RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 CCL5P13501 91 aa25.24■■□□□ 1.63
UBE2D3-229ENST00000510129 ELNP15502 786 aa25.24■■□□□ 1.63
UBE2D3-229ENST00000510129 COPB2P35606 906 aa25.24■■□□□ 1.63
UBE2D3-229ENST00000510129 MORN1Q5T089 497 aa25.24■■□□□ 1.63
UBE2D3-229ENST00000510129 FAM83BQ5T0W9 1011 aa25.24■■□□□ 1.63
UBE2D3-229ENST00000510129 MFSD6Q6ZSS7 791 aa25.24■■□□□ 1.63
UBE2D3-229ENST00000510129 RNF208Q9H0X6 261 aa25.24■■□□□ 1.63
UBE2D3-229ENST00000510129 TOMM22Q9NS69 142 aa25.24■■□□□ 1.63
UBE2D3-229ENST00000510129 PPP1R9AQ9ULJ8 1098 aa25.24■■□□□ 1.63
UBE2D3-229ENST00000510129 RLFQ13129 1914 aa25.24■■□□□ 1.63
UBE2D3-229ENST00000510129 ZNF213O14771 459 aa25.23■■□□□ 1.63
UBE2D3-229ENST00000510129 PEX10O60683 326 aa25.23■■□□□ 1.63
UBE2D3-229ENST00000510129 SLC25A27O95847 323 aa25.23■■□□□ 1.63
UBE2D3-229ENST00000510129 GJB1P08034 283 aa25.23■■□□□ 1.63
UBE2D3-229ENST00000510129 GSPT1P15170 499 aaKnown RBP25.23■■□□□ 1.63
UBE2D3-229ENST00000510129 WDR78Q5VTH9 848 aa25.23■■□□□ 1.63
UBE2D3-229ENST00000510129 ATG4CQ96DT6 458 aa25.23■■□□□ 1.63
UBE2D3-229ENST00000510129 APBA2Q99767 749 aa25.23■■□□□ 1.63
UBE2D3-229ENST00000510129 SLF1Q9BQI6 1058 aa25.23■■□□□ 1.63
UBE2D3-229ENST00000510129 MYCP01106 439 aaPredicted RBP25.22■■□□□ 1.63
UBE2D3-229ENST00000510129 CYP2B6P20813 491 aa25.22■■□□□ 1.63
UBE2D3-229ENST00000510129 MAP2K5Q13163 448 aa25.22■■□□□ 1.63
UBE2D3-229ENST00000510129 AKNAD1Q5T1N1 836 aa25.22■■□□□ 1.63
UBE2D3-229ENST00000510129 PRPF38AQ8NAV1 312 aaKnown RBP25.22■■□□□ 1.63
UBE2D3-229ENST00000510129 STAG1Q8WVM7 1258 aa25.22■■□□□ 1.63
UBE2D3-229ENST00000510129 USP6NLQ92738 828 aa25.22■■□□□ 1.63
UBE2D3-229ENST00000510129 MOV10L1Q9BXT6 1211 aaKnown RBP25.22■■□□□ 1.63
UBE2D3-229ENST00000510129 SLC5A4Q9NY91 659 aa25.22■■□□□ 1.63
UBE2D3-229ENST00000510129 STX8Q9UNK0 236 aa25.22■■□□□ 1.63
UBE2D3-229ENST00000510129 DOCK3Q8IZD9 2030 aa25.22■■□□□ 1.63
UBE2D3-229ENST00000510129 PARP14Q460N5 1801 aa25.21■■□□□ 1.63
UBE2D3-229ENST00000510129 ZKSCAN1P17029 563 aaPredicted RBP25.21■■□□□ 1.63
UBE2D3-229ENST00000510129 PTPREP23469 700 aa25.21■■□□□ 1.63
UBE2D3-229ENST00000510129 PLS1Q14651 629 aa25.21■■□□□ 1.63
UBE2D3-229ENST00000510129 MTFR1Q15390 333 aa25.21■■□□□ 1.63
UBE2D3-229ENST00000510129 ABRAQ8N0Z2 381 aa25.21■■□□□ 1.63
UBE2D3-229ENST00000510129 TCP11L1Q9NUJ3 509 aa25.21■■□□□ 1.63
UBE2D3-229ENST00000510129 FEM1BQ9UK73 627 aa25.21■■□□□ 1.63
UBE2D3-229ENST00000510129 VWA5AO00534 786 aa25.2■■□□□ 1.62
UBE2D3-229ENST00000510129 FDX1P10109 184 aa25.2■■□□□ 1.62
UBE2D3-229ENST00000510129 EN2P19622 333 aaPredicted RBP25.2■■□□□ 1.62
UBE2D3-229ENST00000510129 GJA8P48165 433 aa25.2■■□□□ 1.62
UBE2D3-229ENST00000510129 GRB14Q14449 540 aa25.2■■□□□ 1.62
UBE2D3-229ENST00000510129 IMMTQ16891 758 aaKnown RBP25.2■■□□□ 1.62
UBE2D3-229ENST00000510129 SLFN13Q68D06 897 aa25.2■■□□□ 1.62
UBE2D3-229ENST00000510129 GMCL1Q96IK5 515 aa25.2■■□□□ 1.62
UBE2D3-229ENST00000510129 PLXNB2O15031 1838 aa25.2■■□□□ 1.62
UBE2D3-229ENST00000510129 HOXC6P09630 235 aa25.19■■□□□ 1.62
UBE2D3-229ENST00000510129 RRP12Q5JTH9 1297 aaKnown RBP25.19■■□□□ 1.62
UBE2D3-229ENST00000510129 SAMD1Q6SPF0 538 aaPredicted RBP25.19■■□□□ 1.62
UBE2D3-229ENST00000510129 LRRC47Q8N1G4 583 aaKnown RBP25.19■■□□□ 1.62
UBE2D3-229ENST00000510129 ESR2Q92731 530 aa25.19■■□□□ 1.62
UBE2D3-229ENST00000510129 CTDP1Q9Y5B0 961 aaPredicted RBP25.19■■□□□ 1.62
UBE2D3-229ENST00000510129 HTTP42858 3142 aa25.19■■□□□ 1.62
UBE2D3-229ENST00000510129 RPTORQ8N122 1335 aa25.18■■□□□ 1.62
UBE2D3-229ENST00000510129 BMP3P12645 472 aa25.18■■□□□ 1.62
UBE2D3-229ENST00000510129 ERCC3P19447 782 aa25.18■■□□□ 1.62
UBE2D3-229ENST00000510129 NOVP48745 357 aa25.18■■□□□ 1.62
UBE2D3-229ENST00000510129 HAND2P61296 217 aa25.18■■□□□ 1.62
UBE2D3-229ENST00000510129 CCDC178Q5BJE1 867 aa25.18■■□□□ 1.62
UBE2D3-229ENST00000510129 CHURC1Q8WUH1 139 aa25.18■■□□□ 1.62
UBE2D3-229ENST00000510129 TTC14Q96N46 770 aa25.18■■□□□ 1.62
UBE2D3-229ENST00000510129 UNC93B1Q9H1C4 597 aa25.18■■□□□ 1.62
UBE2D3-229ENST00000510129 HMX1Q9NP08 348 aaPredicted RBP25.18■■□□□ 1.62
UBE2D3-229ENST00000510129 IL17RBQ9NRM6 502 aa25.18■■□□□ 1.62
UBE2D3-229ENST00000510129 FBXO28Q9NVF7 368 aa25.18■■□□□ 1.62
UBE2D3-229ENST00000510129 ZNF236Q9UL36 1845 aa25.18■■□□□ 1.62
UBE2D3-229ENST00000510129 LAMA4Q16363 1823 aa25.17■■□□□ 1.62
UBE2D3-229ENST00000510129 ZBED4O75132 1171 aa25.17■■□□□ 1.62
UBE2D3-229ENST00000510129 STAT3P40763 770 aa25.17■■□□□ 1.62
UBE2D3-229ENST00000510129 SLC1A4P43007 532 aa25.17■■□□□ 1.62
UBE2D3-229ENST00000510129 TMEM132BQ14DG7 1078 aa25.17■■□□□ 1.62
UBE2D3-229ENST00000510129 FAM160B2Q86V87 743 aa25.17■■□□□ 1.62
UBE2D3-229ENST00000510129 NCAPG2Q86XI2 1143 aa25.17■■□□□ 1.62
UBE2D3-229ENST00000510129 RIOX2Q8IUF8 465 aa25.17■■□□□ 1.62
UBE2D3-229ENST00000510129 TRIB2Q92519 343 aa25.17■■□□□ 1.62
UBE2D3-229ENST00000510129 NUP88Q99567 741 aaPredicted RBP25.17■■□□□ 1.62
UBE2D3-229ENST00000510129 INCENPQ9NQS7 918 aa25.17■■□□□ 1.62
UBE2D3-229ENST00000510129 PAK6Q9NQU5 681 aaPredicted RBP25.17■■□□□ 1.62
UBE2D3-229ENST00000510129 ATP2A1O14983 1001 aa25.16■■□□□ 1.62
UBE2D3-229ENST00000510129 SGPL1O95470 568 aa25.16■■□□□ 1.62
UBE2D3-229ENST00000510129 NEFLP07196 543 aa25.16■■□□□ 1.62
UBE2D3-229ENST00000510129 CHMLP26374 656 aa25.16■■□□□ 1.62
UBE2D3-229ENST00000510129 OAZ1P54368 228 aa25.16■■□□□ 1.62
UBE2D3-229ENST00000510129 DPP9Q86TI2 863 aa25.16■■□□□ 1.62
UBE2D3-229ENST00000510129 U2AF1L4Q8WU68 220 aaKnown RBP25.16■■□□□ 1.62
UBE2D3-229ENST00000510129 TEX13BQ9BXU2 312 aa25.16■■□□□ 1.62
UBE2D3-229ENST00000510129 CNNM2Q9H8M5 875 aa25.16■■□□□ 1.62
UBE2D3-229ENST00000510129 KIAA0100Q14667 2235 aaKnown RBP25.15■■□□□ 1.62
UBE2D3-229ENST00000510129 PLA2G6O60733 806 aa25.15■■□□□ 1.62
UBE2D3-229ENST00000510129 TOP1P11387 765 aaKnown RBP25.15■■□□□ 1.62
UBE2D3-229ENST00000510129 FCER1AP12319 257 aa25.15■■□□□ 1.62
UBE2D3-229ENST00000510129 STAT2P52630 851 aa25.15■■□□□ 1.62
UBE2D3-229ENST00000510129 MFSD14CQ5VZR4 134 aa25.15■■□□□ 1.62
UBE2D3-229ENST00000510129 RCSD1Q6JBY9 416 aa25.15■■□□□ 1.62
UBE2D3-229ENST00000510129 IQCA1Q86XH1 822 aa25.15■■□□□ 1.62
UBE2D3-229ENST00000510129 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.15■■□□□ 1.622e-17■■□□□ 14.3
UBE2D3-229ENST00000510129 MAP3K21Q5TCX8 1036 aa25.14■■□□□ 1.62
UBE2D3-229ENST00000510129 TBC1D10CQ8IV04 446 aa25.14■■□□□ 1.62
UBE2D3-229ENST00000510129 DCAF4Q8WV16 495 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms