RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 CEP95Q96GE4 821 aa27.41■■□□□ 1.98
CLDND1-230ENST00000514537 IVNS1ABPQ9Y6Y0 642 aa27.41■■□□□ 1.98
CLDND1-230ENST00000514537 RLFQ13129 1914 aa27.4■■□□□ 1.98
CLDND1-230ENST00000514537 TFRCP02786 760 aaKnown RBP27.4■■□□□ 1.98
CLDND1-230ENST00000514537 TSPY3P0CV98 308 aa27.4■■□□□ 1.98
CLDND1-230ENST00000514537 TSPY8P0CW00 308 aa27.4■■□□□ 1.98
CLDND1-230ENST00000514537 TFAP4Q01664 338 aa27.4■■□□□ 1.98
CLDND1-230ENST00000514537 NMIQ13287 307 aaPredicted RBP27.4■■□□□ 1.98
CLDND1-230ENST00000514537 CCL14Q16627 93 aa27.4■■□□□ 1.98
CLDND1-230ENST00000514537 FBXO28Q9NVF7 368 aa27.4■■□□□ 1.98
CLDND1-230ENST00000514537 ANAPC4Q9UJX5 808 aa27.4■■□□□ 1.98
CLDND1-230ENST00000514537 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.4■■□□□ 1.98
CLDND1-230ENST00000514537 PLIN4Q96Q06 1357 aa27.39■■□□□ 1.98
CLDND1-230ENST00000514537 STRNO43815 780 aa27.39■■□□□ 1.98
CLDND1-230ENST00000514537 TTLL1O95922 423 aa27.39■■□□□ 1.98
CLDND1-230ENST00000514537 HOXC6P09630 235 aa27.39■■□□□ 1.98
CLDND1-230ENST00000514537 PRKAR2AP13861 404 aaKnown RBP27.39■■□□□ 1.98
CLDND1-230ENST00000514537 ERCC3P19447 782 aa27.39■■□□□ 1.98
CLDND1-230ENST00000514537 SDSP20132 328 aa27.39■■□□□ 1.98
CLDND1-230ENST00000514537 FAM47AQ5JRC9 791 aa27.39■■□□□ 1.98
CLDND1-230ENST00000514537 PPP1R9AQ9ULJ8 1098 aa27.39■■□□□ 1.98
CLDND1-230ENST00000514537 SYNPO2Q9UMS6 1093 aa27.39■■□□□ 1.98
CLDND1-230ENST00000514537 NDUFB10O96000 172 aa27.38■■□□□ 1.97
CLDND1-230ENST00000514537 IRX6P78412 446 aaPredicted RBP27.38■■□□□ 1.97
CLDND1-230ENST00000514537 CTDSPL2Q05D32 466 aa27.38■■□□□ 1.97
CLDND1-230ENST00000514537 PLS1Q14651 629 aa27.38■■□□□ 1.97
CLDND1-230ENST00000514537 TMEM132BQ14DG7 1078 aa27.38■■□□□ 1.97
CLDND1-230ENST00000514537 SAMD1Q6SPF0 538 aaPredicted RBP27.38■■□□□ 1.97
CLDND1-230ENST00000514537 ZNF589Q86UQ0 364 aaPredicted RBP27.38■■□□□ 1.97
CLDND1-230ENST00000514537 VWA5AO00534 786 aa27.37■■□□□ 1.97
CLDND1-230ENST00000514537 FARP2O94887 1054 aaPredicted RBP27.37■■□□□ 1.97
CLDND1-230ENST00000514537 FGAP02671 866 aa27.37■■□□□ 1.97
CLDND1-230ENST00000514537 HSPD1P10809 573 aaKnown RBP27.37■■□□□ 1.97
CLDND1-230ENST00000514537 CACNB2Q08289 660 aaPredicted RBP27.37■■□□□ 1.97
CLDND1-230ENST00000514537 NUP88Q99567 741 aaPredicted RBP27.37■■□□□ 1.97
CLDND1-230ENST00000514537 MROH8Q9H579 483 aa27.37■■□□□ 1.97
CLDND1-230ENST00000514537 INCENPQ9NQS7 918 aa27.37■■□□□ 1.97
CLDND1-230ENST00000514537 TACC3Q9Y6A5 838 aa27.37■■□□□ 1.97
CLDND1-230ENST00000514537 FLRT1Q9NZU1 646 aa27.36■■□□□ 1.97
CLDND1-230ENST00000514537 FGRP09769 529 aa27.35■■□□□ 1.97
CLDND1-230ENST00000514537 NCAPG2Q86XI2 1143 aa27.35■■□□□ 1.97
CLDND1-230ENST00000514537 GMCL1P1Q8NEA9 526 aa27.35■■□□□ 1.97
CLDND1-230ENST00000514537 REPS2Q8NFH8 660 aa27.35■■□□□ 1.97
CLDND1-230ENST00000514537 NPLOC4Q8TAT6 608 aa27.35■■□□□ 1.97
CLDND1-230ENST00000514537 SLF1Q9BQI6 1058 aa27.35■■□□□ 1.97
CLDND1-230ENST00000514537 A0A0G2JMZ2 1700 aa27.35■■□□□ 1.97
CLDND1-230ENST00000514537 CCDC171Q6TFL3 1326 aa27.35■■□□□ 1.97
CLDND1-230ENST00000514537 SLC25A27O95847 323 aa27.34■■□□□ 1.97
CLDND1-230ENST00000514537 ADORA2AP29274 412 aa27.34■■□□□ 1.97
CLDND1-230ENST00000514537 RIOX2Q8IUF8 465 aa27.34■■□□□ 1.97
CLDND1-230ENST00000514537 ABRAQ8N0Z2 381 aa27.34■■□□□ 1.97
CLDND1-230ENST00000514537 LRRC47Q8N1G4 583 aaKnown RBP27.34■■□□□ 1.97
CLDND1-230ENST00000514537 ORC4O43929 436 aa27.33■■□□□ 1.97
CLDND1-230ENST00000514537 IGHA2P01877 340 aa27.33■■□□□ 1.97
CLDND1-230ENST00000514537 MFSD14CQ5VZR4 134 aa27.33■■□□□ 1.97
CLDND1-230ENST00000514537 DPP9Q86TI2 863 aa27.33■■□□□ 1.97
CLDND1-230ENST00000514537 ZNF214Q9UL59 606 aaPredicted RBP27.33■■□□□ 1.97
CLDND1-230ENST00000514537 ZMYM6O95789 1325 aa27.33■■□□□ 1.97
CLDND1-230ENST00000514537 TSPY2A6NKD2 308 aa27.32■■□□□ 1.96
CLDND1-230ENST00000514537 PDE4AP27815 886 aa27.32■■□□□ 1.96
CLDND1-230ENST00000514537 STAT3P40763 770 aa27.32■■□□□ 1.96
CLDND1-230ENST00000514537 PPP4R3BQ5MIZ7 849 aa27.32■■□□□ 1.96
CLDND1-230ENST00000514537 ANKLE1Q8NAG6 615 aa27.32■■□□□ 1.96
CLDND1-230ENST00000514537 PRPF38AQ8NAV1 312 aaKnown RBP27.32■■□□□ 1.96
CLDND1-230ENST00000514537 HTATIP2Q9BUP3 242 aa27.32■■□□□ 1.96
CLDND1-230ENST00000514537 IL17RBQ9NRM6 502 aa27.32■■□□□ 1.96
CLDND1-230ENST00000514537 OGDHLQ9ULD0 1010 aa27.32■■□□□ 1.96
CLDND1-230ENST00000514537 COBLO75128 1261 aa27.31■■□□□ 1.96
CLDND1-230ENST00000514537 CCND3P30281 292 aaPredicted RBP27.31■■□□□ 1.96
CLDND1-230ENST00000514537 MFAP1P55081 439 aaKnown RBP27.31■■□□□ 1.96
CLDND1-230ENST00000514537 SLFN13Q68D06 897 aa27.31■■□□□ 1.96
CLDND1-230ENST00000514537 HIP1O00291 1037 aa27.3■■□□□ 1.96
CLDND1-230ENST00000514537 RANBP6O60518 1105 aaKnown RBP27.3■■□□□ 1.96
CLDND1-230ENST00000514537 FCER1AP12319 257 aa27.3■■□□□ 1.96
CLDND1-230ENST00000514537 OLFML2BQ68BL8 750 aa27.3■■□□□ 1.96
CLDND1-230ENST00000514537 DPF3Q92784 378 aa27.3■■□□□ 1.96
CLDND1-230ENST00000514537 FEM1BQ9UK73 627 aa27.3■■□□□ 1.96
CLDND1-230ENST00000514537 NMT2O60551 498 aa27.29■■□□□ 1.96
CLDND1-230ENST00000514537 COPB2P35606 906 aa27.29■■□□□ 1.96
CLDND1-230ENST00000514537 NOVP48745 357 aa27.29■■□□□ 1.96
CLDND1-230ENST00000514537 MNX1P50219 401 aaPredicted RBP27.29■■□□□ 1.96
CLDND1-230ENST00000514537 LHX8Q68G74 356 aa27.29■■□□□ 1.96
CLDND1-230ENST00000514537 CWC27Q6UX04 472 aaKnown RBP27.29■■□□□ 1.96
CLDND1-230ENST00000514537 PAWRQ96IZ0 340 aaKnown RBP27.29■■□□□ 1.96
CLDND1-230ENST00000514537 DIAPH3Q9NSV4 1193 aa27.29■■□□□ 1.96
CLDND1-230ENST00000514537 SLC5A4Q9NY91 659 aa27.29■■□□□ 1.96
CLDND1-230ENST00000514537 STX8Q9UNK0 236 aa27.29■■□□□ 1.96
CLDND1-230ENST00000514537 PARP14Q460N5 1801 aa27.29■■□□□ 1.96
CLDND1-230ENST00000514537 BMP3P12645 472 aa27.28■■□□□ 1.96
CLDND1-230ENST00000514537 CYP2C19P33261 490 aa27.28■■□□□ 1.96
CLDND1-230ENST00000514537 DIS3LQ8TF46 1054 aaKnown RBP27.28■■□□□ 1.96
CLDND1-230ENST00000514537 NECAB2Q7Z6G3 386 aa27.27■■□□□ 1.96
CLDND1-230ENST00000514537 KIFC2Q96AC6 838 aa27.27■■□□□ 1.96
CLDND1-230ENST00000514537 GMCL1Q96IK5 515 aa27.27■■□□□ 1.96
CLDND1-230ENST00000514537 TEX13BQ9BXU2 312 aa27.27■■□□□ 1.96
CLDND1-230ENST00000514537 ATP2A1O14983 1001 aa27.26■■□□□ 1.95
CLDND1-230ENST00000514537 ZBED4O75132 1171 aa27.26■■□□□ 1.95
CLDND1-230ENST00000514537 HAND2P61296 217 aa27.26■■□□□ 1.95
CLDND1-230ENST00000514537 MMP19Q99542 508 aa27.26■■□□□ 1.95
CLDND1-230ENST00000514537 NBPF3Q9H094 633 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms