RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 PSMD14O00487 310 aa20.89■□□□□ 0.93
SDC2-202ENST00000518385 PRDM1O75626 825 aa20.89■□□□□ 0.93
SDC2-202ENST00000518385 POLR3DP05423 398 aaPredicted RBP20.89■□□□□ 0.93
SDC2-202ENST00000518385 CRKP46108 304 aa20.89■□□□□ 0.93
SDC2-202ENST00000518385 SF3A1Q15459 793 aaKnown RBP20.89■□□□□ 0.93
SDC2-202ENST00000518385 TERF2Q15554 542 aa20.89■□□□□ 0.93
SDC2-202ENST00000518385 TEX11Q8IYF3 940 aa20.89■□□□□ 0.93
SDC2-202ENST00000518385 JMYQ8N9B5 988 aa20.89■□□□□ 0.93
SDC2-202ENST00000518385 TGFBRAP1Q8WUH2 860 aa20.89■□□□□ 0.93
SDC2-202ENST00000518385 JDP2Q8WYK2 163 aa20.89■□□□□ 0.93
SDC2-202ENST00000518385 ZNF592Q92610 1267 aa20.89■□□□□ 0.93
SDC2-202ENST00000518385 ZDHHC15Q96MV8 337 aa20.89■□□□□ 0.93
SDC2-202ENST00000518385 PCDHA7Q9UN72 937 aa20.89■□□□□ 0.93
SDC2-202ENST00000518385 NAV1Q8NEY1 1877 aa20.89■□□□□ 0.93
SDC2-202ENST00000518385 SPTLC2O15270 562 aa20.88■□□□□ 0.93
SDC2-202ENST00000518385 RAD17O75943 681 aa20.88■□□□□ 0.93
SDC2-202ENST00000518385 MMP1P03956 469 aa20.88■□□□□ 0.93
SDC2-202ENST00000518385 SLFN14P0C7P3 912 aa20.88■□□□□ 0.93
SDC2-202ENST00000518385 CYP2D6P10635 497 aa20.88■□□□□ 0.93
SDC2-202ENST00000518385 H2AFXP16104 143 aaPredicted RBP20.88■□□□□ 0.93
SDC2-202ENST00000518385 CMA1P23946 247 aa20.88■□□□□ 0.93
SDC2-202ENST00000518385 KIF5BP33176 963 aa20.88■□□□□ 0.93
SDC2-202ENST00000518385 CEBPZQ03701 1054 aaKnown RBP20.88■□□□□ 0.93
SDC2-202ENST00000518385 CTCFLQ8NI51 663 aaPredicted RBP20.88■□□□□ 0.93
SDC2-202ENST00000518385 GMLQ99445 158 aa20.88■□□□□ 0.93
SDC2-202ENST00000518385 SYT17Q9BSW7 474 aa20.88■□□□□ 0.93
SDC2-202ENST00000518385 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.88■□□□□ 0.93
SDC2-202ENST00000518385 MKNK2Q9HBH9 465 aa20.88■□□□□ 0.93
SDC2-202ENST00000518385 SERPINA10Q9UK55 444 aa20.88■□□□□ 0.93
SDC2-202ENST00000518385 ECM29Q5VYK3 1845 aa20.87■□□□□ 0.93
SDC2-202ENST00000518385 KIF28PB7ZC32 967 aa20.87■□□□□ 0.93
SDC2-202ENST00000518385 SMIM22K7EJ46 135 aa20.87■□□□□ 0.93
SDC2-202ENST00000518385 SLC39A14Q15043 492 aa20.87■□□□□ 0.93
SDC2-202ENST00000518385 KMT5BQ4FZB7 885 aa20.87■□□□□ 0.93
SDC2-202ENST00000518385 APOBEC3HQ6NTF7 200 aaKnown RBP20.87■□□□□ 0.93
SDC2-202ENST00000518385 ZNF444Q8N0Y2 327 aaPredicted RBP20.87■□□□□ 0.93
SDC2-202ENST00000518385 AIFM3Q96NN9 605 aa20.87■□□□□ 0.93
SDC2-202ENST00000518385 FAM237AA0A1B0GTK4 181 aa20.86■□□□□ 0.93
SDC2-202ENST00000518385 PPP6R2O75170 966 aa20.86■□□□□ 0.93
SDC2-202ENST00000518385 FUT2Q10981 343 aa20.86■□□□□ 0.93
SDC2-202ENST00000518385 TFAP4Q01664 338 aa20.85■□□□□ 0.93
SDC2-202ENST00000518385 RASSF7Q02833 373 aa20.85■□□□□ 0.93
SDC2-202ENST00000518385 CXCL9Q07325 125 aa20.85■□□□□ 0.93
SDC2-202ENST00000518385 TMTC3Q6ZXV5 915 aa20.85■□□□□ 0.93
SDC2-202ENST00000518385 NOSTRINQ8IVI9 506 aa20.85■□□□□ 0.93
SDC2-202ENST00000518385 GJB4Q9NTQ9 266 aa20.85■□□□□ 0.93
SDC2-202ENST00000518385 USP40Q9NVE5 1235 aa20.85■□□□□ 0.93
SDC2-202ENST00000518385 GNAQP50148 359 aa20.85■□□□□ 0.93
SDC2-202ENST00000518385 CDC42EP5Q6NZY7 148 aa20.85■□□□□ 0.93
SDC2-202ENST00000518385 C16orf86Q6ZW13 317 aa20.85■□□□□ 0.93
SDC2-202ENST00000518385 MAPKAPK5Q8IW41 473 aa20.85■□□□□ 0.93
SDC2-202ENST00000518385 AGBL3Q8NEM8 1001 aa20.85■□□□□ 0.93
SDC2-202ENST00000518385 PPP1R13BQ96KQ4 1090 aa20.85■□□□□ 0.93
SDC2-202ENST00000518385 KAT14Q9H8E8 782 aa20.85■□□□□ 0.93
SDC2-202ENST00000518385 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.85■□□□□ 0.93
SDC2-202ENST00000518385 CLIC4Q9Y696 253 aa20.85■□□□□ 0.93
SDC2-202ENST00000518385 CDK5RAP2Q96SN8 1893 aa20.84■□□□□ 0.93
SDC2-202ENST00000518385 USP27XA6NNY8 438 aa20.84■□□□□ 0.93
SDC2-202ENST00000518385 ZSCAN12O43309 604 aa20.84■□□□□ 0.93
SDC2-202ENST00000518385 PRELPP51888 382 aa20.84■□□□□ 0.93
SDC2-202ENST00000518385 RILPL1Q5EBL4 403 aa20.84■□□□□ 0.93
SDC2-202ENST00000518385 FAM47AQ5JRC9 791 aa20.84■□□□□ 0.93
SDC2-202ENST00000518385 CIAPIN1Q6FI81 312 aa20.84■□□□□ 0.93
SDC2-202ENST00000518385 RCSD1Q6JBY9 416 aa20.84■□□□□ 0.93
SDC2-202ENST00000518385 FAM177A1Q8N128 213 aaPredicted RBP20.84■□□□□ 0.93
SDC2-202ENST00000518385 FTOQ9C0B1 505 aaKnown RBP eCLIP20.84■□□□□ 0.937e-7■■□□□ 13
SDC2-202ENST00000518385 TAOK2Q9UL54 1235 aa20.84■□□□□ 0.93
SDC2-202ENST00000518385 DDX60LQ5H9U9 1706 aaKnown RBP20.83■□□□□ 0.93
SDC2-202ENST00000518385 FLT1P17948 1338 aa20.83■□□□□ 0.93
SDC2-202ENST00000518385 TSPY3P0CV98 308 aa20.83■□□□□ 0.92
SDC2-202ENST00000518385 TSPY8P0CW00 308 aa20.83■□□□□ 0.92
SDC2-202ENST00000518385 ETF1P62495 437 aaKnown RBP20.83■□□□□ 0.92
SDC2-202ENST00000518385 TNIP1Q15025 636 aa20.83■□□□□ 0.92
SDC2-202ENST00000518385 E4F1Q66K89 784 aaPredicted RBP20.83■□□□□ 0.92
SDC2-202ENST00000518385 FBXO38Q6PIJ6 1188 aa20.83■□□□□ 0.92
SDC2-202ENST00000518385 DIS3L2Q8IYB7 885 aaKnown RBP20.83■□□□□ 0.92
SDC2-202ENST00000518385 CALCOCO1Q9P1Z2 691 aa20.83■□□□□ 0.92
SDC2-202ENST00000518385 TUBE1Q9UJT0 475 aa20.83■□□□□ 0.92
SDC2-202ENST00000518385 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.83■□□□□ 0.92
SDC2-202ENST00000518385 FOCADQ5VW36 1801 aa20.82■□□□□ 0.92
SDC2-202ENST00000518385 WDHD1O75717 1129 aaPredicted RBP20.82■□□□□ 0.92
SDC2-202ENST00000518385 GUCY1A2P33402 732 aa20.82■□□□□ 0.92
SDC2-202ENST00000518385 RBM5P52756 815 aaKnown RBP eCLIP20.82■□□□□ 0.928e-10■□□□□ 10.2
SDC2-202ENST00000518385 ARHGAP27Q6ZUM4 889 aa20.82■□□□□ 0.92
SDC2-202ENST00000518385 XPO4Q9C0E2 1151 aaKnown RBP20.82■□□□□ 0.92
SDC2-202ENST00000518385 MYH6P13533 1939 aa20.81■□□□□ 0.92
SDC2-202ENST00000518385 FZD9O00144 591 aa20.81■□□□□ 0.92
SDC2-202ENST00000518385 SMC2O95347 1197 aa20.81■□□□□ 0.92
SDC2-202ENST00000518385 PKN1Q16512 942 aa20.81■□□□□ 0.92
SDC2-202ENST00000518385 CFAP100Q494V2 611 aa20.81■□□□□ 0.92
SDC2-202ENST00000518385 TMC6Q7Z403 805 aa20.81■□□□□ 0.92
SDC2-202ENST00000518385 LZTS2Q9BRK4 669 aa20.81■□□□□ 0.92
SDC2-202ENST00000518385 BRMS1Q9HCU9 246 aa20.81■□□□□ 0.92
SDC2-202ENST00000518385 DNAI1Q9UI46 699 aa20.81■□□□□ 0.92
SDC2-202ENST00000518385 HOOK1Q9UJC3 728 aaKnown RBP20.81■□□□□ 0.92
SDC2-202ENST00000518385 HDAC9Q9UKV0 1011 aa20.81■□□□□ 0.92
SDC2-202ENST00000518385 ZBTB12Q9Y330 459 aaPredicted RBP20.81■□□□□ 0.92
SDC2-202ENST00000518385 PCDHAC2Q9Y5I4 1007 aa20.81■□□□□ 0.92
SDC2-202ENST00000518385 ADAMTSL1Q8N6G6 1762 aa20.81■□□□□ 0.92
SDC2-202ENST00000518385 ZNF202O95125 648 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms