K14 1250 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 PHLDB3Q6NSJ2 640 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 ZNF530Q6P9A1 599 aaPredicted RBP6.08□□□□□ -1.44
AP3B1-204ENST00000519295 AADATQ8N5Z0 425 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 PARD3BQ8TEW8 1205 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 CAPS2Q9BXY5 557 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 TAF1DQ9H5J8 278 aaPredicted RBP6.08□□□□□ -1.44
AP3B1-204ENST00000519295 PCDH12Q9NPG4 1184 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 AGO2Q9UKV8 859 aaKnown RBP6.08□□□□□ -1.44
AP3B1-204ENST00000519295 ZBTB1Q9Y2K1 713 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 IQCA1LA6NCM1 817 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 RNF113AO15541 343 aaKnown RBP6.08□□□□□ -1.44
AP3B1-204ENST00000519295 APBB3O95704 486 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 SLC4A2P04920 1241 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 PDGFRBP09619 1106 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 GJA8P48165 433 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 NAP1L1P55209 391 aaKnown RBP6.08□□□□□ -1.44
AP3B1-204ENST00000519295 FMR1Q06787 632 aaKnown RBP eCLIP6.08□□□□□ -1.44
AP3B1-204ENST00000519295 BEND6Q5SZJ8 279 aaPredicted RBP6.08□□□□□ -1.44
AP3B1-204ENST00000519295 FAAH2Q6GMR7 532 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 CCDC73Q6ZRK6 1079 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 PNMA8AQ86V59 439 aaPredicted RBP6.08□□□□□ -1.44
AP3B1-204ENST00000519295 RUNDC1Q96C34 613 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 SLC39A3Q9BRY0 314 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 TACO1Q9BSH4 297 aaKnown RBP6.08□□□□□ -1.44
AP3B1-204ENST00000519295 EPB41L4AQ9HCS5 686 aaPredicted RBP6.08□□□□□ -1.44
AP3B1-204ENST00000519295 SFMBT1Q9UHJ3 866 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 SENP3-EIF4A1A0A087X0R7 540 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 ERICH4A6NGS2 130 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 EIF4A1P60842 406 aaKnown RBP6.08□□□□□ -1.44
AP3B1-204ENST00000519295 FLIIQ13045 1269 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 ERAP2Q6P179 960 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 SYT10Q6XYQ8 523 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 ARL6IP6Q8N6S5 226 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 ERMNQ8TAM6 284 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 DPF2Q92785 391 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 SDCCAG3Q96C92 435 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 UPF2Q9HAU5 1272 aaKnown RBP6.08□□□□□ -1.44
AP3B1-204ENST00000519295 TPCN1Q9ULQ1 816 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 PPP2R3BQ9Y5P8 575 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 KIF5CO60282 957 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 MTRF1O75570 445 aaKnown RBP6.08□□□□□ -1.44
AP3B1-204ENST00000519295 RPS12P25398 132 aaKnown RBP6.08□□□□□ -1.44
AP3B1-204ENST00000519295 MTHFSP49914 203 aa6.08□□□□□ -1.44
AP3B1-204ENST00000519295 FKBP1BP68106 108 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms