RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 GJD4Q96KN9 370 aaPredicted RBP13.57□□□□□ -0.24
PCDHGA6-201ENST00000517434 TCEANC2Q96MN5 208 aa13.57□□□□□ -0.24
PCDHGA6-201ENST00000517434 NBPF3Q9H094 633 aa13.57□□□□□ -0.24
PCDHGA6-201ENST00000517434 PFDN1O60925 122 aa13.56□□□□□ -0.24
PCDHGA6-201ENST00000517434 RASSF2P50749 326 aa13.56□□□□□ -0.24
PCDHGA6-201ENST00000517434 TFAP4Q01664 338 aa13.56□□□□□ -0.24
PCDHGA6-201ENST00000517434 E2F4Q16254 413 aa13.56□□□□□ -0.24
PCDHGA6-201ENST00000517434 LETM2Q2VYF4 491 aa13.56□□□□□ -0.24
PCDHGA6-201ENST00000517434 PHLDB3Q6NSJ2 640 aa13.56□□□□□ -0.24
PCDHGA6-201ENST00000517434 CYP26C1Q6V0L0 522 aa13.56□□□□□ -0.24
PCDHGA6-201ENST00000517434 IWS1Q96ST2 819 aa13.56□□□□□ -0.24
PCDHGA6-201ENST00000517434 KDM2BQ8NHM5 1336 aa13.56□□□□□ -0.24
PCDHGA6-201ENST00000517434 NCAPD2Q15021 1401 aa13.56□□□□□ -0.24
PCDHGA6-201ENST00000517434 GOLGA8KD6RF30 607 aa13.56□□□□□ -0.24
PCDHGA6-201ENST00000517434 ZAP70P43403 619 aa13.56□□□□□ -0.24
PCDHGA6-201ENST00000517434 WDR44Q5JSH3 913 aa13.56□□□□□ -0.24
PCDHGA6-201ENST00000517434 ZBTB21Q9ULJ3 1066 aa13.56□□□□□ -0.24
PCDHGA6-201ENST00000517434 CCT6AP40227 531 aaKnown RBP13.56□□□□□ -0.24
PCDHGA6-201ENST00000517434 MAP7D1Q3KQU3 841 aa13.56□□□□□ -0.24
PCDHGA6-201ENST00000517434 AKNAD1Q5T1N1 836 aa13.56□□□□□ -0.24
PCDHGA6-201ENST00000517434 OTUD6AQ7L8S5 288 aa13.56□□□□□ -0.24
PCDHGA6-201ENST00000517434 DHX36Q9H2U1 1008 aaKnown RBP13.56□□□□□ -0.24
PCDHGA6-201ENST00000517434 TNS3Q68CZ2 1445 aa13.56□□□□□ -0.24
PCDHGA6-201ENST00000517434 H0YCG3 227 aa13.56□□□□□ -0.24
PCDHGA6-201ENST00000517434 NR1I2O75469 434 aa13.56□□□□□ -0.24
PCDHGA6-201ENST00000517434 MCM7P33993 719 aa13.56□□□□□ -0.24
PCDHGA6-201ENST00000517434 DDX27Q96GQ7 796 aaKnown RBP13.56□□□□□ -0.24
PCDHGA6-201ENST00000517434 ZBTB24O43167 697 aaPredicted RBP13.55□□□□□ -0.24
PCDHGA6-201ENST00000517434 ACTN4O43707 911 aaKnown RBP13.55□□□□□ -0.24
PCDHGA6-201ENST00000517434 SMIM24O75264 130 aa13.55□□□□□ -0.24
PCDHGA6-201ENST00000517434 PDE8BO95263 885 aa13.55□□□□□ -0.24
PCDHGA6-201ENST00000517434 STX17P56962 302 aa13.55□□□□□ -0.24
PCDHGA6-201ENST00000517434 MUM1Q2TAK8 710 aa13.55□□□□□ -0.24
PCDHGA6-201ENST00000517434 GADL1Q6ZQY3 521 aa13.55□□□□□ -0.24
PCDHGA6-201ENST00000517434 TAOK1Q7L7X3 1001 aa13.55□□□□□ -0.24
PCDHGA6-201ENST00000517434 CCDC25Q86WR0 208 aa13.55□□□□□ -0.24
PCDHGA6-201ENST00000517434 LARSQ9P2J5 1176 aaKnown RBP13.55□□□□□ -0.24
PCDHGA6-201ENST00000517434 HEG1Q9ULI3 1381 aa13.55□□□□□ -0.24
PCDHGA6-201ENST00000517434 MMP10P09238 476 aa13.55□□□□□ -0.24
PCDHGA6-201ENST00000517434 HNRNPH2P55795 449 aaKnown RBP13.55□□□□□ -0.24
PCDHGA6-201ENST00000517434 MTMR3Q13615 1198 aa13.55□□□□□ -0.24
PCDHGA6-201ENST00000517434 TERF2Q15554 542 aa13.55□□□□□ -0.24
PCDHGA6-201ENST00000517434 RASIP1Q5U651 963 aa13.55□□□□□ -0.24
PCDHGA6-201ENST00000517434 STAG1Q8WVM7 1258 aa13.55□□□□□ -0.24
PCDHGA6-201ENST00000517434 SPON1Q9HCB6 807 aa13.55□□□□□ -0.24
PCDHGA6-201ENST00000517434 KCTD2Q14681 263 aa13.55□□□□□ -0.24
PCDHGA6-201ENST00000517434 MMS22LQ6ZRQ5 1243 aa13.55□□□□□ -0.24
PCDHGA6-201ENST00000517434 FAM212AQ96EL1 285 aa13.55□□□□□ -0.24
PCDHGA6-201ENST00000517434 MTUS1Q9ULD2 1270 aa13.55□□□□□ -0.24
PCDHGA6-201ENST00000517434 ATF5Q9Y2D1 282 aaPredicted RBP13.55□□□□□ -0.24
PCDHGA6-201ENST00000517434 KIF1BO60333 1816 aa13.55□□□□□ -0.24
PCDHGA6-201ENST00000517434 UNC13BO14795 1591 aa13.55□□□□□ -0.24
PCDHGA6-201ENST00000517434 CCT5P48643 541 aa13.55□□□□□ -0.24
PCDHGA6-201ENST00000517434 PDE1CQ14123 709 aaPredicted RBP13.55□□□□□ -0.24
PCDHGA6-201ENST00000517434 DOK7Q18PE1 504 aa13.55□□□□□ -0.24
PCDHGA6-201ENST00000517434 VCX3AQ9NNX9 186 aa13.55□□□□□ -0.24
PCDHGA6-201ENST00000517434 COPRSQ9NQ92 184 aa13.55□□□□□ -0.24
PCDHGA6-201ENST00000517434 TPX2Q9ULW0 747 aaKnown RBP13.55□□□□□ -0.24
PCDHGA6-201ENST00000517434 ZBTB12Q9Y330 459 aaPredicted RBP13.55□□□□□ -0.24
PCDHGA6-201ENST00000517434 NOX5Q96PH1 765 aa13.54□□□□□ -0.24
PCDHGA6-201ENST00000517434 RPS6KB1P23443 525 aa13.54□□□□□ -0.24
PCDHGA6-201ENST00000517434 TPD52P55327 224 aaPredicted RBP13.54□□□□□ -0.24
PCDHGA6-201ENST00000517434 ICA1Q05084 483 aa13.54□□□□□ -0.24
PCDHGA6-201ENST00000517434 GKAP1Q5VSY0 366 aaPredicted RBP13.54□□□□□ -0.24
PCDHGA6-201ENST00000517434 VPS52Q8N1B4 723 aa13.54□□□□□ -0.24
PCDHGA6-201ENST00000517434 SSH3Q8TE77 659 aa13.54□□□□□ -0.24
PCDHGA6-201ENST00000517434 RABGGTAQ92696 567 aa13.54□□□□□ -0.24
PCDHGA6-201ENST00000517434 DHX58Q96C10 678 aa13.54□□□□□ -0.24
PCDHGA6-201ENST00000517434 RAB3IPQ96QF0 476 aaPredicted RBP13.54□□□□□ -0.24
PCDHGA6-201ENST00000517434 PAGR1Q9BTK6 254 aa13.54□□□□□ -0.24
PCDHGA6-201ENST00000517434 COA1Q9GZY4 146 aa13.54□□□□□ -0.24
PCDHGA6-201ENST00000517434 MYO1CO00159 1063 aa13.54□□□□□ -0.24
PCDHGA6-201ENST00000517434 LRRC23Q53EV4 343 aaPredicted RBP13.54□□□□□ -0.24
PCDHGA6-201ENST00000517434 KRT26Q7Z3Y9 468 aa13.54□□□□□ -0.24
PCDHGA6-201ENST00000517434 PNMA3Q9UL41 463 aa13.54□□□□□ -0.24
PCDHGA6-201ENST00000517434 FOSP01100 380 aaPredicted RBP13.54□□□□□ -0.24
PCDHGA6-201ENST00000517434 BTDP43251 543 aa13.54□□□□□ -0.24
PCDHGA6-201ENST00000517434 MAGEA9P43362 315 aa13.54□□□□□ -0.24
PCDHGA6-201ENST00000517434 GRAPQ13588 217 aa13.54□□□□□ -0.24
PCDHGA6-201ENST00000517434 GALNT17Q6IS24 598 aa13.54□□□□□ -0.24
PCDHGA6-201ENST00000517434 GRAPLQ8TC17 118 aaPredicted RBP13.54□□□□□ -0.24
PCDHGA6-201ENST00000517434 CFBP00751 764 aa13.53□□□□□ -0.24
PCDHGA6-201ENST00000517434 PPARAQ07869 468 aa13.53□□□□□ -0.24
PCDHGA6-201ENST00000517434 UBE3CQ15386 1083 aa13.53□□□□□ -0.24
PCDHGA6-201ENST00000517434 CCDC62Q6P9F0 684 aa13.53□□□□□ -0.24
PCDHGA6-201ENST00000517434 ZNF354CQ86Y25 554 aa13.53□□□□□ -0.24
PCDHGA6-201ENST00000517434 PPANQ9NQ55 473 aaKnown RBP13.53□□□□□ -0.24
PCDHGA6-201ENST00000517434 RTEL1Q9NZ71 1219 aa13.53□□□□□ -0.24
PCDHGA6-201ENST00000517434 V9GY48 417 aaPredicted RBP13.53□□□□□ -0.24
PCDHGA6-201ENST00000517434 TCP10L2B9ZVM9 353 aa13.53□□□□□ -0.24
PCDHGA6-201ENST00000517434 EPB41P11171 864 aaKnown RBP13.53□□□□□ -0.24
PCDHGA6-201ENST00000517434 ZNF131P52739 623 aa13.53□□□□□ -0.24
PCDHGA6-201ENST00000517434 TRIM68Q6AZZ1 485 aa13.53□□□□□ -0.24
PCDHGA6-201ENST00000517434 REXO1Q8N1G1 1221 aaKnown RBP13.53□□□□□ -0.24
PCDHGA6-201ENST00000517434 ADD3Q9UEY8 706 aaKnown RBP13.53□□□□□ -0.24
PCDHGA6-201ENST00000517434 KIF1CO43896 1103 aaKnown RBP13.53□□□□□ -0.24
PCDHGA6-201ENST00000517434 ABCB5Q2M3G0 1257 aa13.53□□□□□ -0.24
PCDHGA6-201ENST00000517434 ANKRD35Q8N283 1001 aa13.53□□□□□ -0.24
PCDHGA6-201ENST00000517434 MLXIPQ9HAP2 919 aa13.53□□□□□ -0.24
PCDHGA6-201ENST00000517434 CDC42BPGQ6DT37 1551 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms